RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	KDM4C	Q9H3R0	1056 aa		10.87	□□□□□ -0.67
CTNNB1-215	ENST00000488914	CTH	P32929	405 aa		10.86	□□□□□ -0.67
CTNNB1-215	ENST00000488914	CLK2	P49760	499 aa	Known RBP	10.86	□□□□□ -0.67
CTNNB1-215	ENST00000488914	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNNB1-215	ENST00000488914	TSC1	Q92574	1164 aa		10.86	□□□□□ -0.67
CTNNB1-215	ENST00000488914	FAM117A	Q9C073	453 aa		10.86	□□□□□ -0.67
CTNNB1-215	ENST00000488914	AXIN1	O15169	862 aa		10.85	□□□□□ -0.67
CTNNB1-215	ENST00000488914	ALDH1A1	P00352	501 aa		10.85	□□□□□ -0.67
CTNNB1-215	ENST00000488914	TUSC1	Q2TAM9	212 aa		10.85	□□□□□ -0.67
CTNNB1-215	ENST00000488914	EHBP1	Q8NDI1	1231 aa		10.85	□□□□□ -0.67
CTNNB1-215	ENST00000488914	F12	P00748	615 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNNB1-215	ENST00000488914	SMCP	P49901	116 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNNB1-215	ENST00000488914	ZNF511	Q8NB15	262 aa		10.84	□□□□□ -0.67
CTNNB1-215	ENST00000488914	ZNF775	Q96BV0	537 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNNB1-215	ENST00000488914	PLEKHG3	A1L390	1219 aa		10.82	□□□□□ -0.68
CTNNB1-215	ENST00000488914	CTC1	Q2NKJ3	1217 aa		10.82	□□□□□ -0.68
CTNNB1-215	ENST00000488914	RSPH6A	Q9H0K4	717 aa		10.82	□□□□□ -0.68
CTNNB1-215	ENST00000488914	GMPR2	Q9P2T1	348 aa	Known RBP	10.82	□□□□□ -0.68
CTNNB1-215	ENST00000488914	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNNB1-215	ENST00000488914	FOXJ1	Q92949	421 aa		10.8	□□□□□ -0.68
CTNNB1-215	ENST00000488914	TLL2	Q9Y6L7	1015 aa		10.8	□□□□□ -0.68
CTNNB1-215	ENST00000488914	CTDSPL2	Q05D32	466 aa		10.77	□□□□□ -0.69
CTNNB1-215	ENST00000488914	SKIV2L	Q15477	1246 aa	Known RBP	10.77	□□□□□ -0.69
CTNNB1-215	ENST00000488914	C4orf48	Q5BLP8	95 aa		10.76	□□□□□ -0.69
CTNNB1-215	ENST00000488914	SH3D19	Q5HYK7	790 aa		10.76	□□□□□ -0.69
CTNNB1-215	ENST00000488914	ATP13A2	Q9NQ11	1180 aa		10.76	□□□□□ -0.69
CTNNB1-215	ENST00000488914	VARS	P26640	1264 aa	Known RBP	10.75	□□□□□ -0.69
CTNNB1-215	ENST00000488914	HELB	Q8NG08	1087 aa	Predicted RBP	10.74	□□□□□ -0.69
CTNNB1-215	ENST00000488914	DDRGK1	Q96HY6	314 aa		10.74	□□□□□ -0.69
CTNNB1-215	ENST00000488914	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
CTNNB1-215	ENST00000488914	WASF2	Q9Y6W5	498 aa		10.74	□□□□□ -0.69
CTNNB1-215	ENST00000488914	C11orf95	C9JLR9	678 aa	Predicted RBP	10.73	□□□□□ -0.69
CTNNB1-215	ENST00000488914	LRRN4	Q8WUT4	740 aa		10.72	□□□□□ -0.69
CTNNB1-215	ENST00000488914	SNRPB	P14678	240 aa	Known RBP	10.71	□□□□□ -0.69
CTNNB1-215	ENST00000488914	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.7	□□□□□ -0.7
CTNNB1-215	ENST00000488914	AGER	Q15109	404 aa		10.69	□□□□□ -0.7
CTNNB1-215	ENST00000488914	CAPN5	O15484	640 aa	Predicted RBP	10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	BMP1	P13497	986 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	NNT	Q13423	1086 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	ARID5B	Q14865	1188 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	PPP2R2D	Q66LE6	453 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	MPND	Q8N594	471 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	FAM174A	Q8TBP5	190 aa		10.68	□□□□□ -0.7
CTNNB1-215	ENST00000488914	NEUROD2	Q15784	382 aa		10.67	□□□□□ -0.7
CTNNB1-215	ENST00000488914	TRIM46	Q7Z4K8	759 aa		10.67	□□□□□ -0.7
CTNNB1-215	ENST00000488914	SH3RF1	Q7Z6J0	888 aa		10.66	□□□□□ -0.7
CTNNB1-215	ENST00000488914	CDK15	Q96Q40	435 aa		10.66	□□□□□ -0.7
CTNNB1-215	ENST00000488914	AP1G2	O75843	785 aa		10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	NR6A1	Q15406	480 aa		10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	SH3BP5L	Q7L8J4	393 aa		10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	BPHL	Q86WA6	291 aa	Predicted RBP	10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	IL27	Q8NEV9	243 aa		10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	TRIM47	Q96LD4	638 aa		10.65	□□□□□ -0.7
CTNNB1-215	ENST00000488914	ADH1C	P00326	375 aa		10.64	□□□□□ -0.71
CTNNB1-215	ENST00000488914	NR3C2	P08235	984 aa		10.64	□□□□□ -0.71
CTNNB1-215	ENST00000488914	GRM5	P41594	1212 aa		10.64	□□□□□ -0.71
CTNNB1-215	ENST00000488914	ARMC2	Q8NEN0	867 aa		10.64	□□□□□ -0.71
CTNNB1-215	ENST00000488914	KLF16	Q9BXK1	252 aa	Predicted RBP	10.64	□□□□□ -0.71
CTNNB1-215	ENST00000488914	MAGEB6P1	A0A0J9YX57	407 aa		10.63	□□□□□ -0.71
CTNNB1-215	ENST00000488914	EPS8L1	Q8TE68	723 aa		10.63	□□□□□ -0.71
CTNNB1-215	ENST00000488914	C1QTNF2	Q9BXJ5	285 aa		10.63	□□□□□ -0.71
CTNNB1-215	ENST00000488914	TIMP2	P16035	220 aa		10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	BRPF1	P55201	1214 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	TPRN	Q4KMQ1	711 aa		10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	LCE2A	Q5TA79	106 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	NBPF14	Q5TI25	921 aa		10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	CARD14	Q9BXL6	1004 aa		10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	HMX1	Q9NP08	348 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNNB1-215	ENST00000488914	WDR4	P57081	412 aa	Known RBP	10.61	□□□□□ -0.71
CTNNB1-215	ENST00000488914	SENP2	Q9HC62	589 aa		10.61	□□□□□ -0.71
CTNNB1-215	ENST00000488914	RFC5	P40937	340 aa		10.6	□□□□□ -0.71
CTNNB1-215	ENST00000488914	TREML4	Q6UXN2	200 aa		10.6	□□□□□ -0.71
CTNNB1-215	ENST00000488914	ZFAND3	Q9H8U3	227 aa		10.6	□□□□□ -0.71
CTNNB1-215	ENST00000488914	FKBPL	Q9UIM3	349 aa		10.59	□□□□□ -0.71
CTNNB1-215	ENST00000488914	USP17L8	P0C7I0	530 aa		10.58	□□□□□ -0.72
CTNNB1-215	ENST00000488914	ITPKC	Q96DU7	683 aa		10.58	□□□□□ -0.72
CTNNB1-215	ENST00000488914	OCSTAMP	Q9BR26	566 aa		10.58	□□□□□ -0.72
CTNNB1-215	ENST00000488914	ERFE	Q4G0M1	354 aa		10.57	□□□□□ -0.72
CTNNB1-215	ENST00000488914	KIFC2	Q96AC6	838 aa		10.57	□□□□□ -0.72
CTNNB1-215	ENST00000488914	ZFP42	Q96MM3	310 aa		10.57	□□□□□ -0.72
CTNNB1-215	ENST00000488914	ZIC2	O95409	532 aa	Predicted RBP	10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	NFX1	Q12986	1120 aa	Known RBP	10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	NR5A1	Q13285	461 aa		10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	LCE2C	Q5TA81	110 aa		10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	VASH1	Q7L8A9	365 aa	Predicted RBP	10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	TRMT44	Q8IYL2	757 aa	Known RBP	10.56	□□□□□ -0.72
CTNNB1-215	ENST00000488914	FSHR	P23945	695 aa		10.55	□□□□□ -0.72
CTNNB1-215	ENST00000488914	PDXDC2P	Q6P474	469 aa		10.55	□□□□□ -0.72
CTNNB1-215	ENST00000488914	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.55	□□□□□ -0.72
CTNNB1-215	ENST00000488914	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.55	□□□□□ -0.72
CTNNB1-215	ENST00000488914	GOPC	Q9HD26	462 aa		10.55	□□□□□ -0.72
CTNNB1-215	ENST00000488914	MRPL14	Q6P1L8	145 aa	Known RBP	10.54	□□□□□ -0.72
CTNNB1-215	ENST00000488914	PURB	Q96QR8	312 aa	Known RBP	10.54	□□□□□ -0.72
CTNNB1-215	ENST00000488914	ARHGAP9	Q9BRR9	750 aa		10.54	□□□□□ -0.72
CTNNB1-215	ENST00000488914	WFS1	O76024	890 aa		10.53	□□□□□ -0.72
CTNNB1-215	ENST00000488914	MAP4K5	Q9Y4K4	846 aa		10.53	□□□□□ -0.72
CTNNB1-215	ENST00000488914	TRIM34	Q9BYJ4	488 aa		10.52	□□□□□ -0.73
CTNNB1-215	ENST00000488914	SOBP	A7XYQ1	873 aa		10.51	□□□□□ -0.73
CTNNB1-215	ENST00000488914	TERT	O14746	1132 aa	Known RBP	10.51	□□□□□ -0.73
CTNNB1-215	ENST00000488914	ZBTB33	Q86T24	672 aa		10.5	□□□□□ -0.73

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