RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 CENPJQ9HC77 1338 aaPredicted RBP35.79■■■■□ 3.32
SEMA3C-209ENST00000487621 CRYBG1Q9Y4K1 1723 aa35.78■■■■□ 3.32
SEMA3C-209ENST00000487621 PLEKHG3A1L390 1219 aa35.78■■■■□ 3.32
SEMA3C-209ENST00000487621 PAK3O75914 559 aaPredicted RBP35.76■■■■□ 3.32
SEMA3C-209ENST00000487621 ACEP12821 1306 aa35.75■■■■□ 3.31
SEMA3C-209ENST00000487621 NEUROD1Q13562 356 aa35.73■■■■□ 3.31
SEMA3C-209ENST00000487621 NBPF8Q3BBV2 869 aa35.73■■■■□ 3.31
SEMA3C-209ENST00000487621 ONECUT3O60422 494 aaPredicted RBP35.72■■■■□ 3.31
SEMA3C-209ENST00000487621 TRPM1Q7Z4N2 1603 aa35.72■■■■□ 3.31
SEMA3C-209ENST00000487621 NRAPQ86VF7 1730 aa35.71■■■■□ 3.31
SEMA3C-209ENST00000487621 COL14A1Q05707 1796 aaKnown RBP35.69■■■■□ 3.3
SEMA3C-209ENST00000487621 BTG4Q9NY30 223 aa35.69■■■■□ 3.3
SEMA3C-209ENST00000487621 QRICH2Q9H0J4 1663 aa35.68■■■■□ 3.3
SEMA3C-209ENST00000487621 CABP2Q9NPB3 220 aa35.67■■■■□ 3.3
SEMA3C-209ENST00000487621 SRPK2P78362 688 aaKnown RBP35.66■■■■□ 3.3
SEMA3C-209ENST00000487621 SEPT12Q8IYM1 358 aa35.66■■■■□ 3.3
SEMA3C-209ENST00000487621 PPIP5K1Q6PFW1 1433 aa35.65■■■■□ 3.3
SEMA3C-209ENST00000487621 CCDC9Q9Y3X0 531 aaKnown RBP35.64■■■■□ 3.3
SEMA3C-209ENST00000487621 PHRF1Q9P1Y6 1649 aaKnown RBP35.62■■■■□ 3.29
SEMA3C-209ENST00000487621 BRWD3Q6RI45 1802 aa35.62■■■■□ 3.29
SEMA3C-209ENST00000487621 NUTM2GQ5VZR2 741 aa35.61■■■■□ 3.29
SEMA3C-209ENST00000487621 CCDC125Q86Z20 511 aa35.61■■■■□ 3.29
SEMA3C-209ENST00000487621 ROCK2O75116 1388 aaKnown RBP35.61■■■■□ 3.29
SEMA3C-209ENST00000487621 PRDM11Q9NQV5 511 aa35.6■■■■□ 3.29
SEMA3C-209ENST00000487621 KIAA0232Q92628 1395 aa35.6■■■■□ 3.29
SEMA3C-209ENST00000487621 USP19O94966 1318 aa35.56■■■■□ 3.28
SEMA3C-209ENST00000487621 SPATA31A5Q5VU36 1347 aa35.56■■■■□ 3.28
SEMA3C-209ENST00000487621 SPATA31A7Q8IWB4 1347 aa35.56■■■■□ 3.28
SEMA3C-209ENST00000487621 ABTB2Q8N961 1025 aa35.55■■■■□ 3.28
SEMA3C-209ENST00000487621 CABP1Q9NZU7 370 aa35.55■■■■□ 3.28
SEMA3C-209ENST00000487621 BRD4O60885 1362 aaPredicted RBP35.53■■■■□ 3.28
SEMA3C-209ENST00000487621 CHRNA2Q15822 529 aa35.53■■■■□ 3.28
SEMA3C-209ENST00000487621 FAM98CQ17RN3 349 aaKnown RBP35.53■■■■□ 3.28
SEMA3C-209ENST00000487621 NRKQ7Z2Y5 1582 aa35.53■■■■□ 3.28
SEMA3C-209ENST00000487621 EVC2Q86UK5 1308 aa35.53■■■■□ 3.28
SEMA3C-209ENST00000487621 BLMP54132 1417 aaPredicted RBP35.52■■■■□ 3.28
SEMA3C-209ENST00000487621 ZC3H6P61129 1189 aaKnown RBP35.52■■■■□ 3.28
SEMA3C-209ENST00000487621 KRT27Q7Z3Y8 459 aa35.52■■■■□ 3.28
SEMA3C-209ENST00000487621 USP6P35125 1406 aa35.5■■■■□ 3.27
SEMA3C-209ENST00000487621 CPDO75976 1380 aa35.49■■■■□ 3.27
SEMA3C-209ENST00000487621 SSH2Q76I76 1423 aa35.49■■■■□ 3.27
SEMA3C-209ENST00000487621 NLRP13Q86W25 1043 aa35.46■■■■□ 3.27
SEMA3C-209ENST00000487621 SPATA31A1Q5TZJ5 1347 aa35.45■■■■□ 3.27
SEMA3C-209ENST00000487621 THSD7AQ9UPZ6 1657 aa35.44■■■■□ 3.26
SEMA3C-209ENST00000487621 GCP02774 474 aa35.43■■■■□ 3.26
SEMA3C-209ENST00000487621 TRIM26Q12899 539 aaPredicted RBP35.43■■■■□ 3.26
SEMA3C-209ENST00000487621 A0A0G2JS52 829 aa35.42■■■■□ 3.26
SEMA3C-209ENST00000487621 MYT1Q01538 1121 aa35.42■■■■□ 3.26
SEMA3C-209ENST00000487621 CAMTA1Q9Y6Y1 1673 aa35.42■■■■□ 3.26
SEMA3C-209ENST00000487621 SBNO2Q9Y2G9 1366 aa35.41■■■■□ 3.26
SEMA3C-209ENST00000487621 LMO7Q8WWI1 1683 aa35.41■■■■□ 3.26
SEMA3C-209ENST00000487621 STRN4Q9NRL3 753 aa35.41■■■■□ 3.26
SEMA3C-209ENST00000487621 TONSLQ96HA7 1378 aa35.39■■■■□ 3.26
SEMA3C-209ENST00000487621 DEFB132Q7Z7B7 95 aa35.38■■■■□ 3.25
SEMA3C-209ENST00000487621 CARD11Q9BXL7 1154 aa35.38■■■■□ 3.25
SEMA3C-209ENST00000487621 SLIT3O75094 1523 aa35.37■■■■□ 3.25
SEMA3C-209ENST00000487621 NLRP6P59044 892 aa35.35■■■■□ 3.25
SEMA3C-209ENST00000487621 SRCAPQ6ZRS2 3230 aa35.34■■■■□ 3.25
SEMA3C-209ENST00000487621 PIK3C2AO00443 1686 aa35.34■■■■□ 3.25
SEMA3C-209ENST00000487621 CPSF1Q10570 1443 aaKnown RBP35.34■■■■□ 3.25
SEMA3C-209ENST00000487621 ZNF692Q9BU19 519 aaPredicted RBP35.34■■■■□ 3.25
SEMA3C-209ENST00000487621 ZRANB1Q9UGI0 708 aa35.33■■■■□ 3.25
SEMA3C-209ENST00000487621 LARP1Q6PKG0 1096 aaKnown RBP35.32■■■■□ 3.24
SEMA3C-209ENST00000487621 TTC21BQ7Z4L5 1316 aa35.32■■■■□ 3.24
SEMA3C-209ENST00000487621 EVA1CP58658 441 aa35.31■■■■□ 3.24
SEMA3C-209ENST00000487621 SF3B2Q13435 895 aaKnown RBP35.31■■■■□ 3.24
SEMA3C-209ENST00000487621 FAM182BQ5T319 152 aa35.31■■■■□ 3.24
SEMA3C-209ENST00000487621 AKAP12Q02952 1782 aa35.3■■■■□ 3.24
SEMA3C-209ENST00000487621 BARGINQ6ZT62 677 aa35.3■■■■□ 3.24
SEMA3C-209ENST00000487621 COL5A2P05997 1499 aaPredicted RBP35.29■■■■□ 3.24
SEMA3C-209ENST00000487621 USP35Q9P2H5 1018 aa35.27■■■■□ 3.24
SEMA3C-209ENST00000487621 AATKQ6ZMQ8 1374 aa35.26■■■■□ 3.24
SEMA3C-209ENST00000487621 TTC21AQ8NDW8 1320 aa35.25■■■■□ 3.23
SEMA3C-209ENST00000487621 TCP11L2Q8N4U5 519 aa35.24■■■■□ 3.23
SEMA3C-209ENST00000487621 KTN1Q86UP2 1357 aaKnown RBP35.23■■■■□ 3.23
SEMA3C-209ENST00000487621 CD163L1Q9NR16 1453 aa35.22■■■■□ 3.23
SEMA3C-209ENST00000487621 THRAP3Q9Y2W1 955 aaKnown RBP35.21■■■■□ 3.23
SEMA3C-209ENST00000487621 COL18A1P39060 1754 aa35.2■■■■□ 3.23
SEMA3C-209ENST00000487621 BAG6P46379 1132 aa35.19■■■■□ 3.22
SEMA3C-209ENST00000487621 MON2Q7Z3U7 1717 aa35.19■■■■□ 3.22
SEMA3C-209ENST00000487621 CRB1P82279 1406 aa35.18■■■■□ 3.22
SEMA3C-209ENST00000487621 ARHGEF25Q86VW2 580 aa35.18■■■■□ 3.22
SEMA3C-209ENST00000487621 RGPD1P0DJD0 1748 aa35.18■■■■□ 3.22
SEMA3C-209ENST00000487621 ZBTB7CA1YPR0 619 aa35.17■■■■□ 3.22
SEMA3C-209ENST00000487621 AXIN2Q9Y2T1 843 aa35.17■■■■□ 3.22
SEMA3C-209ENST00000487621 DISP2A7MBM2 1401 aa35.16■■■■□ 3.22
SEMA3C-209ENST00000487621 KCNH5Q8NCM2 988 aa35.16■■■■□ 3.22
SEMA3C-209ENST00000487621 FAM196AQ6ZSG2 479 aa35.15■■■■□ 3.22
SEMA3C-209ENST00000487621 PUS7Q96PZ0 661 aaKnown RBP35.15■■■■□ 3.22
SEMA3C-209ENST00000487621 TESK2Q96S53 571 aa35.15■■■■□ 3.22
SEMA3C-209ENST00000487621 NFAT5O94916 1531 aa35.14■■■■□ 3.22
SEMA3C-209ENST00000487621 TNS1Q9HBL0 1735 aaKnown RBP35.14■■■■□ 3.22
SEMA3C-209ENST00000487621 USP31Q70CQ4 1352 aa35.13■■■■□ 3.21
SEMA3C-209ENST00000487621 SLC12A5Q9H2X9 1139 aa35.13■■■■□ 3.21
SEMA3C-209ENST00000487621 EN1Q05925 392 aaPredicted RBP35.12■■■■□ 3.21
SEMA3C-209ENST00000487621 PDE3BQ13370 1112 aa35.11■■■■□ 3.21
SEMA3C-209ENST00000487621 TMC1Q8TDI8 760 aa35.1■■■■□ 3.21
SEMA3C-209ENST00000487621 PARP4Q9UKK3 1724 aaKnown RBP35.09■■■■□ 3.21
SEMA3C-209ENST00000487621 ST20-MTHFSA0A0A6YYL1 179 aa35.09■■■■□ 3.21
SEMA3C-209ENST00000487621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms