RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
CD40-206ENST00000489304 USP6P35125 1406 aa24.16■■□□□ 1.46
CD40-206ENST00000489304 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
CD40-206ENST00000489304 PHF8Q9UPP1 1060 aa24.14■■□□□ 1.45
CD40-206ENST00000489304 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
CD40-206ENST00000489304 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
CD40-206ENST00000489304 ESCO1Q5FWF5 840 aa24.13■■□□□ 1.45
CD40-206ENST00000489304 ORAI2Q96SN7 254 aa24.13■■□□□ 1.45
CD40-206ENST00000489304 SSH2Q76I76 1423 aa24.13■■□□□ 1.45
CD40-206ENST00000489304 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
CD40-206ENST00000489304 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
CD40-206ENST00000489304 LRRC7Q96NW7 1537 aa24.12■■□□□ 1.45
CD40-206ENST00000489304 NCOA3Q9Y6Q9 1424 aa24.12■■□□□ 1.45
CD40-206ENST00000489304 FBLN1P23142 703 aa24.11■■□□□ 1.45
CD40-206ENST00000489304 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
CD40-206ENST00000489304 MTHFSP49914 203 aa24.1■■□□□ 1.45
CD40-206ENST00000489304 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
CD40-206ENST00000489304 C1orf167Q5SNV9 1468 aa24.09■■□□□ 1.45
CD40-206ENST00000489304 ATF3P18847 181 aa24.08■■□□□ 1.45
CD40-206ENST00000489304 SENP3-EIF4A1A0A087X0R7 540 aa24.07■■□□□ 1.44
CD40-206ENST00000489304 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
CD40-206ENST00000489304 MST1RQ04912 1400 aa24.07■■□□□ 1.44
CD40-206ENST00000489304 COG3Q96JB2 828 aa24.06■■□□□ 1.44
CD40-206ENST00000489304 MSH6P52701 1360 aa24.05■■□□□ 1.44
CD40-206ENST00000489304 DCCP43146 1447 aa24.05■■□□□ 1.44
CD40-206ENST00000489304 MAP2P11137 1827 aaKnown RBP24.04■■□□□ 1.44
CD40-206ENST00000489304 TTC21AQ8NDW8 1320 aa24.03■■□□□ 1.44
CD40-206ENST00000489304 OVOS2A0A0J9YW53 1432 aa24.02■■□□□ 1.44
CD40-206ENST00000489304 OVOS2Q6IE36 1432 aa24.02■■□□□ 1.44
CD40-206ENST00000489304 FOXO3O43524 673 aa24.01■■□□□ 1.43
CD40-206ENST00000489304 CADPS2Q86UW7 1296 aa24.01■■□□□ 1.43
CD40-206ENST00000489304 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
CD40-206ENST00000489304 XPCQ01831 940 aaPredicted RBP24.01■■□□□ 1.43
CD40-206ENST00000489304 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
CD40-206ENST00000489304 PAK3O75914 559 aaPredicted RBP24■■□□□ 1.43
CD40-206ENST00000489304 PSME1Q06323 249 aa24■■□□□ 1.43
CD40-206ENST00000489304 POLKQ9UBT6 870 aa24■■□□□ 1.43
CD40-206ENST00000489304 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
CD40-206ENST00000489304 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
CD40-206ENST00000489304 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
CD40-206ENST00000489304 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
CD40-206ENST00000489304 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
CD40-206ENST00000489304 RRS1Q15050 365 aaKnown RBP23.97■■□□□ 1.43
CD40-206ENST00000489304 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
CD40-206ENST00000489304 USP31Q70CQ4 1352 aa23.97■■□□□ 1.43
CD40-206ENST00000489304 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
CD40-206ENST00000489304 PPM1GO15355 546 aaPredicted RBP23.95■■□□□ 1.42
CD40-206ENST00000489304 SOX12O15370 315 aa23.95■■□□□ 1.42
CD40-206ENST00000489304 NLRP6P59044 892 aa23.95■■□□□ 1.42
CD40-206ENST00000489304 KRT28Q7Z3Y7 464 aa23.94■■□□□ 1.42
CD40-206ENST00000489304 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
CD40-206ENST00000489304 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
CD40-206ENST00000489304 KIF1AQ12756 1690 aa23.93■■□□□ 1.42
CD40-206ENST00000489304 USP54Q70EL1 1684 aa23.93■■□□□ 1.42
CD40-206ENST00000489304 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
CD40-206ENST00000489304 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
CD40-206ENST00000489304 SALL2Q9Y467 1007 aaPredicted RBP23.91■■□□□ 1.42
CD40-206ENST00000489304 CDK12Q9NYV4 1490 aaPredicted RBP23.91■■□□□ 1.42
CD40-206ENST00000489304 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
CD40-206ENST00000489304 LTBP4Q8N2S1 1624 aa23.9■■□□□ 1.42
CD40-206ENST00000489304 BRINP3Q76B58 766 aa23.9■■□□□ 1.42
CD40-206ENST00000489304 SLAIN2Q9P270 581 aa23.9■■□□□ 1.42
CD40-206ENST00000489304 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
CD40-206ENST00000489304 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
CD40-206ENST00000489304 APAF1O14727 1248 aa23.87■■□□□ 1.41
CD40-206ENST00000489304 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
CD40-206ENST00000489304 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
CD40-206ENST00000489304 IQSEC2Q5JU85 1478 aa23.86■■□□□ 1.41
CD40-206ENST00000489304 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
CD40-206ENST00000489304 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
CD40-206ENST00000489304 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
CD40-206ENST00000489304 SUPT16HQ9Y5B9 1047 aaKnown RBP23.86■■□□□ 1.41
CD40-206ENST00000489304 U2SURPO15042 1029 aaKnown RBP23.85■■□□□ 1.41
CD40-206ENST00000489304 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
CD40-206ENST00000489304 LMOD2Q6P5Q4 547 aa23.85■■□□□ 1.41
CD40-206ENST00000489304 MAP3K19Q56UN5 1328 aa23.85■■□□□ 1.41
CD40-206ENST00000489304 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
CD40-206ENST00000489304 NPHP3Q7Z494 1330 aa23.83■■□□□ 1.4
CD40-206ENST00000489304 NEFLP07196 543 aa23.81■■□□□ 1.4
CD40-206ENST00000489304 IL13P35225 146 aa23.81■■□□□ 1.4
CD40-206ENST00000489304 NCBP3Q53F19 620 aaKnown RBP23.81■■□□□ 1.4
CD40-206ENST00000489304 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
CD40-206ENST00000489304 PXDNQ92626 1479 aa23.81■■□□□ 1.4
CD40-206ENST00000489304 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
CD40-206ENST00000489304 TCP11L2Q8N4U5 519 aa23.79■■□□□ 1.4
CD40-206ENST00000489304 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
CD40-206ENST00000489304 PLEKHF1Q96S99 279 aa23.78■■□□□ 1.4
CD40-206ENST00000489304 ALS2Q96Q42 1657 aa23.78■■□□□ 1.4
CD40-206ENST00000489304 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
CD40-206ENST00000489304 EIF4A2Q14240 407 aaKnown RBP23.77■■□□□ 1.4
CD40-206ENST00000489304 FKBP8Q14318 412 aa23.77■■□□□ 1.4
CD40-206ENST00000489304 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
CD40-206ENST00000489304 NFAT5O94916 1531 aa23.77■■□□□ 1.4
CD40-206ENST00000489304 AMPHP49418 695 aa23.76■■□□□ 1.39
CD40-206ENST00000489304 FCHSD2O94868 740 aa23.76■■□□□ 1.39
CD40-206ENST00000489304 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
CD40-206ENST00000489304 USP19O94966 1318 aa23.76■■□□□ 1.39
CD40-206ENST00000489304 SLIT3O75094 1523 aa23.75■■□□□ 1.39
CD40-206ENST00000489304 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
CD40-206ENST00000489304 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms