RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 GLI3P10071 1580 aa22.15■■□□□ 1.14
TRIM50-203ENST00000488217 ACEP12821 1306 aa22.14■■□□□ 1.14
TRIM50-203ENST00000488217 PRDM11Q9NQV5 511 aa22.14■■□□□ 1.13
TRIM50-203ENST00000488217 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.13
TRIM50-203ENST00000488217 DEFB132Q7Z7B7 95 aa22.13■■□□□ 1.13
TRIM50-203ENST00000488217 NUTM2GQ5VZR2 741 aa22.12■■□□□ 1.13
TRIM50-203ENST00000488217 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
TRIM50-203ENST00000488217 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
TRIM50-203ENST00000488217 ZC3H6P61129 1189 aaKnown RBP22.1■■□□□ 1.13
TRIM50-203ENST00000488217 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
TRIM50-203ENST00000488217 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
TRIM50-203ENST00000488217 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
TRIM50-203ENST00000488217 SRPK2P78362 688 aaKnown RBP22.09■■□□□ 1.13
TRIM50-203ENST00000488217 CHRNA2Q15822 529 aa22.08■■□□□ 1.13
TRIM50-203ENST00000488217 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.12
TRIM50-203ENST00000488217 CENPJQ9HC77 1338 aaPredicted RBP22.07■■□□□ 1.12
TRIM50-203ENST00000488217 EVA1CP58658 441 aa22.07■■□□□ 1.12
TRIM50-203ENST00000488217 CABP2Q9NPB3 220 aa22.07■■□□□ 1.12
TRIM50-203ENST00000488217 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
TRIM50-203ENST00000488217 ATP7BP35670 1465 aa22.07■■□□□ 1.12
TRIM50-203ENST00000488217 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
TRIM50-203ENST00000488217 STRN4Q9NRL3 753 aa22.05■■□□□ 1.12
TRIM50-203ENST00000488217 TRPM3Q9HCF6 1732 aaPredicted RBP22.04■■□□□ 1.12
TRIM50-203ENST00000488217 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
TRIM50-203ENST00000488217 SPATA31A1Q5TZJ5 1347 aa22.04■■□□□ 1.12
TRIM50-203ENST00000488217 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
TRIM50-203ENST00000488217 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
TRIM50-203ENST00000488217 CABP1Q9NZU7 370 aa22.03■■□□□ 1.12
TRIM50-203ENST00000488217 BAG6P46379 1132 aa22.02■■□□□ 1.12
TRIM50-203ENST00000488217 NWD2Q9ULI1 1742 aa22.02■■□□□ 1.12
TRIM50-203ENST00000488217 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
TRIM50-203ENST00000488217 GCP02774 474 aa22■■□□□ 1.11
TRIM50-203ENST00000488217 USP35Q9P2H5 1018 aa21.99■■□□□ 1.11
TRIM50-203ENST00000488217 PLCH1Q4KWH8 1693 aa21.98■■□□□ 1.11
TRIM50-203ENST00000488217 COL14A1Q05707 1796 aaKnown RBP21.98■■□□□ 1.11
TRIM50-203ENST00000488217 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
TRIM50-203ENST00000488217 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
TRIM50-203ENST00000488217 EN1Q05925 392 aaPredicted RBP21.97■■□□□ 1.11
TRIM50-203ENST00000488217 NLRP6P59044 892 aa21.96■■□□□ 1.11
TRIM50-203ENST00000488217 LARP1Q6PKG0 1096 aaKnown RBP21.96■■□□□ 1.11
TRIM50-203ENST00000488217 FAM196AQ6ZSG2 479 aa21.96■■□□□ 1.11
TRIM50-203ENST00000488217 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
TRIM50-203ENST00000488217 ABCA3Q99758 1704 aa21.95■■□□□ 1.1
TRIM50-203ENST00000488217 USP19O94966 1318 aa21.95■■□□□ 1.1
TRIM50-203ENST00000488217 EVC2Q86UK5 1308 aa21.95■■□□□ 1.1
TRIM50-203ENST00000488217 BRD4O60885 1362 aaPredicted RBP21.95■■□□□ 1.1
TRIM50-203ENST00000488217 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
TRIM50-203ENST00000488217 PDE3BQ13370 1112 aa21.94■■□□□ 1.1
TRIM50-203ENST00000488217 TCP11L2Q8N4U5 519 aa21.94■■□□□ 1.1
TRIM50-203ENST00000488217 CPDO75976 1380 aa21.94■■□□□ 1.1
TRIM50-203ENST00000488217 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
TRIM50-203ENST00000488217 ZNF692Q9BU19 519 aaPredicted RBP21.93■■□□□ 1.1
TRIM50-203ENST00000488217 TRIM37O94972 964 aa21.92■■□□□ 1.1
TRIM50-203ENST00000488217 THRAP3Q9Y2W1 955 aaKnown RBP21.91■■□□□ 1.1
TRIM50-203ENST00000488217 NRAPQ86VF7 1730 aa21.9■■□□□ 1.1
TRIM50-203ENST00000488217 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.09
TRIM50-203ENST00000488217 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.09
TRIM50-203ENST00000488217 SSH2Q76I76 1423 aa21.89■■□□□ 1.09
TRIM50-203ENST00000488217 ROCK2O75116 1388 aaKnown RBP21.88■■□□□ 1.09
TRIM50-203ENST00000488217 ITSN1Q15811 1721 aa21.88■■□□□ 1.09
TRIM50-203ENST00000488217 APBA3O96018 575 aa21.87■■□□□ 1.09
TRIM50-203ENST00000488217 EZH2Q15910 746 aaKnown RBP21.87■■□□□ 1.09
TRIM50-203ENST00000488217 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
TRIM50-203ENST00000488217 CAMTA1Q9Y6Y1 1673 aa21.86■■□□□ 1.09
TRIM50-203ENST00000488217 USP6P35125 1406 aa21.86■■□□□ 1.09
TRIM50-203ENST00000488217 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
TRIM50-203ENST00000488217 CRYBG1Q9Y4K1 1723 aa21.84■■□□□ 1.09
TRIM50-203ENST00000488217 AATKQ6ZMQ8 1374 aa21.84■■□□□ 1.09
TRIM50-203ENST00000488217 R3HDM1Q15032 1099 aaKnown RBP21.83■■□□□ 1.09
TRIM50-203ENST00000488217 KCNH5Q8NCM2 988 aa21.82■■□□□ 1.08
TRIM50-203ENST00000488217 AXIN2Q9Y2T1 843 aa21.82■■□□□ 1.08
TRIM50-203ENST00000488217 TOPAZ1Q8N9V7 1692 aa21.82■■□□□ 1.08
TRIM50-203ENST00000488217 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
TRIM50-203ENST00000488217 TOM1L2Q6ZVM7 507 aa21.81■■□□□ 1.08
TRIM50-203ENST00000488217 ARHGEF25Q86VW2 580 aa21.81■■□□□ 1.08
TRIM50-203ENST00000488217 DISP2A7MBM2 1401 aa21.8■■□□□ 1.08
TRIM50-203ENST00000488217 THSD7AQ9UPZ6 1657 aa21.8■■□□□ 1.08
TRIM50-203ENST00000488217 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
TRIM50-203ENST00000488217 TTC21AQ8NDW8 1320 aa21.79■■□□□ 1.08
TRIM50-203ENST00000488217 PHRF1Q9P1Y6 1649 aaKnown RBP21.78■■□□□ 1.08
TRIM50-203ENST00000488217 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.08
TRIM50-203ENST00000488217 SOX12O15370 315 aa21.77■■□□□ 1.08
TRIM50-203ENST00000488217 DDB1Q16531 1140 aa21.77■■□□□ 1.08
TRIM50-203ENST00000488217 CRB1P82279 1406 aa21.77■■□□□ 1.08
TRIM50-203ENST00000488217 NRKQ7Z2Y5 1582 aa21.76■■□□□ 1.07
TRIM50-203ENST00000488217 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
TRIM50-203ENST00000488217 CDCA7Q9BWT1 371 aaPredicted RBP21.75■■□□□ 1.07
TRIM50-203ENST00000488217 WDR17Q8IZU2 1322 aa21.75■■□□□ 1.07
TRIM50-203ENST00000488217 KTN1Q86UP2 1357 aaKnown RBP21.74■■□□□ 1.07
TRIM50-203ENST00000488217 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
TRIM50-203ENST00000488217 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
TRIM50-203ENST00000488217 TMC1Q8TDI8 760 aa21.74■■□□□ 1.07
TRIM50-203ENST00000488217 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
TRIM50-203ENST00000488217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.73■■□□□ 1.07
TRIM50-203ENST00000488217 CARD10Q9BWT7 1032 aa21.73■■□□□ 1.07
TRIM50-203ENST00000488217 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
TRIM50-203ENST00000488217 SLC12A5Q9H2X9 1139 aa21.72■■□□□ 1.07
TRIM50-203ENST00000488217 LMO7Q8WWI1 1683 aa21.71■■□□□ 1.07
TRIM50-203ENST00000488217 SLIT3O75094 1523 aa21.7■■□□□ 1.07
TRIM50-203ENST00000488217 TRPM1Q7Z4N2 1603 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms