RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
CBWD1-216ENST00000489272 PLEKHG3A1L390 1219 aa9.84□□□□□ -0.83
CBWD1-216ENST00000489272 SH3BP2P78314 561 aa9.84□□□□□ -0.83
CBWD1-216ENST00000489272 PTCRAQ6ISU1 281 aaPredicted RBP9.84□□□□□ -0.83
CBWD1-216ENST00000489272 MPNDQ8N594 471 aa9.84□□□□□ -0.83
CBWD1-216ENST00000489272 NANOS1Q8WY41 292 aaKnown RBP9.84□□□□□ -0.83
CBWD1-216ENST00000489272 BTBD11A6QL63 1104 aa9.82□□□□□ -0.84
CBWD1-216ENST00000489272 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
CBWD1-216ENST00000489272 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
CBWD1-216ENST00000489272 DNMT3LQ9UJW3 386 aa9.8□□□□□ -0.84
CBWD1-216ENST00000489272 JUNDP17535 347 aa9.79□□□□□ -0.84
CBWD1-216ENST00000489272 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
CBWD1-216ENST00000489272 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-216ENST00000489272 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.85
CBWD1-216ENST00000489272 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
CBWD1-216ENST00000489272 BMP2P12643 396 aa9.75□□□□□ -0.85
CBWD1-216ENST00000489272 VARSP26640 1264 aaKnown RBP9.75□□□□□ -0.85
CBWD1-216ENST00000489272 ZIC2O95409 532 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-216ENST00000489272 LYPD4Q6UWN0 246 aa9.74□□□□□ -0.85
CBWD1-216ENST00000489272 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CBWD1-216ENST00000489272 UPP2O95045 317 aa9.73□□□□□ -0.85
CBWD1-216ENST00000489272 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
CBWD1-216ENST00000489272 PTSQ03393 145 aa9.73□□□□□ -0.85
CBWD1-216ENST00000489272 HIC1Q14526 733 aa9.73□□□□□ -0.85
CBWD1-216ENST00000489272 BAG6P46379 1132 aa9.72□□□□□ -0.85
CBWD1-216ENST00000489272 PLCB2Q00722 1185 aa9.72□□□□□ -0.85
CBWD1-216ENST00000489272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CBWD1-216ENST00000489272 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
CBWD1-216ENST00000489272 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
CBWD1-216ENST00000489272 KCNV2Q8TDN2 545 aa9.7□□□□□ -0.86
CBWD1-216ENST00000489272 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
CBWD1-216ENST00000489272 ADAMTS2O95450 1211 aa9.69□□□□□ -0.86
CBWD1-216ENST00000489272 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
CBWD1-216ENST00000489272 CCDC155Q8N6L0 562 aa9.68□□□□□ -0.86
CBWD1-216ENST00000489272 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
CBWD1-216ENST00000489272 KDM4AO75164 1064 aa9.67□□□□□ -0.86
CBWD1-216ENST00000489272 CELA2BP08218 269 aaPredicted RBP9.67□□□□□ -0.86
CBWD1-216ENST00000489272 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
CBWD1-216ENST00000489272 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
CBWD1-216ENST00000489272 MEIOBQ8N635 442 aa9.67□□□□□ -0.86
CBWD1-216ENST00000489272 HLA-CQ95604 372 aa9.67□□□□□ -0.86
CBWD1-216ENST00000489272 FURINP09958 794 aa9.66□□□□□ -0.86
CBWD1-216ENST00000489272 KRTAP19-1Q8IUB9 90 aa9.66□□□□□ -0.86
CBWD1-216ENST00000489272 VWA5B2Q8N398 1253 aa9.66□□□□□ -0.86
CBWD1-216ENST00000489272 BEND7Q8N7W2 519 aaPredicted RBP9.66□□□□□ -0.86
CBWD1-216ENST00000489272 BAP1Q92560 729 aa9.66□□□□□ -0.86
CBWD1-216ENST00000489272 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
CBWD1-216ENST00000489272 ZNF511Q8NB15 262 aa9.65□□□□□ -0.86
CBWD1-216ENST00000489272 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
CBWD1-216ENST00000489272 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
CBWD1-216ENST00000489272 SRSF11Q05519 484 aaKnown RBP9.64□□□□□ -0.87
CBWD1-216ENST00000489272 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
CBWD1-216ENST00000489272 CD46P15529 392 aa9.63□□□□□ -0.87
CBWD1-216ENST00000489272 USP46P62068 366 aa9.63□□□□□ -0.87
CBWD1-216ENST00000489272 PHOX2BQ99453 314 aa9.63□□□□□ -0.87
CBWD1-216ENST00000489272 TTLL8A6PVC2 850 aa9.62□□□□□ -0.87
CBWD1-216ENST00000489272 ITGA6P23229 1130 aa9.62□□□□□ -0.87
CBWD1-216ENST00000489272 PODNQ7Z5L7 613 aa9.62□□□□□ -0.87
CBWD1-216ENST00000489272 CDC14CA4D256 554 aa9.61□□□□□ -0.87
CBWD1-216ENST00000489272 NR3C2P08235 984 aa9.61□□□□□ -0.87
CBWD1-216ENST00000489272 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
CBWD1-216ENST00000489272 SLC35F4A4IF30 521 aa9.6□□□□□ -0.87
CBWD1-216ENST00000489272 NR5A1Q13285 461 aa9.6□□□□□ -0.87
CBWD1-216ENST00000489272 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
CBWD1-216ENST00000489272 SPTLC1O15269 473 aa9.59□□□□□ -0.87
CBWD1-216ENST00000489272 RETREG3Q86VR2 466 aa9.59□□□□□ -0.87
CBWD1-216ENST00000489272 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
CBWD1-216ENST00000489272 GNPATO15228 680 aa9.58□□□□□ -0.88
CBWD1-216ENST00000489272 HOXA2O43364 376 aa9.58□□□□□ -0.88
CBWD1-216ENST00000489272 MS4A1P11836 297 aa9.58□□□□□ -0.88
CBWD1-216ENST00000489272 HAP1P54257 671 aaPredicted RBP9.58□□□□□ -0.88
CBWD1-216ENST00000489272 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
CBWD1-216ENST00000489272 ITGB7P26010 798 aa9.57□□□□□ -0.88
CBWD1-216ENST00000489272 FIGNL2A6NMB9 653 aa9.56□□□□□ -0.88
CBWD1-216ENST00000489272 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
CBWD1-216ENST00000489272 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
CBWD1-216ENST00000489272 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
CBWD1-216ENST00000489272 PTPRNQ16849 979 aa9.55□□□□□ -0.88
CBWD1-216ENST00000489272 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
CBWD1-216ENST00000489272 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
CBWD1-216ENST00000489272 KRTAP4-7Q9BYR0 210 aa9.53□□□□□ -0.88
CBWD1-216ENST00000489272 SEMA3EO15041 775 aa9.52□□□□□ -0.89
CBWD1-216ENST00000489272 GRM5P41594 1212 aa9.52□□□□□ -0.89
CBWD1-216ENST00000489272 GAS6Q14393 721 aa9.51□□□□□ -0.89
CBWD1-216ENST00000489272 NEDD1Q8NHV4 660 aa9.51□□□□□ -0.89
CBWD1-216ENST00000489272 BCRP11274 1271 aa9.47□□□□□ -0.89
CBWD1-216ENST00000489272 ZMYM1Q5SVZ6 1142 aa9.46□□□□□ -0.9
CBWD1-216ENST00000489272 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.9
CBWD1-216ENST00000489272 GOLGA2P5Q9HBQ8 144 aa9.46□□□□□ -0.9
CBWD1-216ENST00000489272 GPR37O15354 613 aa9.45□□□□□ -0.9
CBWD1-216ENST00000489272 TESPA1A2RU30 521 aaPredicted RBP9.44□□□□□ -0.9
CBWD1-216ENST00000489272 SPINT1O43278 529 aa9.44□□□□□ -0.9
CBWD1-216ENST00000489272 SMYD5Q6GMV2 418 aa9.44□□□□□ -0.9
CBWD1-216ENST00000489272 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
CBWD1-216ENST00000489272 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
CBWD1-216ENST00000489272 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
CBWD1-216ENST00000489272 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
CBWD1-216ENST00000489272 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
CBWD1-216ENST00000489272 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
CBWD1-216ENST00000489272 SENP3-EIF4A1A0A087X0R7 540 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms