RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 PRKRIP1Q9H875 184 aaPredicted RBP24.8■■□□□ 1.56
C9orf16-203ENST00000489240 TTC21BQ7Z4L5 1316 aa24.8■■□□□ 1.56
C9orf16-203ENST00000489240 NHSL1Q5SYE7 1610 aa24.79■■□□□ 1.56
C9orf16-203ENST00000489240 ROBO1Q9Y6N7 1651 aa24.79■■□□□ 1.56
C9orf16-203ENST00000489240 CNGB1Q14028 1251 aaPredicted RBP24.79■■□□□ 1.56
C9orf16-203ENST00000489240 RALBP1Q15311 655 aa24.79■■□□□ 1.56
C9orf16-203ENST00000489240 CERKQ8TCT0 537 aa24.79■■□□□ 1.56
C9orf16-203ENST00000489240 NPHP3Q7Z494 1330 aa24.79■■□□□ 1.56
C9orf16-203ENST00000489240 TOM1O60784 492 aa24.78■■□□□ 1.56
C9orf16-203ENST00000489240 FYB1O15117 783 aa24.77■■□□□ 1.56
C9orf16-203ENST00000489240 PARD3Q8TEW0 1356 aa24.77■■□□□ 1.56
C9orf16-203ENST00000489240 PIK3C2AO00443 1686 aa24.76■■□□□ 1.55
C9orf16-203ENST00000489240 USP54Q70EL1 1684 aa24.76■■□□□ 1.55
C9orf16-203ENST00000489240 KRT28Q7Z3Y7 464 aa24.76■■□□□ 1.55
C9orf16-203ENST00000489240 MIER1Q8N108 512 aa24.76■■□□□ 1.55
C9orf16-203ENST00000489240 ALS2Q96Q42 1657 aa24.73■■□□□ 1.55
C9orf16-203ENST00000489240 PAK3O75914 559 aaPredicted RBP24.73■■□□□ 1.55
C9orf16-203ENST00000489240 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
C9orf16-203ENST00000489240 GGNBP2Q9H3C7 697 aa24.73■■□□□ 1.55
C9orf16-203ENST00000489240 PXDNQ92626 1479 aa24.72■■□□□ 1.55
C9orf16-203ENST00000489240 NME9Q86XW9 330 aa24.72■■□□□ 1.55
C9orf16-203ENST00000489240 SBNO1A3KN83 1393 aa24.7■■□□□ 1.55
C9orf16-203ENST00000489240 MARF1Q9Y4F3 1742 aaKnown RBP24.7■■□□□ 1.54
C9orf16-203ENST00000489240 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.54
C9orf16-203ENST00000489240 XPCQ01831 940 aaPredicted RBP24.7■■□□□ 1.54
C9orf16-203ENST00000489240 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
C9orf16-203ENST00000489240 MYBBP1AQ9BQG0 1328 aaKnown RBP24.69■■□□□ 1.54
C9orf16-203ENST00000489240 COG3Q96JB2 828 aa24.69■■□□□ 1.54
C9orf16-203ENST00000489240 USP31Q70CQ4 1352 aa24.68■■□□□ 1.54
C9orf16-203ENST00000489240 ABTB2Q8N961 1025 aa24.68■■□□□ 1.54
C9orf16-203ENST00000489240 DDX17Q92841 729 aaKnown RBP24.68■■□□□ 1.54
C9orf16-203ENST00000489240 OVOS2A0A0J9YW53 1432 aa24.68■■□□□ 1.54
C9orf16-203ENST00000489240 OVOS2Q6IE36 1432 aa24.68■■□□□ 1.54
C9orf16-203ENST00000489240 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
C9orf16-203ENST00000489240 SOS2Q07890 1332 aaPredicted RBP24.66■■□□□ 1.54
C9orf16-203ENST00000489240 PHLPP1O60346 1717 aa24.66■■□□□ 1.54
C9orf16-203ENST00000489240 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
C9orf16-203ENST00000489240 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
C9orf16-203ENST00000489240 TNS3Q68CZ2 1445 aa24.65■■□□□ 1.54
C9orf16-203ENST00000489240 ZRANB1Q9UGI0 708 aa24.65■■□□□ 1.54
C9orf16-203ENST00000489240 NLRP6P59044 892 aa24.64■■□□□ 1.54
C9orf16-203ENST00000489240 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
C9orf16-203ENST00000489240 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
C9orf16-203ENST00000489240 PPP2R1AP30153 589 aa24.62■■□□□ 1.53
C9orf16-203ENST00000489240 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
C9orf16-203ENST00000489240 LMOD2Q6P5Q4 547 aa24.61■■□□□ 1.53
C9orf16-203ENST00000489240 ARHGEF10O15013 1369 aa24.61■■□□□ 1.53
C9orf16-203ENST00000489240 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
C9orf16-203ENST00000489240 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
C9orf16-203ENST00000489240 CRYBG1Q9Y4K1 1723 aa24.58■■□□□ 1.53
C9orf16-203ENST00000489240 AATKQ6ZMQ8 1374 aa24.58■■□□□ 1.53
C9orf16-203ENST00000489240 MED1Q15648 1581 aaPredicted RBP24.58■■□□□ 1.52
C9orf16-203ENST00000489240 PHRF1Q9P1Y6 1649 aaKnown RBP24.57■■□□□ 1.52
C9orf16-203ENST00000489240 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
C9orf16-203ENST00000489240 SLIT3O75094 1523 aa24.56■■□□□ 1.52
C9orf16-203ENST00000489240 LTN1O94822 1766 aa24.56■■□□□ 1.52
C9orf16-203ENST00000489240 LRRC59Q96AG4 307 aaKnown RBP24.55■■□□□ 1.52
C9orf16-203ENST00000489240 KCNH5Q8NCM2 988 aa24.54■■□□□ 1.52
C9orf16-203ENST00000489240 USP19O94966 1318 aa24.54■■□□□ 1.52
C9orf16-203ENST00000489240 ABCA3Q99758 1704 aa24.53■■□□□ 1.52
C9orf16-203ENST00000489240 MRS2Q9HD23 443 aa24.53■■□□□ 1.52
C9orf16-203ENST00000489240 NFAT5O94916 1531 aa24.51■■□□□ 1.51
C9orf16-203ENST00000489240 COL22A1Q8NFW1 1626 aaPredicted RBP24.51■■□□□ 1.51
C9orf16-203ENST00000489240 MTHFSP49914 203 aa24.51■■□□□ 1.51
C9orf16-203ENST00000489240 SMG6Q86US8 1419 aaKnown RBP24.51■■□□□ 1.51
C9orf16-203ENST00000489240 CFAP53Q96M91 514 aa24.5■■□□□ 1.51
C9orf16-203ENST00000489240 POLKQ9UBT6 870 aa24.5■■□□□ 1.51
C9orf16-203ENST00000489240 SOX12O15370 315 aa24.48■■□□□ 1.51
C9orf16-203ENST00000489240 GCP02774 474 aa24.48■■□□□ 1.51
C9orf16-203ENST00000489240 CCDC184Q52MB2 194 aa24.48■■□□□ 1.51
C9orf16-203ENST00000489240 CDK12Q9NYV4 1490 aaPredicted RBP24.47■■□□□ 1.51
C9orf16-203ENST00000489240 FBLN1P23142 703 aa24.47■■□□□ 1.51
C9orf16-203ENST00000489240 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
C9orf16-203ENST00000489240 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
C9orf16-203ENST00000489240 RRS1Q15050 365 aaKnown RBP24.46■■□□□ 1.51
C9orf16-203ENST00000489240 KIF24Q5T7B8 1368 aa24.45■■□□□ 1.5
C9orf16-203ENST00000489240 PLEKHG5O94827 1062 aa24.45■■□□□ 1.5
C9orf16-203ENST00000489240 EMILIN1Q9Y6C2 1016 aa24.45■■□□□ 1.5
C9orf16-203ENST00000489240 PPM1GO15355 546 aaPredicted RBP24.44■■□□□ 1.5
C9orf16-203ENST00000489240 INSRP06213 1382 aa24.43■■□□□ 1.5
C9orf16-203ENST00000489240 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
C9orf16-203ENST00000489240 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
C9orf16-203ENST00000489240 CABLES1Q8TDN4 633 aa24.42■■□□□ 1.5
C9orf16-203ENST00000489240 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
C9orf16-203ENST00000489240 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
C9orf16-203ENST00000489240 AMPHP49418 695 aa24.41■■□□□ 1.5
C9orf16-203ENST00000489240 HAP1P54257 671 aaPredicted RBP24.41■■□□□ 1.5
C9orf16-203ENST00000489240 FLT4P35916 1363 aa24.41■■□□□ 1.5
C9orf16-203ENST00000489240 RGPD5Q99666 1765 aa24.39■■□□□ 1.5
C9orf16-203ENST00000489240 ARHGEF25Q86VW2 580 aa24.39■■□□□ 1.49
C9orf16-203ENST00000489240 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
C9orf16-203ENST00000489240 ABCC6O95255 1503 aa24.39■■□□□ 1.49
C9orf16-203ENST00000489240 COL18A1P39060 1754 aa24.37■■□□□ 1.49
C9orf16-203ENST00000489240 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
C9orf16-203ENST00000489240 CPDO75976 1380 aa24.37■■□□□ 1.49
C9orf16-203ENST00000489240 DIAPH1O60610 1272 aaKnown RBP24.36■■□□□ 1.49
C9orf16-203ENST00000489240 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
C9orf16-203ENST00000489240 NUDCQ9Y266 331 aa24.36■■□□□ 1.49
C9orf16-203ENST00000489240 JCADQ9P266 1359 aa24.36■■□□□ 1.49
C9orf16-203ENST00000489240 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms