RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
ARHGEF39-204ENST00000488918 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
ARHGEF39-204ENST00000488918 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF39-204ENST00000488918 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF39-204ENST00000488918 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF39-204ENST00000488918 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
ARHGEF39-204ENST00000488918 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
ARHGEF39-204ENST00000488918 POLR3AO14802 1390 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF39-204ENST00000488918 HDGFL2Q7Z4V5 671 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF39-204ENST00000488918 UNC5CLQ8IV45 518 aa15.71■□□□□ 0.11
ARHGEF39-204ENST00000488918 PRDM11Q9NQV5 511 aa15.71■□□□□ 0.11
ARHGEF39-204ENST00000488918 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF39-204ENST00000488918 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
ARHGEF39-204ENST00000488918 A0A0G2JS52 829 aa15.69■□□□□ 0.1
ARHGEF39-204ENST00000488918 MYT1Q01538 1121 aa15.69■□□□□ 0.1
ARHGEF39-204ENST00000488918 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 NLRP6P59044 892 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 TMF1P82094 1093 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
ARHGEF39-204ENST00000488918 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
ARHGEF39-204ENST00000488918 EVA1CP58658 441 aa15.66■□□□□ 0.1
ARHGEF39-204ENST00000488918 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
ARHGEF39-204ENST00000488918 GJD4Q96KN9 370 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF39-204ENST00000488918 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
ARHGEF39-204ENST00000488918 USP47Q96K76 1375 aa15.65■□□□□ 0.1
ARHGEF39-204ENST00000488918 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
ARHGEF39-204ENST00000488918 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
ARHGEF39-204ENST00000488918 USP6P35125 1406 aa15.64■□□□□ 0.09
ARHGEF39-204ENST00000488918 PUS7Q96PZ0 661 aaKnown RBP15.64■□□□□ 0.09
ARHGEF39-204ENST00000488918 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
ARHGEF39-204ENST00000488918 VPS72Q15906 364 aa15.63■□□□□ 0.09
ARHGEF39-204ENST00000488918 BCL9LQ86UU0 1499 aa15.63■□□□□ 0.09
ARHGEF39-204ENST00000488918 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
ARHGEF39-204ENST00000488918 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
ARHGEF39-204ENST00000488918 ATRNO75882 1429 aa15.62■□□□□ 0.09
ARHGEF39-204ENST00000488918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
ARHGEF39-204ENST00000488918 STRN4Q9NRL3 753 aa15.62■□□□□ 0.09
ARHGEF39-204ENST00000488918 KIAA0232Q92628 1395 aa15.62■□□□□ 0.09
ARHGEF39-204ENST00000488918 MARF1Q9Y4F3 1742 aaKnown RBP15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 GCP02774 474 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 CHRNA2Q15822 529 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 KCNH5Q8NCM2 988 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 SLIT2O94813 1529 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 NINLQ9Y2I6 1382 aa15.61■□□□□ 0.09
ARHGEF39-204ENST00000488918 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
ARHGEF39-204ENST00000488918 SOX12O15370 315 aa15.6■□□□□ 0.09
ARHGEF39-204ENST00000488918 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
ARHGEF39-204ENST00000488918 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
ARHGEF39-204ENST00000488918 EIF4G2P78344 907 aaKnown RBP eCLIP15.59■□□□□ 0.09
ARHGEF39-204ENST00000488918 RGS12O14924 1447 aa15.59■□□□□ 0.09
ARHGEF39-204ENST00000488918 TESK2Q96S53 571 aa15.58■□□□□ 0.08
ARHGEF39-204ENST00000488918 USP19O94966 1318 aa15.57■□□□□ 0.08
ARHGEF39-204ENST00000488918 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
ARHGEF39-204ENST00000488918 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
ARHGEF39-204ENST00000488918 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
ARHGEF39-204ENST00000488918 USP35Q9P2H5 1018 aa15.56■□□□□ 0.08
ARHGEF39-204ENST00000488918 CPSF1Q10570 1443 aaKnown RBP15.55■□□□□ 0.08
ARHGEF39-204ENST00000488918 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
ARHGEF39-204ENST00000488918 SF3B2Q13435 895 aaKnown RBP15.55■□□□□ 0.08
ARHGEF39-204ENST00000488918 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
ARHGEF39-204ENST00000488918 NWD2Q9ULI1 1742 aa15.54■□□□□ 0.08
ARHGEF39-204ENST00000488918 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
ARHGEF39-204ENST00000488918 EDC4Q6P2E9 1401 aaKnown RBP15.53■□□□□ 0.08
ARHGEF39-204ENST00000488918 CPDO75976 1380 aa15.53■□□□□ 0.08
ARHGEF39-204ENST00000488918 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
ARHGEF39-204ENST00000488918 COG3Q96JB2 828 aa15.53■□□□□ 0.08
ARHGEF39-204ENST00000488918 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.53■□□□□ 0.08
ARHGEF39-204ENST00000488918 SPATA31A5Q5VU36 1347 aa15.52■□□□□ 0.08
ARHGEF39-204ENST00000488918 SPATA31A7Q8IWB4 1347 aa15.52■□□□□ 0.08
ARHGEF39-204ENST00000488918 KRT27Q7Z3Y8 459 aa15.52■□□□□ 0.08
ARHGEF39-204ENST00000488918 NME9Q86XW9 330 aa15.52■□□□□ 0.08
ARHGEF39-204ENST00000488918 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
ARHGEF39-204ENST00000488918 TOM1L2Q6ZVM7 507 aa15.51■□□□□ 0.07
ARHGEF39-204ENST00000488918 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-204ENST00000488918 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
ARHGEF39-204ENST00000488918 SSH2Q76I76 1423 aa15.5■□□□□ 0.07
ARHGEF39-204ENST00000488918 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 HSPA5P11021 654 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 TCP11L2Q8N4U5 519 aa15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 AATKQ6ZMQ8 1374 aa15.49■□□□□ 0.07
ARHGEF39-204ENST00000488918 SPATA31A1Q5TZJ5 1347 aa15.48■□□□□ 0.07
ARHGEF39-204ENST00000488918 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
ARHGEF39-204ENST00000488918 THRAP3Q9Y2W1 955 aaKnown RBP15.48■□□□□ 0.07
ARHGEF39-204ENST00000488918 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
ARHGEF39-204ENST00000488918 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF39-204ENST00000488918 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
ARHGEF39-204ENST00000488918 GLI3P10071 1580 aa15.46■□□□□ 0.07
ARHGEF39-204ENST00000488918 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
ARHGEF39-204ENST00000488918 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
ARHGEF39-204ENST00000488918 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
ARHGEF39-204ENST00000488918 PIK3C2AO00443 1686 aa15.45■□□□□ 0.06
ARHGEF39-204ENST00000488918 SLIT3O75094 1523 aa15.45■□□□□ 0.06
ARHGEF39-204ENST00000488918 AMPHP49418 695 aa15.45■□□□□ 0.06
ARHGEF39-204ENST00000488918 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
ARHGEF39-204ENST00000488918 CRB1P82279 1406 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms