RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 NINLQ9Y2I6 1382 aa27.24■■□□□ 1.95
SEC22A-208ENST00000487572 ZEB1P37275 1124 aaPredicted RBP27.24■■□□□ 1.95
SEC22A-208ENST00000487572 HDGFL2Q7Z4V5 671 aaPredicted RBP27.24■■□□□ 1.95
SEC22A-208ENST00000487572 ZNF692Q9BU19 519 aaPredicted RBP27.24■■□□□ 1.95
SEC22A-208ENST00000487572 AKAP12Q02952 1782 aa27.24■■□□□ 1.95
SEC22A-208ENST00000487572 CD163L1Q9NR16 1453 aa27.24■■□□□ 1.95
SEC22A-208ENST00000487572 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
SEC22A-208ENST00000487572 MEX3CQ5U5Q3 659 aaKnown RBP27.23■■□□□ 1.95
SEC22A-208ENST00000487572 TERF2IPQ9NYB0 399 aa27.23■■□□□ 1.95
SEC22A-208ENST00000487572 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
SEC22A-208ENST00000487572 CABLES1Q8TDN4 633 aa27.22■■□□□ 1.95
SEC22A-208ENST00000487572 A0A1W2PP64 1363 aa27.22■■□□□ 1.95
SEC22A-208ENST00000487572 C11orf95C9JLR9 678 aaPredicted RBP27.2■■□□□ 1.94
SEC22A-208ENST00000487572 ADAMTS2O95450 1211 aa27.2■■□□□ 1.94
SEC22A-208ENST00000487572 HAP1P54257 671 aaPredicted RBP27.2■■□□□ 1.94
SEC22A-208ENST00000487572 ABTB2Q8N961 1025 aa27.2■■□□□ 1.94
SEC22A-208ENST00000487572 BRD4O60885 1362 aaPredicted RBP27.2■■□□□ 1.94
SEC22A-208ENST00000487572 SSH2Q76I76 1423 aa27.18■■□□□ 1.94
SEC22A-208ENST00000487572 MON2Q7Z3U7 1717 aa27.18■■□□□ 1.94
SEC22A-208ENST00000487572 TTC21BQ7Z4L5 1316 aa27.17■■□□□ 1.94
SEC22A-208ENST00000487572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.17■■□□□ 1.94
SEC22A-208ENST00000487572 MYOM1P52179 1685 aa27.17■■□□□ 1.94
SEC22A-208ENST00000487572 PHF23Q9BUL5 403 aaPredicted RBP27.16■■□□□ 1.94
SEC22A-208ENST00000487572 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
SEC22A-208ENST00000487572 ANKRD36BQ8N2N9 1353 aa27.15■■□□□ 1.94
SEC22A-208ENST00000487572 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
SEC22A-208ENST00000487572 EDC4Q6P2E9 1401 aaKnown RBP27.13■■□□□ 1.93
SEC22A-208ENST00000487572 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
SEC22A-208ENST00000487572 TTC21AQ8NDW8 1320 aa27.13■■□□□ 1.93
SEC22A-208ENST00000487572 ABCA3Q99758 1704 aa27.13■■□□□ 1.93
SEC22A-208ENST00000487572 PIK3C2AO00443 1686 aa27.11■■□□□ 1.93
SEC22A-208ENST00000487572 NLRP6P59044 892 aa27.11■■□□□ 1.93
SEC22A-208ENST00000487572 NLRP13Q86W25 1043 aa27.11■■□□□ 1.93
SEC22A-208ENST00000487572 NME9Q86XW9 330 aa27.09■■□□□ 1.93
SEC22A-208ENST00000487572 CRYBG1Q9Y4K1 1723 aa27.08■■□□□ 1.93
SEC22A-208ENST00000487572 NGLY1Q96IV0 654 aa27.07■■□□□ 1.92
SEC22A-208ENST00000487572 PHRF1Q9P1Y6 1649 aaKnown RBP27.06■■□□□ 1.92
SEC22A-208ENST00000487572 ZRANB1Q9UGI0 708 aa27.06■■□□□ 1.92
SEC22A-208ENST00000487572 USP19O94966 1318 aa27.06■■□□□ 1.92
SEC22A-208ENST00000487572 AFF2P51816 1311 aa27.04■■□□□ 1.92
SEC22A-208ENST00000487572 CCDC7Q96M83 1385 aa27.04■■□□□ 1.92
SEC22A-208ENST00000487572 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
SEC22A-208ENST00000487572 WASHC2AQ641Q2 1341 aa27.03■■□□□ 1.92
SEC22A-208ENST00000487572 CARD14Q9BXL6 1004 aa27.03■■□□□ 1.92
SEC22A-208ENST00000487572 NSD3Q9BZ95 1437 aa27.03■■□□□ 1.92
SEC22A-208ENST00000487572 SOX12O15370 315 aa27.02■■□□□ 1.92
SEC22A-208ENST00000487572 PANK3Q9H999 370 aa27.02■■□□□ 1.92
SEC22A-208ENST00000487572 ZC3H6P61129 1189 aaKnown RBP27.01■■□□□ 1.91
SEC22A-208ENST00000487572 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
SEC22A-208ENST00000487572 GCP02774 474 aa27■■□□□ 1.91
SEC22A-208ENST00000487572 SLIT3O75094 1523 aa27■■□□□ 1.91
SEC22A-208ENST00000487572 USP31Q70CQ4 1352 aa26.99■■□□□ 1.91
SEC22A-208ENST00000487572 PRDM11Q9NQV5 511 aa26.99■■□□□ 1.91
SEC22A-208ENST00000487572 KIAA0232Q92628 1395 aa26.98■■□□□ 1.91
SEC22A-208ENST00000487572 ZBTB7CA1YPR0 619 aa26.98■■□□□ 1.91
SEC22A-208ENST00000487572 FAM83GA6ND36 823 aa26.98■■□□□ 1.91
SEC22A-208ENST00000487572 ZNF772Q68DY9 489 aaPredicted RBP26.96■■□□□ 1.91
SEC22A-208ENST00000487572 GGNBP2Q9H3C7 697 aa26.96■■□□□ 1.91
SEC22A-208ENST00000487572 USP21Q9UK80 565 aa26.96■■□□□ 1.91
SEC22A-208ENST00000487572 FYB1O15117 783 aa26.95■■□□□ 1.9
SEC22A-208ENST00000487572 CHRNA2Q15822 529 aa26.95■■□□□ 1.9
SEC22A-208ENST00000487572 FNBP4Q8N3X1 1017 aaPredicted RBP26.95■■□□□ 1.9
SEC22A-208ENST00000487572 COG3Q96JB2 828 aa26.95■■□□□ 1.9
SEC22A-208ENST00000487572 OVOS2A0A0J9YW53 1432 aa26.95■■□□□ 1.9
SEC22A-208ENST00000487572 OVOS2Q6IE36 1432 aa26.95■■□□□ 1.9
SEC22A-208ENST00000487572 KCNH5Q8NCM2 988 aa26.94■■□□□ 1.9
SEC22A-208ENST00000487572 USP54Q70EL1 1684 aa26.94■■□□□ 1.9
SEC22A-208ENST00000487572 PLCH1Q4KWH8 1693 aa26.93■■□□□ 1.9
SEC22A-208ENST00000487572 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
SEC22A-208ENST00000487572 CGNL1Q0VF96 1302 aa26.92■■□□□ 1.9
SEC22A-208ENST00000487572 COL14A1Q05707 1796 aaKnown RBP26.92■■□□□ 1.9
SEC22A-208ENST00000487572 SLIT2O94813 1529 aa26.92■■□□□ 1.9
SEC22A-208ENST00000487572 POTEAQ6S8J7 498 aa26.92■■□□□ 1.9
SEC22A-208ENST00000487572 CPDO75976 1380 aa26.91■■□□□ 1.9
SEC22A-208ENST00000487572 BCL9LQ86UU0 1499 aa26.9■■□□□ 1.9
SEC22A-208ENST00000487572 BTG4Q9NY30 223 aa26.9■■□□□ 1.9
SEC22A-208ENST00000487572 NFAT5O94916 1531 aa26.9■■□□□ 1.9
SEC22A-208ENST00000487572 UNC5CLQ8IV45 518 aa26.88■■□□□ 1.89
SEC22A-208ENST00000487572 QTRT2Q9H974 415 aaKnown RBP26.88■■□□□ 1.89
SEC22A-208ENST00000487572 KNSTRNQ9Y448 316 aa26.88■■□□□ 1.89
SEC22A-208ENST00000487572 NWD2Q9ULI1 1742 aa26.85■■□□□ 1.89
SEC22A-208ENST00000487572 ARHGEF25Q86VW2 580 aa26.85■■□□□ 1.89
SEC22A-208ENST00000487572 TRPC5Q9UL62 973 aaPredicted RBP26.85■■□□□ 1.89
SEC22A-208ENST00000487572 FBLN1P23142 703 aa26.84■■□□□ 1.89
SEC22A-208ENST00000487572 ATRNO75882 1429 aa26.82■■□□□ 1.88
SEC22A-208ENST00000487572 NRAPQ86VF7 1730 aa26.82■■□□□ 1.88
SEC22A-208ENST00000487572 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.82■■□□□ 1.88
SEC22A-208ENST00000487572 STRN4Q9NRL3 753 aa26.82■■□□□ 1.88
SEC22A-208ENST00000487572 CCDC9Q9Y3X0 531 aaKnown RBP26.82■■□□□ 1.88
SEC22A-208ENST00000487572 LMO7Q8WWI1 1683 aa26.82■■□□□ 1.88
SEC22A-208ENST00000487572 AATKQ6ZMQ8 1374 aa26.82■■□□□ 1.88
SEC22A-208ENST00000487572 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
SEC22A-208ENST00000487572 EVA1CP58658 441 aa26.8■■□□□ 1.88
SEC22A-208ENST00000487572 RXRBP28702 533 aa26.79■■□□□ 1.88
SEC22A-208ENST00000487572 LTN1O94822 1766 aa26.79■■□□□ 1.88
SEC22A-208ENST00000487572 PER1O15534 1290 aaPredicted RBP26.78■■□□□ 1.88
SEC22A-208ENST00000487572 VPS72Q15906 364 aa26.78■■□□□ 1.88
SEC22A-208ENST00000487572 NSD2O96028 1365 aa26.78■■□□□ 1.88
SEC22A-208ENST00000487572 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SEC22A-208ENST00000487572 TNNT2P45379 298 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms