RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
USP48-209ENST00000487880 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
USP48-209ENST00000487880 FKBPLQ9UIM3 349 aa10.93□□□□□ -0.66
USP48-209ENST00000487880 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
USP48-209ENST00000487880 IRF5Q13568 498 aa10.92□□□□□ -0.66
USP48-209ENST00000487880 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
USP48-209ENST00000487880 A0A0G2JS52 829 aa10.91□□□□□ -0.66
USP48-209ENST00000487880 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
USP48-209ENST00000487880 ABL2P42684 1182 aa10.9□□□□□ -0.66
USP48-209ENST00000487880 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.66
USP48-209ENST00000487880 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
USP48-209ENST00000487880 TRAK2O60296 914 aa10.88□□□□□ -0.67
USP48-209ENST00000487880 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
USP48-209ENST00000487880 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
USP48-209ENST00000487880 RPIAP49247 311 aa10.86□□□□□ -0.67
USP48-209ENST00000487880 TRIM32Q13049 653 aa10.85□□□□□ -0.67
USP48-209ENST00000487880 PDXDC2PQ6P474 469 aa10.85□□□□□ -0.67
USP48-209ENST00000487880 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
USP48-209ENST00000487880 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
USP48-209ENST00000487880 BAP1Q92560 729 aa10.84□□□□□ -0.67
USP48-209ENST00000487880 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
USP48-209ENST00000487880 RGS20O76081 388 aa10.83□□□□□ -0.68
USP48-209ENST00000487880 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
USP48-209ENST00000487880 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
USP48-209ENST00000487880 WWC1Q8IX03 1113 aa10.83□□□□□ -0.68
USP48-209ENST00000487880 ZNF511Q8NB15 262 aa10.83□□□□□ -0.68
USP48-209ENST00000487880 ZBBXA8MT70 800 aa10.82□□□□□ -0.68
USP48-209ENST00000487880 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
USP48-209ENST00000487880 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
USP48-209ENST00000487880 SH3RF1Q7Z6J0 888 aa10.82□□□□□ -0.68
USP48-209ENST00000487880 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
USP48-209ENST00000487880 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
USP48-209ENST00000487880 WNT7BP56706 349 aa10.8□□□□□ -0.68
USP48-209ENST00000487880 SH3BP2P78314 561 aa10.8□□□□□ -0.68
USP48-209ENST00000487880 PTK2Q05397 1052 aa10.8□□□□□ -0.68
USP48-209ENST00000487880 NR1H3Q13133 447 aa10.8□□□□□ -0.68
USP48-209ENST00000487880 SKOR1P84550 965 aa10.79□□□□□ -0.68
USP48-209ENST00000487880 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
USP48-209ENST00000487880 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
USP48-209ENST00000487880 SLC19A1P41440 591 aa10.78□□□□□ -0.68
USP48-209ENST00000487880 VAC14Q08AM6 782 aa10.78□□□□□ -0.68
USP48-209ENST00000487880 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
USP48-209ENST00000487880 CD2BP2O95400 341 aaKnown RBP10.77□□□□□ -0.69
USP48-209ENST00000487880 BPHLQ86WA6 291 aaPredicted RBP10.77□□□□□ -0.69
USP48-209ENST00000487880 ARHGAP9Q9BRR9 750 aa10.77□□□□□ -0.69
USP48-209ENST00000487880 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
USP48-209ENST00000487880 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
USP48-209ENST00000487880 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
USP48-209ENST00000487880 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
USP48-209ENST00000487880 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
USP48-209ENST00000487880 ADAMTS19Q8TE59 1207 aa10.74□□□□□ -0.69
USP48-209ENST00000487880 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
USP48-209ENST00000487880 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
USP48-209ENST00000487880 SOX11P35716 441 aa10.73□□□□□ -0.69
USP48-209ENST00000487880 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
USP48-209ENST00000487880 ALG2Q9H553 416 aa10.73□□□□□ -0.69
USP48-209ENST00000487880 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP48-209ENST00000487880 ERFEQ4G0M1 354 aa10.72□□□□□ -0.69
USP48-209ENST00000487880 MAGEB6P1A0A0J9YX57 407 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
USP48-209ENST00000487880 AGERQ15109 404 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 RC3H1Q5TC82 1133 aaKnown RBP10.71□□□□□ -0.69
USP48-209ENST00000487880 ZBTB33Q86T24 672 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
USP48-209ENST00000487880 GLMNQ92990 594 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 CARD14Q9BXL6 1004 aa10.71□□□□□ -0.69
USP48-209ENST00000487880 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
USP48-209ENST00000487880 WNT7AO00755 349 aa10.7□□□□□ -0.7
USP48-209ENST00000487880 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
USP48-209ENST00000487880 MCCD1P59942 119 aaPredicted RBP10.69□□□□□ -0.7
USP48-209ENST00000487880 ZNF697Q5TEC3 545 aa10.68□□□□□ -0.7
USP48-209ENST00000487880 HDGFL1Q5TGJ6 251 aa10.68□□□□□ -0.7
USP48-209ENST00000487880 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
USP48-209ENST00000487880 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
USP48-209ENST00000487880 FAM174AQ8TBP5 190 aa10.67□□□□□ -0.7
USP48-209ENST00000487880 PKD2L1Q9P0L9 805 aa10.67□□□□□ -0.7
USP48-209ENST00000487880 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
USP48-209ENST00000487880 SIAH2O43255 324 aa10.66□□□□□ -0.7
USP48-209ENST00000487880 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
USP48-209ENST00000487880 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
USP48-209ENST00000487880 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
USP48-209ENST00000487880 MPNDQ8N594 471 aa10.65□□□□□ -0.7
USP48-209ENST00000487880 MRGPRX2Q96LB1 330 aa10.65□□□□□ -0.7
USP48-209ENST00000487880 MAP4K5Q9Y4K4 846 aa10.65□□□□□ -0.7
USP48-209ENST00000487880 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
USP48-209ENST00000487880 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
USP48-209ENST00000487880 CDV3Q9UKY7 258 aaKnown RBP10.64□□□□□ -0.71
USP48-209ENST00000487880 UCN2Q96RP3 112 aa10.63□□□□□ -0.71
USP48-209ENST00000487880 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
USP48-209ENST00000487880 GDF9O60383 454 aa10.62□□□□□ -0.71
USP48-209ENST00000487880 CCDC82Q8N4S0 544 aa10.62□□□□□ -0.71
USP48-209ENST00000487880 ESPNB1AK53 854 aa10.61□□□□□ -0.71
USP48-209ENST00000487880 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
USP48-209ENST00000487880 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
USP48-209ENST00000487880 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
USP48-209ENST00000487880 TLL2Q9Y6L7 1015 aa10.61□□□□□ -0.71
USP48-209ENST00000487880 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
USP48-209ENST00000487880 PRR20EP86478 221 aa10.59□□□□□ -0.71
USP48-209ENST00000487880 PRR20CP86479 221 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms