RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 NRAPQ86VF7 1730 aa26.46■■□□□ 1.83
ATG9A-222ENST00000488833 EP400Q96L91 3159 aa26.46■■□□□ 1.83
ATG9A-222ENST00000488833 SEPT12Q8IYM1 358 aa26.42■■□□□ 1.82
ATG9A-222ENST00000488833 BTG4Q9NY30 223 aa26.41■■□□□ 1.82
ATG9A-222ENST00000488833 CENPJQ9HC77 1338 aaPredicted RBP26.4■■□□□ 1.82
ATG9A-222ENST00000488833 L3MBTL2Q969R5 705 aa26.4■■□□□ 1.82
ATG9A-222ENST00000488833 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
ATG9A-222ENST00000488833 QRICH2Q9H0J4 1663 aa26.4■■□□□ 1.82
ATG9A-222ENST00000488833 PHRF1Q9P1Y6 1649 aaKnown RBP26.39■■□□□ 1.82
ATG9A-222ENST00000488833 CCDC61Q9Y6R9 512 aa26.39■■□□□ 1.82
ATG9A-222ENST00000488833 ACEP12821 1306 aa26.39■■□□□ 1.81
ATG9A-222ENST00000488833 CCDC125Q86Z20 511 aa26.38■■□□□ 1.81
ATG9A-222ENST00000488833 PRDM11Q9NQV5 511 aa26.37■■□□□ 1.81
ATG9A-222ENST00000488833 A0A0G2JS52 829 aa26.36■■□□□ 1.81
ATG9A-222ENST00000488833 SRPK2P78362 688 aaKnown RBP26.36■■□□□ 1.81
ATG9A-222ENST00000488833 MYT1Q01538 1121 aa26.36■■□□□ 1.81
ATG9A-222ENST00000488833 SIN3AQ96ST3 1273 aa26.36■■□□□ 1.81
ATG9A-222ENST00000488833 PLEKHG3A1L390 1219 aa26.35■■□□□ 1.81
ATG9A-222ENST00000488833 BLMP54132 1417 aaPredicted RBP26.35■■□□□ 1.81
ATG9A-222ENST00000488833 NBPF8Q3BBV2 869 aa26.35■■□□□ 1.81
ATG9A-222ENST00000488833 TRPM1Q7Z4N2 1603 aa26.35■■□□□ 1.81
ATG9A-222ENST00000488833 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
ATG9A-222ENST00000488833 NUTM2GQ5VZR2 741 aa26.34■■□□□ 1.81
ATG9A-222ENST00000488833 PPIP5K1Q6PFW1 1433 aa26.33■■□□□ 1.81
ATG9A-222ENST00000488833 NEUROD1Q13562 356 aa26.33■■□□□ 1.81
ATG9A-222ENST00000488833 KIAA0232Q92628 1395 aa26.33■■□□□ 1.8
ATG9A-222ENST00000488833 FAM98CQ17RN3 349 aaKnown RBP26.32■■□□□ 1.8
ATG9A-222ENST00000488833 KRT27Q7Z3Y8 459 aa26.32■■□□□ 1.8
ATG9A-222ENST00000488833 CABP2Q9NPB3 220 aa26.31■■□□□ 1.8
ATG9A-222ENST00000488833 NRKQ7Z2Y5 1582 aa26.29■■□□□ 1.8
ATG9A-222ENST00000488833 CHRNA2Q15822 529 aa26.29■■□□□ 1.8
ATG9A-222ENST00000488833 SPATA31A5Q5VU36 1347 aa26.29■■□□□ 1.8
ATG9A-222ENST00000488833 SPATA31A7Q8IWB4 1347 aa26.29■■□□□ 1.8
ATG9A-222ENST00000488833 ZC3H6P61129 1189 aaKnown RBP26.28■■□□□ 1.8
ATG9A-222ENST00000488833 ABTB2Q8N961 1025 aa26.27■■□□□ 1.8
ATG9A-222ENST00000488833 ZRANB1Q9UGI0 708 aa26.27■■□□□ 1.8
ATG9A-222ENST00000488833 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
ATG9A-222ENST00000488833 SF3B2Q13435 895 aaKnown RBP26.26■■□□□ 1.79
ATG9A-222ENST00000488833 THSD7AQ9UPZ6 1657 aa26.25■■□□□ 1.79
ATG9A-222ENST00000488833 STRN4Q9NRL3 753 aa26.24■■□□□ 1.79
ATG9A-222ENST00000488833 USP19O94966 1318 aa26.23■■□□□ 1.79
ATG9A-222ENST00000488833 DEFB132Q7Z7B7 95 aa26.23■■□□□ 1.79
ATG9A-222ENST00000488833 EVC2Q86UK5 1308 aa26.22■■□□□ 1.79
ATG9A-222ENST00000488833 BRD4O60885 1362 aaPredicted RBP26.21■■□□□ 1.79
ATG9A-222ENST00000488833 CABP1Q9NZU7 370 aa26.21■■□□□ 1.79
ATG9A-222ENST00000488833 USP6P35125 1406 aa26.21■■□□□ 1.79
ATG9A-222ENST00000488833 SPATA31A1Q5TZJ5 1347 aa26.2■■□□□ 1.79
ATG9A-222ENST00000488833 NLRP13Q86W25 1043 aa26.2■■□□□ 1.78
ATG9A-222ENST00000488833 CPDO75976 1380 aa26.2■■□□□ 1.78
ATG9A-222ENST00000488833 LMO7Q8WWI1 1683 aa26.19■■□□□ 1.78
ATG9A-222ENST00000488833 SSH2Q76I76 1423 aa26.18■■□□□ 1.78
ATG9A-222ENST00000488833 CAMTA1Q9Y6Y1 1673 aa26.17■■□□□ 1.78
ATG9A-222ENST00000488833 EVA1CP58658 441 aa26.16■■□□□ 1.78
ATG9A-222ENST00000488833 RGPD1P0DJD0 1748 aa26.16■■□□□ 1.78
ATG9A-222ENST00000488833 GCP02774 474 aa26.15■■□□□ 1.78
ATG9A-222ENST00000488833 FAM182BQ5T319 152 aa26.15■■□□□ 1.78
ATG9A-222ENST00000488833 USP35Q9P2H5 1018 aa26.14■■□□□ 1.78
ATG9A-222ENST00000488833 PIK3C2AO00443 1686 aa26.13■■□□□ 1.77
ATG9A-222ENST00000488833 BAG6P46379 1132 aa26.13■■□□□ 1.77
ATG9A-222ENST00000488833 SLIT3O75094 1523 aa26.13■■□□□ 1.77
ATG9A-222ENST00000488833 NLRP6P59044 892 aa26.12■■□□□ 1.77
ATG9A-222ENST00000488833 SRCAPQ6ZRS2 3230 aa26.11■■□□□ 1.77
ATG9A-222ENST00000488833 AKAP12Q02952 1782 aa26.11■■□□□ 1.77
ATG9A-222ENST00000488833 ZBTB7CA1YPR0 619 aa26.11■■□□□ 1.77
ATG9A-222ENST00000488833 LARP1Q6PKG0 1096 aaKnown RBP26.11■■□□□ 1.77
ATG9A-222ENST00000488833 TONSLQ96HA7 1378 aa26.09■■□□□ 1.77
ATG9A-222ENST00000488833 TNS1Q9HBL0 1735 aaKnown RBP26.09■■□□□ 1.77
ATG9A-222ENST00000488833 COL5A2P05997 1499 aaPredicted RBP26.09■■□□□ 1.77
ATG9A-222ENST00000488833 BARGINQ6ZT62 677 aa26.07■■□□□ 1.76
ATG9A-222ENST00000488833 CARD11Q9BXL7 1154 aa26.07■■□□□ 1.76
ATG9A-222ENST00000488833 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
ATG9A-222ENST00000488833 SBNO2Q9Y2G9 1366 aa26.06■■□□□ 1.76
ATG9A-222ENST00000488833 ZNF692Q9BU19 519 aaPredicted RBP26.05■■□□□ 1.76
ATG9A-222ENST00000488833 TTC21BQ7Z4L5 1316 aa26.05■■□□□ 1.76
ATG9A-222ENST00000488833 AATKQ6ZMQ8 1374 aa26.04■■□□□ 1.76
ATG9A-222ENST00000488833 EN1Q05925 392 aaPredicted RBP26.03■■□□□ 1.76
ATG9A-222ENST00000488833 FAM196AQ6ZSG2 479 aa26.03■■□□□ 1.76
ATG9A-222ENST00000488833 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
ATG9A-222ENST00000488833 PDE3BQ13370 1112 aa26.02■■□□□ 1.76
ATG9A-222ENST00000488833 KTN1Q86UP2 1357 aaKnown RBP26.02■■□□□ 1.76
ATG9A-222ENST00000488833 CRB1P82279 1406 aa26.02■■□□□ 1.76
ATG9A-222ENST00000488833 CPSF1Q10570 1443 aaKnown RBP26.02■■□□□ 1.76
ATG9A-222ENST00000488833 MON2Q7Z3U7 1717 aa26.02■■□□□ 1.76
ATG9A-222ENST00000488833 TTC21AQ8NDW8 1320 aa26.01■■□□□ 1.75
ATG9A-222ENST00000488833 THRAP3Q9Y2W1 955 aaKnown RBP26.01■■□□□ 1.75
ATG9A-222ENST00000488833 COL18A1P39060 1754 aa26■■□□□ 1.75
ATG9A-222ENST00000488833 PARP4Q9UKK3 1724 aaKnown RBP26■■□□□ 1.75
ATG9A-222ENST00000488833 TRIM37O94972 964 aa25.99■■□□□ 1.75
ATG9A-222ENST00000488833 SOX12O15370 315 aa25.98■■□□□ 1.75
ATG9A-222ENST00000488833 KCNH5Q8NCM2 988 aa25.97■■□□□ 1.75
ATG9A-222ENST00000488833 PSDA5PKW4 1024 aaPredicted RBP25.96■■□□□ 1.75
ATG9A-222ENST00000488833 NFAT5O94916 1531 aa25.95■■□□□ 1.74
ATG9A-222ENST00000488833 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
ATG9A-222ENST00000488833 TOM1L2Q6ZVM7 507 aa25.94■■□□□ 1.74
ATG9A-222ENST00000488833 LRRC37A3O60309 1634 aa25.94■■□□□ 1.74
ATG9A-222ENST00000488833 RGPD5Q99666 1765 aa25.94■■□□□ 1.74
ATG9A-222ENST00000488833 WNK3Q9BYP7 1800 aa25.93■■□□□ 1.74
ATG9A-222ENST00000488833 CD163L1Q9NR16 1453 aa25.93■■□□□ 1.74
ATG9A-222ENST00000488833 EZH2Q15910 746 aaKnown RBP25.93■■□□□ 1.74
ATG9A-222ENST00000488833 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms