RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 CLIP1P30622 1438 aa8.2□□□□□ -1.1
SF3A3-207ENST00000488934 CD109Q6YHK3 1445 aa8.2□□□□□ -1.1
SF3A3-207ENST00000488934 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
SF3A3-207ENST00000488934 CFAP74Q9C0B2 1584 aa8.19□□□□□ -1.1
SF3A3-207ENST00000488934 KDM4AO75164 1064 aa8.19□□□□□ -1.1
SF3A3-207ENST00000488934 ADH1BP00325 375 aa8.19□□□□□ -1.1
SF3A3-207ENST00000488934 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
SF3A3-207ENST00000488934 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
SF3A3-207ENST00000488934 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
SF3A3-207ENST00000488934 ARID3CA6NKF2 412 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 Q3C1V9 767 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 PUS10Q3MIT2 529 aaKnown RBP8.18□□□□□ -1.1
SF3A3-207ENST00000488934 MORN1Q5T089 497 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 PPP1R18Q6NYC8 613 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 PHLDB1Q86UU1 1377 aa8.18□□□□□ -1.1
SF3A3-207ENST00000488934 CDK13Q14004 1512 aaKnown RBP8.18□□□□□ -1.1
SF3A3-207ENST00000488934 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-207ENST00000488934 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
SF3A3-207ENST00000488934 CASKIN1Q8WXD9 1431 aa8.17□□□□□ -1.1
SF3A3-207ENST00000488934 KIF14Q15058 1648 aa8.17□□□□□ -1.1
SF3A3-207ENST00000488934 TRIM66O15016 1216 aa8.16□□□□□ -1.1
SF3A3-207ENST00000488934 NEO1Q92859 1461 aa8.16□□□□□ -1.1
SF3A3-207ENST00000488934 LRRIQ1Q96JM4 1722 aa8.16□□□□□ -1.1
SF3A3-207ENST00000488934 SPSB2Q99619 263 aa8.16□□□□□ -1.1
SF3A3-207ENST00000488934 MYO5CQ9NQX4 1742 aa8.16□□□□□ -1.1
SF3A3-207ENST00000488934 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-207ENST00000488934 SALL2Q9Y467 1007 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-207ENST00000488934 CEP162Q5TB80 1403 aa8.15□□□□□ -1.1
SF3A3-207ENST00000488934 TLL1O43897 1013 aa8.15□□□□□ -1.1
SF3A3-207ENST00000488934 SSTR3P32745 418 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-207ENST00000488934 GIGYF2Q6Y7W6 1299 aaKnown RBP8.15□□□□□ -1.1
SF3A3-207ENST00000488934 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
SF3A3-207ENST00000488934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
SF3A3-207ENST00000488934 DIXDC1Q155Q3 683 aa8.14□□□□□ -1.11
SF3A3-207ENST00000488934 TTC37Q6PGP7 1564 aa8.14□□□□□ -1.11
SF3A3-207ENST00000488934 ARAP3Q8WWN8 1544 aa8.13□□□□□ -1.11
SF3A3-207ENST00000488934 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-207ENST00000488934 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
SF3A3-207ENST00000488934 SLC27A5Q9Y2P5 690 aa8.13□□□□□ -1.11
SF3A3-207ENST00000488934 FANCAO15360 1455 aa8.13□□□□□ -1.11
SF3A3-207ENST00000488934 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
SF3A3-207ENST00000488934 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
SF3A3-207ENST00000488934 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-207ENST00000488934 HOXA2O43364 376 aa8.11□□□□□ -1.11
SF3A3-207ENST00000488934 S1PR4O95977 384 aa8.11□□□□□ -1.11
SF3A3-207ENST00000488934 PDE4DQ08499 809 aa8.11□□□□□ -1.11
SF3A3-207ENST00000488934 REPIN1Q9BWE0 567 aaKnown RBP8.11□□□□□ -1.11
SF3A3-207ENST00000488934 PRKD2Q9BZL6 878 aa8.11□□□□□ -1.11
SF3A3-207ENST00000488934 PLCH2O75038 1416 aa8.1□□□□□ -1.11
SF3A3-207ENST00000488934 PREX2Q70Z35 1606 aa8.1□□□□□ -1.11
SF3A3-207ENST00000488934 COL17A1Q9UMD9 1497 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-207ENST00000488934 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 BEGAINQ9BUH8 593 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 RICTORQ6R327 1708 aa8.09□□□□□ -1.11
SF3A3-207ENST00000488934 ARHGAP5Q13017 1502 aa8.08□□□□□ -1.12
SF3A3-207ENST00000488934 EHBP1L1Q8N3D4 1523 aa8.08□□□□□ -1.12
SF3A3-207ENST00000488934 DENND4BO75064 1496 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-207ENST00000488934 IRX2Q9BZI1 471 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-207ENST00000488934 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
SF3A3-207ENST00000488934 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
SF3A3-207ENST00000488934 ITSN2Q9NZM3 1697 aa8.08□□□□□ -1.12
SF3A3-207ENST00000488934 ADGRL1O94910 1474 aa8.07□□□□□ -1.12
SF3A3-207ENST00000488934 CDC42BPBQ9Y5S2 1711 aa8.07□□□□□ -1.12
SF3A3-207ENST00000488934 USB1Q9BQ65 265 aaKnown RBP8.07□□□□□ -1.12
SF3A3-207ENST00000488934 ZMYM4Q5VZL5 1548 aa8.07□□□□□ -1.12
SF3A3-207ENST00000488934 MTUS2Q5JR59 1369 aa8.07□□□□□ -1.12
SF3A3-207ENST00000488934 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 FRMPD1Q5SYB0 1578 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 FDX1P10109 184 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 EFCAB2Q5VUJ9 269 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 SPIRE2Q8WWL2 714 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
SF3A3-207ENST00000488934 ZNF518AQ6AHZ1 1483 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
SF3A3-207ENST00000488934 ARHGEF40Q8TER5 1519 aa8.05□□□□□ -1.12
SF3A3-207ENST00000488934 SLC19A1P41440 591 aa8.05□□□□□ -1.12
SF3A3-207ENST00000488934 LAPTM4AQ15012 233 aa8.05□□□□□ -1.12
SF3A3-207ENST00000488934 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
SF3A3-207ENST00000488934 TIAM1Q13009 1591 aa8.05□□□□□ -1.12
SF3A3-207ENST00000488934 POGZQ7Z3K3 1410 aa8.04□□□□□ -1.12
SF3A3-207ENST00000488934 MAP3K1Q13233 1512 aa8.04□□□□□ -1.12
SF3A3-207ENST00000488934 LOC105371045A0A1W2PR82 267 aa8.04□□□□□ -1.12
SF3A3-207ENST00000488934 GJA5P36382 358 aa8.04□□□□□ -1.12
SF3A3-207ENST00000488934 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 PLEKHH2Q8IVE3 1493 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 CCNB3Q8WWL7 1395 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-207ENST00000488934 MS4A1P11836 297 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-207ENST00000488934 TBC1D2Q9BYX2 928 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 ABCC1P33527 1531 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 ZFYVE16Q7Z3T8 1539 aa8.03□□□□□ -1.12
SF3A3-207ENST00000488934 KDM5CP41229 1560 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms