RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 MYT1Q01538 1121 aa15.09■□□□□ 0.01
TOP3B-216ENST00000487485 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
TOP3B-216ENST00000487485 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
TOP3B-216ENST00000487485 LRP5O75197 1615 aa15.08■□□□□ 0
TOP3B-216ENST00000487485 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0
TOP3B-216ENST00000487485 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
TOP3B-216ENST00000487485 SBNO1A3KN83 1393 aa15.08■□□□□ 0
TOP3B-216ENST00000487485 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0
TOP3B-216ENST00000487485 EN1Q05925 392 aaPredicted RBP15.07■□□□□ 0
TOP3B-216ENST00000487485 FAM182BQ5T319 152 aa15.07■□□□□ 0
TOP3B-216ENST00000487485 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
TOP3B-216ENST00000487485 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
TOP3B-216ENST00000487485 PLCH1Q4KWH8 1693 aa15.06■□□□□ 0
TOP3B-216ENST00000487485 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
TOP3B-216ENST00000487485 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
TOP3B-216ENST00000487485 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
TOP3B-216ENST00000487485 BTG4Q9NY30 223 aa15.05■□□□□ -0
TOP3B-216ENST00000487485 ARHGEF10O15013 1369 aa15.05■□□□□ -0
TOP3B-216ENST00000487485 USP47Q96K76 1375 aa15.04■□□□□ -0
TOP3B-216ENST00000487485 ST20-MTHFSA0A0A6YYL1 179 aa15.04■□□□□ -0
TOP3B-216ENST00000487485 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
TOP3B-216ENST00000487485 ADGRB2O60241 1585 aa15.03■□□□□ -0
TOP3B-216ENST00000487485 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
TOP3B-216ENST00000487485 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
TOP3B-216ENST00000487485 EIF4G2P78344 907 aaKnown RBP eCLIP15.01□□□□□ -0.01
TOP3B-216ENST00000487485 SPATA31A5Q5VU36 1347 aa15□□□□□ -0.01
TOP3B-216ENST00000487485 SPATA31A7Q8IWB4 1347 aa15□□□□□ -0.01
TOP3B-216ENST00000487485 EZH2Q15910 746 aaKnown RBP15□□□□□ -0.01
TOP3B-216ENST00000487485 CDK19Q9BWU1 502 aa15□□□□□ -0.01
TOP3B-216ENST00000487485 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
TOP3B-216ENST00000487485 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
TOP3B-216ENST00000487485 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
TOP3B-216ENST00000487485 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
TOP3B-216ENST00000487485 TESK2Q96S53 571 aa14.98□□□□□ -0.01
TOP3B-216ENST00000487485 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
TOP3B-216ENST00000487485 SLC24A1O60721 1099 aa14.97□□□□□ -0.01
TOP3B-216ENST00000487485 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
TOP3B-216ENST00000487485 CAMKK2Q96RR4 588 aa14.97□□□□□ -0.01
TOP3B-216ENST00000487485 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
TOP3B-216ENST00000487485 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
TOP3B-216ENST00000487485 TRIM37O94972 964 aa14.96□□□□□ -0.01
TOP3B-216ENST00000487485 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
TOP3B-216ENST00000487485 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
TOP3B-216ENST00000487485 COL14A1Q05707 1796 aaKnown RBP14.95□□□□□ -0.02
TOP3B-216ENST00000487485 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
TOP3B-216ENST00000487485 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
TOP3B-216ENST00000487485 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
TOP3B-216ENST00000487485 DISP2A7MBM2 1401 aa14.94□□□□□ -0.02
TOP3B-216ENST00000487485 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-216ENST00000487485 PRDM11Q9NQV5 511 aa14.94□□□□□ -0.02
TOP3B-216ENST00000487485 APBA3O96018 575 aa14.93□□□□□ -0.02
TOP3B-216ENST00000487485 TMF1P82094 1093 aa14.93□□□□□ -0.02
TOP3B-216ENST00000487485 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
TOP3B-216ENST00000487485 FAM196AQ6ZSG2 479 aa14.93□□□□□ -0.02
TOP3B-216ENST00000487485 ALS2Q96Q42 1657 aa14.93□□□□□ -0.02
TOP3B-216ENST00000487485 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
TOP3B-216ENST00000487485 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
TOP3B-216ENST00000487485 STRN4Q9NRL3 753 aa14.92□□□□□ -0.02
TOP3B-216ENST00000487485 ATP7BP35670 1465 aa14.92□□□□□ -0.02
TOP3B-216ENST00000487485 THSD7AQ9UPZ6 1657 aa14.91□□□□□ -0.02
TOP3B-216ENST00000487485 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
TOP3B-216ENST00000487485 TNS1Q9HBL0 1735 aaKnown RBP14.91□□□□□ -0.02
TOP3B-216ENST00000487485 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
TOP3B-216ENST00000487485 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
TOP3B-216ENST00000487485 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
TOP3B-216ENST00000487485 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
TOP3B-216ENST00000487485 CDCA8Q53HL2 280 aa14.89□□□□□ -0.03
TOP3B-216ENST00000487485 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
TOP3B-216ENST00000487485 YY1P25490 414 aa14.88□□□□□ -0.03
TOP3B-216ENST00000487485 NUTM2GQ5VZR2 741 aa14.88□□□□□ -0.03
TOP3B-216ENST00000487485 CABP1Q9NZU7 370 aa14.88□□□□□ -0.03
TOP3B-216ENST00000487485 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
TOP3B-216ENST00000487485 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
TOP3B-216ENST00000487485 CRYBG1Q9Y4K1 1723 aa14.86□□□□□ -0.03
TOP3B-216ENST00000487485 EVA1CP58658 441 aa14.86□□□□□ -0.03
TOP3B-216ENST00000487485 PDE3BQ13370 1112 aa14.86□□□□□ -0.03
TOP3B-216ENST00000487485 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
TOP3B-216ENST00000487485 ACEP12821 1306 aa14.86□□□□□ -0.03
TOP3B-216ENST00000487485 PARD3Q8TEW0 1356 aa14.85□□□□□ -0.03
TOP3B-216ENST00000487485 C11orf95C9JLR9 678 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-216ENST00000487485 NBPF14Q5TI25 921 aa14.85□□□□□ -0.03
TOP3B-216ENST00000487485 BARGINQ6ZT62 677 aa14.85□□□□□ -0.03
TOP3B-216ENST00000487485 LARP1Q6PKG0 1096 aaKnown RBP14.84□□□□□ -0.03
TOP3B-216ENST00000487485 POLR3GLQ9BT43 218 aa14.84□□□□□ -0.03
TOP3B-216ENST00000487485 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
TOP3B-216ENST00000487485 AKAP12Q02952 1782 aa14.83□□□□□ -0.03
TOP3B-216ENST00000487485 POLR3AO14802 1390 aaPredicted RBP14.83□□□□□ -0.04
TOP3B-216ENST00000487485 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
TOP3B-216ENST00000487485 SSH2Q76I76 1423 aa14.82□□□□□ -0.04
TOP3B-216ENST00000487485 MYOM1P52179 1685 aa14.81□□□□□ -0.04
TOP3B-216ENST00000487485 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
TOP3B-216ENST00000487485 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
TOP3B-216ENST00000487485 PPP1R1BQ9UD71 204 aaPredicted RBP14.81□□□□□ -0.04
TOP3B-216ENST00000487485 KCNQ2O43526 872 aa14.8□□□□□ -0.04
TOP3B-216ENST00000487485 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
TOP3B-216ENST00000487485 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
TOP3B-216ENST00000487485 CAMTA1Q9Y6Y1 1673 aa14.8□□□□□ -0.04
TOP3B-216ENST00000487485 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
TOP3B-216ENST00000487485 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-216ENST00000487485 RREB1Q92766 1687 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms