RNA–Protein interactions for RNA: ENST00000487411.5

STX4-210, Transcript of syntaxin 4, humanhuman

TSL 1 (best)

Gene STX4, Length 1,290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX4-210ENST00000487411 TIMELESSQ9UNS1 1208 aa32.08■■■□□ 2.73
STX4-210ENST00000487411 CDK12Q9NYV4 1490 aaPredicted RBP32.08■■■□□ 2.73
STX4-210ENST00000487411 SLIT2O94813 1529 aa32.05■■■□□ 2.72
STX4-210ENST00000487411 BCL9LQ86UU0 1499 aa32.05■■■□□ 2.72
STX4-210ENST00000487411 CRYBG1Q9Y4K1 1723 aa32.04■■■□□ 2.72
STX4-210ENST00000487411 ATRNO75882 1429 aa32.04■■■□□ 2.72
STX4-210ENST00000487411 PLEKHG5O94827 1062 aa32.04■■■□□ 2.72
STX4-210ENST00000487411 RBM6P78332 1123 aaKnown RBP32.03■■■□□ 2.72
STX4-210ENST00000487411 CABP1Q9NZU7 370 aa32.03■■■□□ 2.72
STX4-210ENST00000487411 TRPC5Q9UL62 973 aaPredicted RBP32.03■■■□□ 2.72
STX4-210ENST00000487411 ATAD2Q6PL18 1390 aa32.03■■■□□ 2.72
STX4-210ENST00000487411 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.01■■■□□ 2.72
STX4-210ENST00000487411 BRD4O60885 1362 aaPredicted RBP32.01■■■□□ 2.71
STX4-210ENST00000487411 USP6P35125 1406 aa31.99■■■□□ 2.71
STX4-210ENST00000487411 CCER1Q8TC90 406 aaPredicted RBP31.97■■■□□ 2.71
STX4-210ENST00000487411 PLCH1Q4KWH8 1693 aa31.96■■■□□ 2.71
STX4-210ENST00000487411 RGS12O14924 1447 aa31.96■■■□□ 2.71
STX4-210ENST00000487411 UNC5CLQ8IV45 518 aa31.95■■■□□ 2.71
STX4-210ENST00000487411 PHRF1Q9P1Y6 1649 aaKnown RBP31.95■■■□□ 2.71
STX4-210ENST00000487411 NWD2Q9ULI1 1742 aa31.95■■■□□ 2.7
STX4-210ENST00000487411 SSH2Q76I76 1423 aa31.92■■■□□ 2.7
STX4-210ENST00000487411 TESK2Q96S53 571 aa31.92■■■□□ 2.7
STX4-210ENST00000487411 ST20-MTHFSA0A0A6YYL1 179 aa31.91■■■□□ 2.7
STX4-210ENST00000487411 FAM83GA6ND36 823 aa31.91■■■□□ 2.7
STX4-210ENST00000487411 NUTM2GQ5VZR2 741 aa31.91■■■□□ 2.7
STX4-210ENST00000487411 ABTB2Q8N961 1025 aa31.91■■■□□ 2.7
STX4-210ENST00000487411 AKAP12Q02952 1782 aa31.9■■■□□ 2.7
STX4-210ENST00000487411 COL14A1Q05707 1796 aaKnown RBP31.9■■■□□ 2.7
STX4-210ENST00000487411 USP19O94966 1318 aa31.9■■■□□ 2.7
STX4-210ENST00000487411 USP47Q96K76 1375 aa31.9■■■□□ 2.7
STX4-210ENST00000487411 ZNF692Q9BU19 519 aaPredicted RBP31.89■■■□□ 2.7
STX4-210ENST00000487411 CPSF1Q10570 1443 aaKnown RBP31.89■■■□□ 2.7
STX4-210ENST00000487411 PUS7Q96PZ0 661 aaKnown RBP31.88■■■□□ 2.69
STX4-210ENST00000487411 NRKQ7Z2Y5 1582 aa31.87■■■□□ 2.69
STX4-210ENST00000487411 GJD4Q96KN9 370 aaPredicted RBP31.87■■■□□ 2.69
STX4-210ENST00000487411 SLC24A1O60721 1099 aa31.86■■■□□ 2.69
STX4-210ENST00000487411 NRAPQ86VF7 1730 aa31.86■■■□□ 2.69
STX4-210ENST00000487411 NLRP13Q86W25 1043 aa31.85■■■□□ 2.69
STX4-210ENST00000487411 GLI3P10071 1580 aa31.85■■■□□ 2.69
STX4-210ENST00000487411 KIAA0232Q92628 1395 aa31.84■■■□□ 2.69
STX4-210ENST00000487411 PRDM11Q9NQV5 511 aa31.84■■■□□ 2.69
STX4-210ENST00000487411 VPS72Q15906 364 aa31.83■■■□□ 2.69
STX4-210ENST00000487411 PIK3C2AO00443 1686 aa31.83■■■□□ 2.69
STX4-210ENST00000487411 CD163L1Q9NR16 1453 aa31.82■■■□□ 2.68
STX4-210ENST00000487411 KTN1Q86UP2 1357 aaKnown RBP31.81■■■□□ 2.68
STX4-210ENST00000487411 TTC21BQ7Z4L5 1316 aa31.81■■■□□ 2.68
STX4-210ENST00000487411 MON2Q7Z3U7 1717 aa31.81■■■□□ 2.68
STX4-210ENST00000487411 BTG4Q9NY30 223 aa31.81■■■□□ 2.68
STX4-210ENST00000487411 TTC21AQ8NDW8 1320 aa31.79■■■□□ 2.68
STX4-210ENST00000487411 SLIT3O75094 1523 aa31.79■■■□□ 2.68
STX4-210ENST00000487411 CPDO75976 1380 aa31.79■■■□□ 2.68
STX4-210ENST00000487411 NLRP6P59044 892 aa31.78■■■□□ 2.68
STX4-210ENST00000487411 ZC3H6P61129 1189 aaKnown RBP31.78■■■□□ 2.68
STX4-210ENST00000487411 TMC1Q8TDI8 760 aa31.77■■■□□ 2.68
STX4-210ENST00000487411 NINLQ9Y2I6 1382 aa31.77■■■□□ 2.68
STX4-210ENST00000487411 GCP02774 474 aa31.76■■■□□ 2.67
STX4-210ENST00000487411 SLC12A5Q9H2X9 1139 aa31.76■■■□□ 2.67
STX4-210ENST00000487411 CHRNA2Q15822 529 aa31.75■■■□□ 2.67
STX4-210ENST00000487411 TMF1P82094 1093 aa31.74■■■□□ 2.67
STX4-210ENST00000487411 HDGFL2Q7Z4V5 671 aaPredicted RBP31.74■■■□□ 2.67
STX4-210ENST00000487411 CCDC9Q9Y3X0 531 aaKnown RBP31.73■■■□□ 2.67
STX4-210ENST00000487411 A0A1W2PP64 1363 aa31.72■■■□□ 2.67
STX4-210ENST00000487411 LMO7Q8WWI1 1683 aa31.71■■■□□ 2.67
STX4-210ENST00000487411 UPF1Q92900 1129 aaKnown RBP eCLIP31.71■■■□□ 2.67
STX4-210ENST00000487411 TERF2IPQ9NYB0 399 aa31.71■■■□□ 2.67
STX4-210ENST00000487411 EDC4Q6P2E9 1401 aaKnown RBP31.7■■■□□ 2.67
STX4-210ENST00000487411 ONECUT3O60422 494 aaPredicted RBP31.67■■■□□ 2.66
STX4-210ENST00000487411 SPATA31A5Q5VU36 1347 aa31.67■■■□□ 2.66
STX4-210ENST00000487411 SPATA31A7Q8IWB4 1347 aa31.67■■■□□ 2.66
STX4-210ENST00000487411 USP54Q70EL1 1684 aa31.67■■■□□ 2.66
STX4-210ENST00000487411 CAMTA1Q9Y6Y1 1673 aa31.67■■■□□ 2.66
STX4-210ENST00000487411 USP31Q70CQ4 1352 aa31.66■■■□□ 2.66
STX4-210ENST00000487411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.65■■■□□ 2.66
STX4-210ENST00000487411 CDCA8Q53HL2 280 aa31.64■■■□□ 2.66
STX4-210ENST00000487411 SEPT12Q8IYM1 358 aa31.63■■■□□ 2.65
STX4-210ENST00000487411 KCNH5Q8NCM2 988 aa31.63■■■□□ 2.65
STX4-210ENST00000487411 NFAT5O94916 1531 aa31.62■■■□□ 2.65
STX4-210ENST00000487411 AATKQ6ZMQ8 1374 aa31.62■■■□□ 2.65
STX4-210ENST00000487411 ANKRD36BQ8N2N9 1353 aa31.62■■■□□ 2.65
STX4-210ENST00000487411 STRN4Q9NRL3 753 aa31.62■■■□□ 2.65
STX4-210ENST00000487411 NME9Q86XW9 330 aa31.61■■■□□ 2.65
STX4-210ENST00000487411 SPATA31A1Q5TZJ5 1347 aa31.6■■■□□ 2.65
STX4-210ENST00000487411 COL5A2P05997 1499 aaPredicted RBP31.59■■■□□ 2.65
STX4-210ENST00000487411 FAM98CQ17RN3 349 aaKnown RBP31.59■■■□□ 2.65
STX4-210ENST00000487411 ZRANB1Q9UGI0 708 aa31.58■■■□□ 2.65
STX4-210ENST00000487411 BRWD3Q6RI45 1802 aa31.58■■■□□ 2.65
STX4-210ENST00000487411 EVA1CP58658 441 aa31.57■■■□□ 2.64
STX4-210ENST00000487411 ARHGEF25Q86VW2 580 aa31.57■■■□□ 2.64
STX4-210ENST00000487411 COL18A1P39060 1754 aa31.56■■■□□ 2.64
STX4-210ENST00000487411 ZBTB7CA1YPR0 619 aa31.56■■■□□ 2.64
STX4-210ENST00000487411 THSD7AQ9UPZ6 1657 aa31.56■■■□□ 2.64
STX4-210ENST00000487411 OVOS2A0A0J9YW53 1432 aa31.56■■■□□ 2.64
STX4-210ENST00000487411 OVOS2Q6IE36 1432 aa31.56■■■□□ 2.64
STX4-210ENST00000487411 EIF4G2P78344 907 aaKnown RBP eCLIP31.55■■■□□ 2.64
STX4-210ENST00000487411 SOX12O15370 315 aa31.54■■■□□ 2.64
STX4-210ENST00000487411 LARP1Q6PKG0 1096 aaKnown RBP31.54■■■□□ 2.64
STX4-210ENST00000487411 A0A0G2JS52 829 aa31.53■■■□□ 2.64
STX4-210ENST00000487411 MYT1Q01538 1121 aa31.53■■■□□ 2.64
STX4-210ENST00000487411 MYOM1P52179 1685 aa31.53■■■□□ 2.64
STX4-210ENST00000487411 ABCC6O95255 1503 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms