RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZNF511Q8NB15 262 aa9.98□□□□□ -0.81
CCDC66-221ENST00000487739 TSC1Q92574 1164 aa9.98□□□□□ -0.81
CCDC66-221ENST00000487739 POTECB2RU33 542 aa9.97□□□□□ -0.81
CCDC66-221ENST00000487739 SIAH2O43255 324 aa9.97□□□□□ -0.81
CCDC66-221ENST00000487739 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
CCDC66-221ENST00000487739 F12P00748 615 aaPredicted RBP9.96□□□□□ -0.82
CCDC66-221ENST00000487739 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
CCDC66-221ENST00000487739 HPS1Q92902 700 aa9.96□□□□□ -0.82
CCDC66-221ENST00000487739 GPBP1L1Q9HC44 474 aaPredicted RBP9.96□□□□□ -0.82
CCDC66-221ENST00000487739 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
CCDC66-221ENST00000487739 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
CCDC66-221ENST00000487739 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
CCDC66-221ENST00000487739 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
CCDC66-221ENST00000487739 VARSP26640 1264 aaKnown RBP9.94□□□□□ -0.82
CCDC66-221ENST00000487739 WASF2Q9Y6W5 498 aa9.94□□□□□ -0.82
CCDC66-221ENST00000487739 PER1O15534 1290 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-221ENST00000487739 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-221ENST00000487739 SH3D19Q5HYK7 790 aa9.92□□□□□ -0.82
CCDC66-221ENST00000487739 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-221ENST00000487739 GMPR2Q9P2T1 348 aaKnown RBP9.92□□□□□ -0.82
CCDC66-221ENST00000487739 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
CCDC66-221ENST00000487739 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
CCDC66-221ENST00000487739 FAM117AQ9C073 453 aa9.91□□□□□ -0.82
CCDC66-221ENST00000487739 TLL2Q9Y6L7 1015 aa9.91□□□□□ -0.82
CCDC66-221ENST00000487739 ARMC2Q8NEN0 867 aa9.9□□□□□ -0.82
CCDC66-221ENST00000487739 ATP13A2Q9NQ11 1180 aa9.9□□□□□ -0.82
CCDC66-221ENST00000487739 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
CCDC66-221ENST00000487739 MPNDQ8N594 471 aa9.89□□□□□ -0.83
CCDC66-221ENST00000487739 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
CCDC66-221ENST00000487739 AGERQ15109 404 aa9.87□□□□□ -0.83
CCDC66-221ENST00000487739 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-221ENST00000487739 FOXJ1Q92949 421 aa9.87□□□□□ -0.83
CCDC66-221ENST00000487739 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
CCDC66-221ENST00000487739 ATP1B4Q9UN42 357 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-221ENST00000487739 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
CCDC66-221ENST00000487739 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC66-221ENST00000487739 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-221ENST00000487739 NNTQ13423 1086 aa9.84□□□□□ -0.83
CCDC66-221ENST00000487739 PROCA1Q8NCQ7 364 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-221ENST00000487739 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
CCDC66-221ENST00000487739 ADH1CP00326 375 aa9.83□□□□□ -0.84
CCDC66-221ENST00000487739 CTDSPL2Q05D32 466 aa9.83□□□□□ -0.84
CCDC66-221ENST00000487739 PPP2R2DQ66LE6 453 aa9.83□□□□□ -0.84
CCDC66-221ENST00000487739 KIFC2Q96AC6 838 aa9.83□□□□□ -0.84
CCDC66-221ENST00000487739 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
CCDC66-221ENST00000487739 GPKOWQ92917 476 aaPredicted RBP eCLIP9.82□□□□□ -0.84
CCDC66-221ENST00000487739 CDK15Q96Q40 435 aa9.82□□□□□ -0.84
CCDC66-221ENST00000487739 ARID5BQ14865 1188 aa9.81□□□□□ -0.84
CCDC66-221ENST00000487739 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
CCDC66-221ENST00000487739 SH3RF1Q7Z6J0 888 aa9.8□□□□□ -0.84
CCDC66-221ENST00000487739 BMP1P13497 986 aa9.79□□□□□ -0.84
CCDC66-221ENST00000487739 SNRPBP14678 240 aaKnown RBP9.79□□□□□ -0.84
CCDC66-221ENST00000487739 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
CCDC66-221ENST00000487739 FBXO31Q5XUX0 539 aaPredicted RBP9.79□□□□□ -0.84
CCDC66-221ENST00000487739 LRRN4Q8WUT4 740 aa9.79□□□□□ -0.84
CCDC66-221ENST00000487739 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
CCDC66-221ENST00000487739 WDR4P57081 412 aaKnown RBP9.78□□□□□ -0.84
CCDC66-221ENST00000487739 NR5A1Q13285 461 aa9.78□□□□□ -0.84
CCDC66-221ENST00000487739 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
CCDC66-221ENST00000487739 AP1G2O75843 785 aa9.77□□□□□ -0.85
CCDC66-221ENST00000487739 TRIM46Q7Z4K8 759 aa9.77□□□□□ -0.85
CCDC66-221ENST00000487739 TIMP2P16035 220 aa9.76□□□□□ -0.85
CCDC66-221ENST00000487739 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
CCDC66-221ENST00000487739 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
CCDC66-221ENST00000487739 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
CCDC66-221ENST00000487739 FKBPLQ9UIM3 349 aa9.76□□□□□ -0.85
CCDC66-221ENST00000487739 MAP4K5Q9Y4K4 846 aa9.76□□□□□ -0.85
CCDC66-221ENST00000487739 PDXDC2PQ6P474 469 aa9.75□□□□□ -0.85
CCDC66-221ENST00000487739 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
CCDC66-221ENST00000487739 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
CCDC66-221ENST00000487739 ZC3H4Q9UPT8 1303 aaKnown RBP9.75□□□□□ -0.85
CCDC66-221ENST00000487739 GRM5P41594 1212 aa9.74□□□□□ -0.85
CCDC66-221ENST00000487739 NR6A1Q15406 480 aa9.74□□□□□ -0.85
CCDC66-221ENST00000487739 VASH1Q7L8A9 365 aaPredicted RBP9.74□□□□□ -0.85
CCDC66-221ENST00000487739 KLF16Q9BXK1 252 aaPredicted RBP9.74□□□□□ -0.85
CCDC66-221ENST00000487739 NR3C2P08235 984 aa9.73□□□□□ -0.85
CCDC66-221ENST00000487739 FSHRP23945 695 aa9.73□□□□□ -0.85
CCDC66-221ENST00000487739 RFC5P40937 340 aa9.73□□□□□ -0.85
CCDC66-221ENST00000487739 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
CCDC66-221ENST00000487739 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
CCDC66-221ENST00000487739 WFS1O76024 890 aa9.72□□□□□ -0.85
CCDC66-221ENST00000487739 ZIC2O95409 532 aaPredicted RBP9.72□□□□□ -0.85
CCDC66-221ENST00000487739 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
CCDC66-221ENST00000487739 SCARF1Q14162 830 aa9.72□□□□□ -0.85
CCDC66-221ENST00000487739 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
CCDC66-221ENST00000487739 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
CCDC66-221ENST00000487739 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
CCDC66-221ENST00000487739 IL27Q8NEV9 243 aa9.71□□□□□ -0.86
CCDC66-221ENST00000487739 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
CCDC66-221ENST00000487739 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
CCDC66-221ENST00000487739 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-221ENST00000487739 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
CCDC66-221ENST00000487739 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
CCDC66-221ENST00000487739 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
CCDC66-221ENST00000487739 PTK2Q05397 1052 aa9.69□□□□□ -0.86
CCDC66-221ENST00000487739 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
CCDC66-221ENST00000487739 CDV3Q9UKY7 258 aaKnown RBP9.69□□□□□ -0.86
CCDC66-221ENST00000487739 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
CCDC66-221ENST00000487739 TERTO14746 1132 aaKnown RBP9.68□□□□□ -0.86
CCDC66-221ENST00000487739 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms