RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
SFXN3-207ENST00000489434 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
SFXN3-207ENST00000489434 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
SFXN3-207ENST00000489434 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
SFXN3-207ENST00000489434 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
SFXN3-207ENST00000489434 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
SFXN3-207ENST00000489434 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
SFXN3-207ENST00000489434 BAG6P46379 1132 aa17.36■□□□□ 0.37
SFXN3-207ENST00000489434 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
SFXN3-207ENST00000489434 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
SFXN3-207ENST00000489434 ARHGEF28Q8N1W1 1705 aaKnown RBP17.34■□□□□ 0.37
SFXN3-207ENST00000489434 SPATA31A5Q5VU36 1347 aa17.33■□□□□ 0.36
SFXN3-207ENST00000489434 SPATA31A7Q8IWB4 1347 aa17.33■□□□□ 0.36
SFXN3-207ENST00000489434 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
SFXN3-207ENST00000489434 ATP7BP35670 1465 aa17.31■□□□□ 0.36
SFXN3-207ENST00000489434 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
SFXN3-207ENST00000489434 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
SFXN3-207ENST00000489434 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
SFXN3-207ENST00000489434 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
SFXN3-207ENST00000489434 ACEP12821 1306 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 EVA1CP58658 441 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
SFXN3-207ENST00000489434 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
SFXN3-207ENST00000489434 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.35
SFXN3-207ENST00000489434 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
SFXN3-207ENST00000489434 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
SFXN3-207ENST00000489434 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
SFXN3-207ENST00000489434 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
SFXN3-207ENST00000489434 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
SFXN3-207ENST00000489434 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
SFXN3-207ENST00000489434 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
SFXN3-207ENST00000489434 EN1Q05925 392 aaPredicted RBP17.24■□□□□ 0.35
SFXN3-207ENST00000489434 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
SFXN3-207ENST00000489434 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
SFXN3-207ENST00000489434 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
SFXN3-207ENST00000489434 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
SFXN3-207ENST00000489434 LRP5O75197 1615 aa17.22■□□□□ 0.35
SFXN3-207ENST00000489434 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
SFXN3-207ENST00000489434 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
SFXN3-207ENST00000489434 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.35
SFXN3-207ENST00000489434 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
SFXN3-207ENST00000489434 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
SFXN3-207ENST00000489434 DISP2A7MBM2 1401 aa17.21■□□□□ 0.34
SFXN3-207ENST00000489434 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
SFXN3-207ENST00000489434 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
SFXN3-207ENST00000489434 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
SFXN3-207ENST00000489434 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
SFXN3-207ENST00000489434 CPDO75976 1380 aa17.19■□□□□ 0.34
SFXN3-207ENST00000489434 TRIM37O94972 964 aa17.19■□□□□ 0.34
SFXN3-207ENST00000489434 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
SFXN3-207ENST00000489434 USP19O94966 1318 aa17.18■□□□□ 0.34
SFXN3-207ENST00000489434 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
SFXN3-207ENST00000489434 GCP02774 474 aa17.17■□□□□ 0.34
SFXN3-207ENST00000489434 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
SFXN3-207ENST00000489434 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
SFXN3-207ENST00000489434 NRKQ7Z2Y5 1582 aa17.17■□□□□ 0.34
SFXN3-207ENST00000489434 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
SFXN3-207ENST00000489434 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
SFXN3-207ENST00000489434 APBA3O96018 575 aa17.16■□□□□ 0.34
SFXN3-207ENST00000489434 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
SFXN3-207ENST00000489434 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
SFXN3-207ENST00000489434 EZH2Q15910 746 aaKnown RBP17.15■□□□□ 0.34
SFXN3-207ENST00000489434 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
SFXN3-207ENST00000489434 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-207ENST00000489434 NLRP6P59044 892 aa17.14■□□□□ 0.33
SFXN3-207ENST00000489434 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
SFXN3-207ENST00000489434 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SFXN3-207ENST00000489434 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
SFXN3-207ENST00000489434 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
SFXN3-207ENST00000489434 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
SFXN3-207ENST00000489434 USP6P35125 1406 aa17.12■□□□□ 0.33
SFXN3-207ENST00000489434 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
SFXN3-207ENST00000489434 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
SFXN3-207ENST00000489434 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
SFXN3-207ENST00000489434 CRB1P82279 1406 aa17.1■□□□□ 0.33
SFXN3-207ENST00000489434 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
SFXN3-207ENST00000489434 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
SFXN3-207ENST00000489434 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SFXN3-207ENST00000489434 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
SFXN3-207ENST00000489434 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
SFXN3-207ENST00000489434 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 DDB1Q16531 1140 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
SFXN3-207ENST00000489434 SLIT3O75094 1523 aa17.05■□□□□ 0.32
SFXN3-207ENST00000489434 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
SFXN3-207ENST00000489434 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
SFXN3-207ENST00000489434 RREB1Q92766 1687 aa17.04■□□□□ 0.32
SFXN3-207ENST00000489434 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
SFXN3-207ENST00000489434 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
SFXN3-207ENST00000489434 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
SFXN3-207ENST00000489434 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
SFXN3-207ENST00000489434 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
SFXN3-207ENST00000489434 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
SFXN3-207ENST00000489434 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms