RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	CCDC61	Q9Y6R9	512 aa		33.92	■■■■□ 3.02
PLOD3-215	ENST00000487563	FAM83G	A6ND36	823 aa		33.91	■■■■□ 3.02
PLOD3-215	ENST00000487563	SRPK2	P78362	688 aa	Known RBP	33.9	■■■■□ 3.02
PLOD3-215	ENST00000487563	QRICH2	Q9H0J4	1663 aa		33.89	■■■■□ 3.02
PLOD3-215	ENST00000487563	ACE	P12821	1306 aa		33.88	■■■■□ 3.01
PLOD3-215	ENST00000487563	POLR3A	O14802	1390 aa	Predicted RBP	33.87	■■■■□ 3.01
PLOD3-215	ENST00000487563	COL14A1	Q05707	1796 aa	Known RBP	33.87	■■■■□ 3.01
PLOD3-215	ENST00000487563	TRPM1	Q7Z4N2	1603 aa		33.86	■■■■□ 3.01
PLOD3-215	ENST00000487563	CRYBG1	Q9Y4K1	1723 aa		33.86	■■■■□ 3.01
PLOD3-215	ENST00000487563	BTG4	Q9NY30	223 aa		33.85	■■■■□ 3.01
PLOD3-215	ENST00000487563	PLEKHG3	A1L390	1219 aa		33.84	■■■■□ 3.01
PLOD3-215	ENST00000487563	NBPF8	Q3BBV2	869 aa		33.84	■■■■□ 3.01
PLOD3-215	ENST00000487563	NRAP	Q86VF7	1730 aa		33.83	■■■■□ 3.01
PLOD3-215	ENST00000487563	PRDM11	Q9NQV5	511 aa		33.83	■■■■□ 3.01
PLOD3-215	ENST00000487563	PPIP5K1	Q6PFW1	1433 aa		33.82	■■■■□ 3
PLOD3-215	ENST00000487563	ROCK2	O75116	1388 aa	Known RBP	33.82	■■■■□ 3
PLOD3-215	ENST00000487563	SEPT12	Q8IYM1	358 aa		33.81	■■■■□ 3
PLOD3-215	ENST00000487563	CABP2	Q9NPB3	220 aa		33.81	■■■■□ 3
PLOD3-215	ENST00000487563		A0A0G2JS52	829 aa		33.8	■■■■□ 3
PLOD3-215	ENST00000487563	MYT1	Q01538	1121 aa		33.8	■■■■□ 3
PLOD3-215	ENST00000487563	NUTM2G	Q5VZR2	741 aa		33.8	■■■■□ 3
PLOD3-215	ENST00000487563	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.79	■■■■□ 3
PLOD3-215	ENST00000487563	BRWD3	Q6RI45	1802 aa		33.77	■■■■□ 3
PLOD3-215	ENST00000487563	CCDC125	Q86Z20	511 aa		33.77	■■■■□ 3
PLOD3-215	ENST00000487563	KIAA0232	Q92628	1395 aa		33.75	■■■□□ 2.99
PLOD3-215	ENST00000487563	ABTB2	Q8N961	1025 aa		33.75	■■■□□ 2.99
PLOD3-215	ENST00000487563	EVC2	Q86UK5	1308 aa		33.74	■■■□□ 2.99
PLOD3-215	ENST00000487563	EP400	Q96L91	3159 aa		33.73	■■■□□ 2.99
PLOD3-215	ENST00000487563	ONECUT3	O60422	494 aa	Predicted RBP	33.72	■■■□□ 2.99
PLOD3-215	ENST00000487563	ZC3H6	P61129	1189 aa	Known RBP	33.71	■■■□□ 2.99
PLOD3-215	ENST00000487563	FAM98C	Q17RN3	349 aa	Known RBP	33.71	■■■□□ 2.99
PLOD3-215	ENST00000487563	CHRNA2	Q15822	529 aa		33.7	■■■□□ 2.99
PLOD3-215	ENST00000487563	KRT27	Q7Z3Y8	459 aa		33.7	■■■□□ 2.99
PLOD3-215	ENST00000487563	BLM	P54132	1417 aa	Predicted RBP	33.69	■■■□□ 2.98
PLOD3-215	ENST00000487563	CABP1	Q9NZU7	370 aa		33.68	■■■□□ 2.98
PLOD3-215	ENST00000487563	SPATA31A5	Q5VU36	1347 aa		33.67	■■■□□ 2.98
PLOD3-215	ENST00000487563	SPATA31A7	Q8IWB4	1347 aa		33.67	■■■□□ 2.98
PLOD3-215	ENST00000487563	BRD4	O60885	1362 aa	Predicted RBP	33.67	■■■□□ 2.98
PLOD3-215	ENST00000487563	TONSL	Q96HA7	1378 aa		33.67	■■■□□ 2.98
PLOD3-215	ENST00000487563	NRK	Q7Z2Y5	1582 aa		33.67	■■■□□ 2.98
PLOD3-215	ENST00000487563	NLRP13	Q86W25	1043 aa		33.66	■■■□□ 2.98
PLOD3-215	ENST00000487563	STRN4	Q9NRL3	753 aa		33.65	■■■□□ 2.98
PLOD3-215	ENST00000487563	USP6	P35125	1406 aa		33.64	■■■□□ 2.98
PLOD3-215	ENST00000487563	SF3B2	Q13435	895 aa	Known RBP	33.64	■■■□□ 2.98
PLOD3-215	ENST00000487563	USP19	O94966	1318 aa		33.63	■■■□□ 2.97
PLOD3-215	ENST00000487563	TRIM26	Q12899	539 aa	Predicted RBP	33.62	■■■□□ 2.97
PLOD3-215	ENST00000487563	EVA1C	P58658	441 aa		33.59	■■■□□ 2.97
PLOD3-215	ENST00000487563	CARD11	Q9BXL7	1154 aa		33.59	■■■□□ 2.97
PLOD3-215	ENST00000487563	ZRANB1	Q9UGI0	708 aa		33.58	■■■□□ 2.97
PLOD3-215	ENST00000487563	CPD	O75976	1380 aa		33.58	■■■□□ 2.97
PLOD3-215	ENST00000487563	SPATA31A1	Q5TZJ5	1347 aa		33.57	■■■□□ 2.97
PLOD3-215	ENST00000487563	GC	P02774	474 aa		33.56	■■■□□ 2.96
PLOD3-215	ENST00000487563	NLRP6	P59044	892 aa		33.56	■■■□□ 2.96
PLOD3-215	ENST00000487563	THSD7A	Q9UPZ6	1657 aa		33.55	■■■□□ 2.96
PLOD3-215	ENST00000487563	SSH2	Q76I76	1423 aa		33.54	■■■□□ 2.96
PLOD3-215	ENST00000487563	ZBTB7C	A1YPR0	619 aa		33.52	■■■□□ 2.96
PLOD3-215	ENST00000487563	DEFB132	Q7Z7B7	95 aa		33.52	■■■□□ 2.96
PLOD3-215	ENST00000487563	USP35	Q9P2H5	1018 aa		33.52	■■■□□ 2.96
PLOD3-215	ENST00000487563	LMO7	Q8WWI1	1683 aa		33.52	■■■□□ 2.96
PLOD3-215	ENST00000487563	CAMTA1	Q9Y6Y1	1673 aa		33.52	■■■□□ 2.96
PLOD3-215	ENST00000487563	ZNF692	Q9BU19	519 aa	Predicted RBP	33.51	■■■□□ 2.95
PLOD3-215	ENST00000487563	SBNO2	Q9Y2G9	1366 aa		33.5	■■■□□ 2.95
PLOD3-215	ENST00000487563	PIK3C2A	O00443	1686 aa		33.49	■■■□□ 2.95
PLOD3-215	ENST00000487563	SLIT3	O75094	1523 aa		33.48	■■■□□ 2.95
PLOD3-215	ENST00000487563	AKAP12	Q02952	1782 aa		33.48	■■■□□ 2.95
PLOD3-215	ENST00000487563	FAM182B	Q5T319	152 aa		33.47	■■■□□ 2.95
PLOD3-215	ENST00000487563	LARP1	Q6PKG0	1096 aa	Known RBP	33.47	■■■□□ 2.95
PLOD3-215	ENST00000487563	TTC21B	Q7Z4L5	1316 aa		33.46	■■■□□ 2.95
PLOD3-215	ENST00000487563	BAG6	P46379	1132 aa		33.45	■■■□□ 2.95
PLOD3-215	ENST00000487563	KTN1	Q86UP2	1357 aa	Known RBP	33.44	■■■□□ 2.94
PLOD3-215	ENST00000487563	TTC21A	Q8NDW8	1320 aa		33.43	■■■□□ 2.94
PLOD3-215	ENST00000487563	COL5A2	P05997	1499 aa	Predicted RBP	33.43	■■■□□ 2.94
PLOD3-215	ENST00000487563	BARGIN	Q6ZT62	677 aa		33.42	■■■□□ 2.94
PLOD3-215	ENST00000487563	TCP11L2	Q8N4U5	519 aa		33.42	■■■□□ 2.94
PLOD3-215	ENST00000487563	CPSF1	Q10570	1443 aa	Known RBP	33.42	■■■□□ 2.94
PLOD3-215	ENST00000487563	RGPD1	P0DJD0	1748 aa		33.42	■■■□□ 2.94
PLOD3-215	ENST00000487563	AATK	Q6ZMQ8	1374 aa		33.4	■■■□□ 2.94
PLOD3-215	ENST00000487563	MON2	Q7Z3U7	1717 aa		33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	SOX12	O15370	315 aa		33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	PDE3B	Q13370	1112 aa		33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	KCNH5	Q8NCM2	988 aa		33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	TMC1	Q8TDI8	760 aa		33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	THRAP3	Q9Y2W1	955 aa	Known RBP	33.37	■■■□□ 2.93
PLOD3-215	ENST00000487563	CRB1	P82279	1406 aa		33.36	■■■□□ 2.93
PLOD3-215	ENST00000487563	FAM196A	Q6ZSG2	479 aa		33.35	■■■□□ 2.93
PLOD3-215	ENST00000487563	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.32	■■■□□ 2.92
PLOD3-215	ENST00000487563	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.32	■■■□□ 2.92
PLOD3-215	ENST00000487563	TNS1	Q9HBL0	1735 aa	Known RBP	33.31	■■■□□ 2.92
PLOD3-215	ENST00000487563	EN1	Q05925	392 aa	Predicted RBP	33.3	■■■□□ 2.92
PLOD3-215	ENST00000487563	TOM1L2	Q6ZVM7	507 aa		33.3	■■■□□ 2.92
PLOD3-215	ENST00000487563	COL18A1	P39060	1754 aa		33.29	■■■□□ 2.92
PLOD3-215	ENST00000487563	TRIM37	O94972	964 aa		33.29	■■■□□ 2.92
PLOD3-215	ENST00000487563	ARHGEF25	Q86VW2	580 aa		33.29	■■■□□ 2.92
PLOD3-215	ENST00000487563	CD163L1	Q9NR16	1453 aa		33.28	■■■□□ 2.92
PLOD3-215	ENST00000487563	SLC12A5	Q9H2X9	1139 aa		33.27	■■■□□ 2.92
PLOD3-215	ENST00000487563	PARP4	Q9UKK3	1724 aa	Known RBP	33.27	■■■□□ 2.92
PLOD3-215	ENST00000487563	TERF2IP	Q9NYB0	399 aa		33.26	■■■□□ 2.91
PLOD3-215	ENST00000487563	NFAT5	O94916	1531 aa		33.26	■■■□□ 2.91
PLOD3-215	ENST00000487563	DISP2	A7MBM2	1401 aa		33.26	■■■□□ 2.91
PLOD3-215	ENST00000487563	WDR17	Q8IZU2	1322 aa		33.26	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms