RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 FAM98CQ17RN3 349 aaKnown RBP23.15■■□□□ 1.3
ERGIC3-217ENST00000488935 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
ERGIC3-217ENST00000488935 ZRANB1Q9UGI0 708 aa23.14■■□□□ 1.29
ERGIC3-217ENST00000488935 NRAPQ86VF7 1730 aa23.13■■□□□ 1.29
ERGIC3-217ENST00000488935 ATP7BP35670 1465 aa23.12■■□□□ 1.29
ERGIC3-217ENST00000488935 CHRNA2Q15822 529 aa23.12■■□□□ 1.29
ERGIC3-217ENST00000488935 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
ERGIC3-217ENST00000488935 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
ERGIC3-217ENST00000488935 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
ERGIC3-217ENST00000488935 STAC3Q96MF2 364 aa23.11■■□□□ 1.29
ERGIC3-217ENST00000488935 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
ERGIC3-217ENST00000488935 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
ERGIC3-217ENST00000488935 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
ERGIC3-217ENST00000488935 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
ERGIC3-217ENST00000488935 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
ERGIC3-217ENST00000488935 ACEP12821 1306 aa23.08■■□□□ 1.29
ERGIC3-217ENST00000488935 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
ERGIC3-217ENST00000488935 ITSN1Q15811 1721 aa23.08■■□□□ 1.28
ERGIC3-217ENST00000488935 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
ERGIC3-217ENST00000488935 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
ERGIC3-217ENST00000488935 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
ERGIC3-217ENST00000488935 SF3B2Q13435 895 aaKnown RBP23.05■■□□□ 1.28
ERGIC3-217ENST00000488935 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
ERGIC3-217ENST00000488935 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
ERGIC3-217ENST00000488935 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
ERGIC3-217ENST00000488935 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
ERGIC3-217ENST00000488935 KIAA1210Q9ULL0 1709 aa23.02■■□□□ 1.28
ERGIC3-217ENST00000488935 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
ERGIC3-217ENST00000488935 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
ERGIC3-217ENST00000488935 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
ERGIC3-217ENST00000488935 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.28
ERGIC3-217ENST00000488935 L3MBTL2Q969R5 705 aa23.01■■□□□ 1.27
ERGIC3-217ENST00000488935 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
ERGIC3-217ENST00000488935 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
ERGIC3-217ENST00000488935 ABTB2Q8N961 1025 aa22.99■■□□□ 1.27
ERGIC3-217ENST00000488935 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
ERGIC3-217ENST00000488935 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
ERGIC3-217ENST00000488935 PSDA5PKW4 1024 aaPredicted RBP22.98■■□□□ 1.27
ERGIC3-217ENST00000488935 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
ERGIC3-217ENST00000488935 EN1Q05925 392 aaPredicted RBP22.97■■□□□ 1.27
ERGIC3-217ENST00000488935 ZBTB7CA1YPR0 619 aa22.96■■□□□ 1.27
ERGIC3-217ENST00000488935 SPATA31A1Q5TZJ5 1347 aa22.96■■□□□ 1.27
ERGIC3-217ENST00000488935 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
ERGIC3-217ENST00000488935 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
ERGIC3-217ENST00000488935 EVA1CP58658 441 aa22.94■■□□□ 1.26
ERGIC3-217ENST00000488935 CABP1Q9NZU7 370 aa22.94■■□□□ 1.26
ERGIC3-217ENST00000488935 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
ERGIC3-217ENST00000488935 BAG6P46379 1132 aa22.93■■□□□ 1.26
ERGIC3-217ENST00000488935 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
ERGIC3-217ENST00000488935 CAMTA1Q9Y6Y1 1673 aa22.92■■□□□ 1.26
ERGIC3-217ENST00000488935 NRKQ7Z2Y5 1582 aa22.92■■□□□ 1.26
ERGIC3-217ENST00000488935 TRIM37O94972 964 aa22.89■■□□□ 1.25
ERGIC3-217ENST00000488935 GCP02774 474 aa22.89■■□□□ 1.25
ERGIC3-217ENST00000488935 EZH2Q15910 746 aaKnown RBP22.88■■□□□ 1.25
ERGIC3-217ENST00000488935 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
ERGIC3-217ENST00000488935 USP19O94966 1318 aa22.87■■□□□ 1.25
ERGIC3-217ENST00000488935 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
ERGIC3-217ENST00000488935 RGPD1P0DJD0 1748 aa22.87■■□□□ 1.25
ERGIC3-217ENST00000488935 NLRP6P59044 892 aa22.86■■□□□ 1.25
ERGIC3-217ENST00000488935 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
ERGIC3-217ENST00000488935 TNS1Q9HBL0 1735 aaKnown RBP22.85■■□□□ 1.25
ERGIC3-217ENST00000488935 SOX12O15370 315 aa22.84■■□□□ 1.25
ERGIC3-217ENST00000488935 R3HDM1Q15032 1099 aaKnown RBP22.84■■□□□ 1.25
ERGIC3-217ENST00000488935 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
ERGIC3-217ENST00000488935 USP6P35125 1406 aa22.82■■□□□ 1.24
ERGIC3-217ENST00000488935 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
ERGIC3-217ENST00000488935 CPDO75976 1380 aa22.82■■□□□ 1.24
ERGIC3-217ENST00000488935 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
ERGIC3-217ENST00000488935 APBA3O96018 575 aa22.81■■□□□ 1.24
ERGIC3-217ENST00000488935 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
ERGIC3-217ENST00000488935 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
ERGIC3-217ENST00000488935 EVC2Q86UK5 1308 aa22.81■■□□□ 1.24
ERGIC3-217ENST00000488935 BARGINQ6ZT62 677 aa22.8■■□□□ 1.24
ERGIC3-217ENST00000488935 CAMKK2Q96RR4 588 aa22.79■■□□□ 1.24
ERGIC3-217ENST00000488935 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
ERGIC3-217ENST00000488935 COL5A2P05997 1499 aaPredicted RBP22.78■■□□□ 1.24
ERGIC3-217ENST00000488935 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
ERGIC3-217ENST00000488935 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
ERGIC3-217ENST00000488935 TTC21BQ7Z4L5 1316 aa22.75■■□□□ 1.23
ERGIC3-217ENST00000488935 SLIT3O75094 1523 aa22.73■■□□□ 1.23
ERGIC3-217ENST00000488935 TOM1L2Q6ZVM7 507 aa22.73■■□□□ 1.23
ERGIC3-217ENST00000488935 COL18A1P39060 1754 aa22.73■■□□□ 1.23
ERGIC3-217ENST00000488935 DISP2A7MBM2 1401 aa22.73■■□□□ 1.23
ERGIC3-217ENST00000488935 AKAP12Q02952 1782 aa22.72■■□□□ 1.23
ERGIC3-217ENST00000488935 CRB1P82279 1406 aa22.72■■□□□ 1.23
ERGIC3-217ENST00000488935 PTF1AQ7RTS3 328 aa22.71■■□□□ 1.23
ERGIC3-217ENST00000488935 AATKQ6ZMQ8 1374 aa22.71■■□□□ 1.23
ERGIC3-217ENST00000488935 LRP5O75197 1615 aa22.71■■□□□ 1.23
ERGIC3-217ENST00000488935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.7■■□□□ 1.22
ERGIC3-217ENST00000488935 THRAP3Q9Y2W1 955 aaKnown RBP22.7■■□□□ 1.22
ERGIC3-217ENST00000488935 BRD4O60885 1362 aaPredicted RBP22.7■■□□□ 1.22
ERGIC3-217ENST00000488935 PARP4Q9UKK3 1724 aaKnown RBP22.69■■□□□ 1.22
ERGIC3-217ENST00000488935 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
ERGIC3-217ENST00000488935 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
ERGIC3-217ENST00000488935 ARHGEF25Q86VW2 580 aa22.67■■□□□ 1.22
ERGIC3-217ENST00000488935 ZNF692Q9BU19 519 aaPredicted RBP22.67■■□□□ 1.22
ERGIC3-217ENST00000488935 CSB-PGBD3P0DP91 1061 aa22.66■■□□□ 1.22
ERGIC3-217ENST00000488935 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
ERGIC3-217ENST00000488935 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
ERGIC3-217ENST00000488935 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms