RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 NUTM2GQ5VZR2 741 aa17.85■□□□□ 0.45
SREBF1-215ENST00000487401 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
SREBF1-215ENST00000487401 POLR3AO14802 1390 aaPredicted RBP17.83■□□□□ 0.45
SREBF1-215ENST00000487401 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
SREBF1-215ENST00000487401 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
SREBF1-215ENST00000487401 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
SREBF1-215ENST00000487401 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-215ENST00000487401 ZC3H6P61129 1189 aaKnown RBP17.81■□□□□ 0.44
SREBF1-215ENST00000487401 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
SREBF1-215ENST00000487401 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
SREBF1-215ENST00000487401 CABP1Q9NZU7 370 aa17.8■□□□□ 0.44
SREBF1-215ENST00000487401 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
SREBF1-215ENST00000487401 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
SREBF1-215ENST00000487401 GLI3P10071 1580 aa17.79■□□□□ 0.44
SREBF1-215ENST00000487401 EVC2Q86UK5 1308 aa17.79■□□□□ 0.44
SREBF1-215ENST00000487401 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
SREBF1-215ENST00000487401 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
SREBF1-215ENST00000487401 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
SREBF1-215ENST00000487401 EVA1CP58658 441 aa17.78■□□□□ 0.44
SREBF1-215ENST00000487401 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
SREBF1-215ENST00000487401 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
SREBF1-215ENST00000487401 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
SREBF1-215ENST00000487401 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
SREBF1-215ENST00000487401 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.44
SREBF1-215ENST00000487401 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.44
SREBF1-215ENST00000487401 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-215ENST00000487401 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-215ENST00000487401 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
SREBF1-215ENST00000487401 GCP02774 474 aa17.74■□□□□ 0.43
SREBF1-215ENST00000487401 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-215ENST00000487401 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
SREBF1-215ENST00000487401 NLRP6P59044 892 aa17.73■□□□□ 0.43
SREBF1-215ENST00000487401 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
SREBF1-215ENST00000487401 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
SREBF1-215ENST00000487401 USP19O94966 1318 aa17.72■□□□□ 0.43
SREBF1-215ENST00000487401 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
SREBF1-215ENST00000487401 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-215ENST00000487401 CARD11Q9BXL7 1154 aa17.71■□□□□ 0.43
SREBF1-215ENST00000487401 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
SREBF1-215ENST00000487401 NWD2Q9ULI1 1742 aa17.71■□□□□ 0.43
SREBF1-215ENST00000487401 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
SREBF1-215ENST00000487401 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
SREBF1-215ENST00000487401 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-215ENST00000487401 PLCH1Q4KWH8 1693 aa17.7■□□□□ 0.42
SREBF1-215ENST00000487401 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
SREBF1-215ENST00000487401 CPDO75976 1380 aa17.69■□□□□ 0.42
SREBF1-215ENST00000487401 BAG6P46379 1132 aa17.69■□□□□ 0.42
SREBF1-215ENST00000487401 EP400Q96L91 3159 aa17.69■□□□□ 0.42
SREBF1-215ENST00000487401 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
SREBF1-215ENST00000487401 USP6P35125 1406 aa17.68■□□□□ 0.42
SREBF1-215ENST00000487401 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
SREBF1-215ENST00000487401 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
SREBF1-215ENST00000487401 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
SREBF1-215ENST00000487401 BARGINQ6ZT62 677 aa17.66■□□□□ 0.42
SREBF1-215ENST00000487401 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
SREBF1-215ENST00000487401 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
SREBF1-215ENST00000487401 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
SREBF1-215ENST00000487401 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.42
SREBF1-215ENST00000487401 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
SREBF1-215ENST00000487401 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
SREBF1-215ENST00000487401 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
SREBF1-215ENST00000487401 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SREBF1-215ENST00000487401 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
SREBF1-215ENST00000487401 TRPM1Q7Z4N2 1603 aa17.62■□□□□ 0.41
SREBF1-215ENST00000487401 SOX12O15370 315 aa17.62■□□□□ 0.41
SREBF1-215ENST00000487401 EN1Q05925 392 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-215ENST00000487401 TTC21AQ8NDW8 1320 aa17.62■□□□□ 0.41
SREBF1-215ENST00000487401 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
SREBF1-215ENST00000487401 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
SREBF1-215ENST00000487401 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
SREBF1-215ENST00000487401 CAMTA1Q9Y6Y1 1673 aa17.61■□□□□ 0.41
SREBF1-215ENST00000487401 TRIM37O94972 964 aa17.6■□□□□ 0.41
SREBF1-215ENST00000487401 SBNO2Q9Y2G9 1366 aa17.6■□□□□ 0.41
SREBF1-215ENST00000487401 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
SREBF1-215ENST00000487401 HDGFL2Q7Z4V5 671 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-215ENST00000487401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
SREBF1-215ENST00000487401 CRYBG1Q9Y4K1 1723 aa17.58■□□□□ 0.41
SREBF1-215ENST00000487401 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.41
SREBF1-215ENST00000487401 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.41
SREBF1-215ENST00000487401 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
SREBF1-215ENST00000487401 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.4
SREBF1-215ENST00000487401 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
SREBF1-215ENST00000487401 APBA3O96018 575 aa17.57■□□□□ 0.4
SREBF1-215ENST00000487401 CSB-PGBD3P0DP91 1061 aa17.57■□□□□ 0.4
SREBF1-215ENST00000487401 SLC12A5Q9H2X9 1139 aa17.57■□□□□ 0.4
SREBF1-215ENST00000487401 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
SREBF1-215ENST00000487401 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-215ENST00000487401 CRB1P82279 1406 aa17.56■□□□□ 0.4
SREBF1-215ENST00000487401 TERF2IPQ9NYB0 399 aa17.56■□□□□ 0.4
SREBF1-215ENST00000487401 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
SREBF1-215ENST00000487401 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
SREBF1-215ENST00000487401 BRWD3Q6RI45 1802 aa17.55■□□□□ 0.4
SREBF1-215ENST00000487401 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
SREBF1-215ENST00000487401 SLIT3O75094 1523 aa17.54■□□□□ 0.4
SREBF1-215ENST00000487401 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
SREBF1-215ENST00000487401 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-215ENST00000487401 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-215ENST00000487401 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
SREBF1-215ENST00000487401 THSD7AQ9UPZ6 1657 aa17.54■□□□□ 0.4
SREBF1-215ENST00000487401 DDB1Q16531 1140 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms