RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 BLMP54132 1417 aaPredicted RBP24.78■■□□□ 1.56
ITSN1-230ENST00000488166 SF3B2Q13435 895 aaKnown RBP24.78■■□□□ 1.56
ITSN1-230ENST00000488166 BTG4Q9NY30 223 aa24.76■■□□□ 1.55
ITSN1-230ENST00000488166 CRYBG1Q9Y4K1 1723 aa24.75■■□□□ 1.55
ITSN1-230ENST00000488166 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
ITSN1-230ENST00000488166 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
ITSN1-230ENST00000488166 ONECUT3O60422 494 aaPredicted RBP24.72■■□□□ 1.55
ITSN1-230ENST00000488166 NUDT16Q96DE0 195 aaKnown RBP24.72■■□□□ 1.55
ITSN1-230ENST00000488166 ATP7BP35670 1465 aa24.71■■□□□ 1.55
ITSN1-230ENST00000488166 FAM98CQ17RN3 349 aaKnown RBP24.71■■□□□ 1.55
ITSN1-230ENST00000488166 DEFB132Q7Z7B7 95 aa24.71■■□□□ 1.55
ITSN1-230ENST00000488166 PHRF1Q9P1Y6 1649 aaKnown RBP24.68■■□□□ 1.54
ITSN1-230ENST00000488166 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
ITSN1-230ENST00000488166 PRDM11Q9NQV5 511 aa24.68■■□□□ 1.54
ITSN1-230ENST00000488166 TOPAZ1Q8N9V7 1692 aa24.68■■□□□ 1.54
ITSN1-230ENST00000488166 SRCAPQ6ZRS2 3230 aa24.65■■□□□ 1.54
ITSN1-230ENST00000488166 NUTM2GQ5VZR2 741 aa24.63■■□□□ 1.53
ITSN1-230ENST00000488166 SPATA31A5Q5VU36 1347 aa24.62■■□□□ 1.53
ITSN1-230ENST00000488166 SPATA31A7Q8IWB4 1347 aa24.62■■□□□ 1.53
ITSN1-230ENST00000488166 RGPD1P0DJD0 1748 aa24.62■■□□□ 1.53
ITSN1-230ENST00000488166 KIAA0232Q92628 1395 aa24.62■■□□□ 1.53
ITSN1-230ENST00000488166 ACEP12821 1306 aa24.61■■□□□ 1.53
ITSN1-230ENST00000488166 BAG6P46379 1132 aa24.61■■□□□ 1.53
ITSN1-230ENST00000488166 CHRNA2Q15822 529 aa24.61■■□□□ 1.53
ITSN1-230ENST00000488166 ZC3H6P61129 1189 aaKnown RBP24.6■■□□□ 1.53
ITSN1-230ENST00000488166 NBPF1Q3BBV0 1214 aa24.6■■□□□ 1.53
ITSN1-230ENST00000488166 STRN4Q9NRL3 753 aa24.6■■□□□ 1.53
ITSN1-230ENST00000488166 CCDC61Q9Y6R9 512 aa24.6■■□□□ 1.53
ITSN1-230ENST00000488166 FAM182BQ5T319 152 aa24.59■■□□□ 1.53
ITSN1-230ENST00000488166 THSD7AQ9UPZ6 1657 aa24.59■■□□□ 1.53
ITSN1-230ENST00000488166 POLR3AO14802 1390 aaPredicted RBP24.58■■□□□ 1.53
ITSN1-230ENST00000488166 NBPF8Q3BBV2 869 aa24.58■■□□□ 1.53
ITSN1-230ENST00000488166 QRICH2Q9H0J4 1663 aa24.58■■□□□ 1.53
ITSN1-230ENST00000488166 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
ITSN1-230ENST00000488166 ABTB2Q8N961 1025 aa24.56■■□□□ 1.52
ITSN1-230ENST00000488166 PLEKHG3A1L390 1219 aa24.55■■□□□ 1.52
ITSN1-230ENST00000488166 EVA1CP58658 441 aa24.54■■□□□ 1.52
ITSN1-230ENST00000488166 SPATA31A1Q5TZJ5 1347 aa24.54■■□□□ 1.52
ITSN1-230ENST00000488166 CENPJQ9HC77 1338 aaPredicted RBP24.54■■□□□ 1.52
ITSN1-230ENST00000488166 NRKQ7Z2Y5 1582 aa24.54■■□□□ 1.52
ITSN1-230ENST00000488166 PPIP5K1Q6PFW1 1433 aa24.53■■□□□ 1.52
ITSN1-230ENST00000488166 USP35Q9P2H5 1018 aa24.53■■□□□ 1.52
ITSN1-230ENST00000488166 TNS1Q9HBL0 1735 aaKnown RBP24.52■■□□□ 1.52
ITSN1-230ENST00000488166 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
ITSN1-230ENST00000488166 PSDA5PKW4 1024 aaPredicted RBP24.5■■□□□ 1.51
ITSN1-230ENST00000488166 EN1Q05925 392 aaPredicted RBP24.5■■□□□ 1.51
ITSN1-230ENST00000488166 NLRP13Q86W25 1043 aa24.48■■□□□ 1.51
ITSN1-230ENST00000488166 SSH2Q76I76 1423 aa24.47■■□□□ 1.51
ITSN1-230ENST00000488166 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
ITSN1-230ENST00000488166 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
ITSN1-230ENST00000488166 LRP5O75197 1615 aa24.46■■□□□ 1.51
ITSN1-230ENST00000488166 ZBTB7CA1YPR0 619 aa24.45■■□□□ 1.5
ITSN1-230ENST00000488166 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
ITSN1-230ENST00000488166 USP19O94966 1318 aa24.44■■□□□ 1.5
ITSN1-230ENST00000488166 TRIM37O94972 964 aa24.44■■□□□ 1.5
ITSN1-230ENST00000488166 LARP1Q6PKG0 1096 aaKnown RBP24.44■■□□□ 1.5
ITSN1-230ENST00000488166 FAM196AQ6ZSG2 479 aa24.44■■□□□ 1.5
ITSN1-230ENST00000488166 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
ITSN1-230ENST00000488166 CPDO75976 1380 aa24.43■■□□□ 1.5
ITSN1-230ENST00000488166 GCP02774 474 aa24.43■■□□□ 1.5
ITSN1-230ENST00000488166 PDE3BQ13370 1112 aa24.43■■□□□ 1.5
ITSN1-230ENST00000488166 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
ITSN1-230ENST00000488166 BARGINQ6ZT62 677 aa24.41■■□□□ 1.5
ITSN1-230ENST00000488166 BRD4O60885 1362 aaPredicted RBP24.41■■□□□ 1.5
ITSN1-230ENST00000488166 NLRP6P59044 892 aa24.4■■□□□ 1.5
ITSN1-230ENST00000488166 NEUROD1Q13562 356 aa24.4■■□□□ 1.5
ITSN1-230ENST00000488166 EZH2Q15910 746 aaKnown RBP24.4■■□□□ 1.5
ITSN1-230ENST00000488166 TCP11L2Q8N4U5 519 aa24.4■■□□□ 1.5
ITSN1-230ENST00000488166 SIN3AQ96ST3 1273 aa24.4■■□□□ 1.5
ITSN1-230ENST00000488166 DISP2A7MBM2 1401 aa24.4■■□□□ 1.5
ITSN1-230ENST00000488166 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
ITSN1-230ENST00000488166 USP6P35125 1406 aa24.39■■□□□ 1.5
ITSN1-230ENST00000488166 APBA3O96018 575 aa24.38■■□□□ 1.49
ITSN1-230ENST00000488166 R3HDM1Q15032 1099 aaKnown RBP24.38■■□□□ 1.49
ITSN1-230ENST00000488166 PARP4Q9UKK3 1724 aaKnown RBP24.37■■□□□ 1.49
ITSN1-230ENST00000488166 COL5A2P05997 1499 aaPredicted RBP24.37■■□□□ 1.49
ITSN1-230ENST00000488166 PIK3C2AO00443 1686 aa24.37■■□□□ 1.49
ITSN1-230ENST00000488166 THRAP3Q9Y2W1 955 aaKnown RBP24.36■■□□□ 1.49
ITSN1-230ENST00000488166 ROCK2O75116 1388 aaKnown RBP24.36■■□□□ 1.49
ITSN1-230ENST00000488166 AKAP12Q02952 1782 aa24.36■■□□□ 1.49
ITSN1-230ENST00000488166 SLIT3O75094 1523 aa24.34■■□□□ 1.49
ITSN1-230ENST00000488166 RGPD5Q99666 1765 aa24.34■■□□□ 1.49
ITSN1-230ENST00000488166 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
ITSN1-230ENST00000488166 CRB1P82279 1406 aa24.33■■□□□ 1.49
ITSN1-230ENST00000488166 RREB1Q92766 1687 aa24.33■■□□□ 1.49
ITSN1-230ENST00000488166 PARD3Q8TEW0 1356 aa24.3■■□□□ 1.48
ITSN1-230ENST00000488166 NUP188Q5SRE5 1749 aa24.3■■□□□ 1.48
ITSN1-230ENST00000488166 COL18A1P39060 1754 aa24.3■■□□□ 1.48
ITSN1-230ENST00000488166 WNK3Q9BYP7 1800 aa24.3■■□□□ 1.48
ITSN1-230ENST00000488166 AATKQ6ZMQ8 1374 aa24.29■■□□□ 1.48
ITSN1-230ENST00000488166 TOM1L2Q6ZVM7 507 aa24.29■■□□□ 1.48
ITSN1-230ENST00000488166 ZNF692Q9BU19 519 aaPredicted RBP24.29■■□□□ 1.48
ITSN1-230ENST00000488166 SBF2Q86WG5 1849 aa24.28■■□□□ 1.48
ITSN1-230ENST00000488166 SOX12O15370 315 aa24.28■■□□□ 1.48
ITSN1-230ENST00000488166 LRRC37A3O60309 1634 aa24.27■■□□□ 1.48
ITSN1-230ENST00000488166 TTC21BQ7Z4L5 1316 aa24.26■■□□□ 1.47
ITSN1-230ENST00000488166 DDB1Q16531 1140 aa24.24■■□□□ 1.47
ITSN1-230ENST00000488166 NBPF14Q5TI25 921 aa24.24■■□□□ 1.47
ITSN1-230ENST00000488166 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
ITSN1-230ENST00000488166 OVOS2A0A0G2JMS6 1433 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms