RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KNDC1Q76NI1 1749 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 RGPD3A6NKT7 1758 aaPredicted RBP18.11■□□□□ 0.49
TRIM56-204ENST00000487252 RGPD4Q7Z3J3 1758 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 TRPM3Q9HCF6 1732 aaPredicted RBP18.1■□□□□ 0.49
TRIM56-204ENST00000487252 CRYBG1Q9Y4K1 1723 aa18.1■□□□□ 0.49
TRIM56-204ENST00000487252 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
TRIM56-204ENST00000487252 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
TRIM56-204ENST00000487252 ALS2Q96Q42 1657 aa18.09■□□□□ 0.49
TRIM56-204ENST00000487252 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
TRIM56-204ENST00000487252 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
TRIM56-204ENST00000487252 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
TRIM56-204ENST00000487252 SYT17Q9BSW7 474 aa18.08■□□□□ 0.48
TRIM56-204ENST00000487252 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
TRIM56-204ENST00000487252 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
TRIM56-204ENST00000487252 FHDC1Q9C0D6 1143 aaPredicted RBP18.05■□□□□ 0.48
TRIM56-204ENST00000487252 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
TRIM56-204ENST00000487252 BARGINQ6ZT62 677 aa18.03■□□□□ 0.48
TRIM56-204ENST00000487252 PLSCR1O15162 318 aa18.02■□□□□ 0.48
TRIM56-204ENST00000487252 APLP2Q06481 763 aa18.02■□□□□ 0.48
TRIM56-204ENST00000487252 STK26Q9P289 416 aa18.02■□□□□ 0.48
TRIM56-204ENST00000487252 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
TRIM56-204ENST00000487252 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
TRIM56-204ENST00000487252 SGIP1Q9BQI5 828 aa18.01■□□□□ 0.47
TRIM56-204ENST00000487252 SHANK3Q9BYB0 1731 aa18.01■□□□□ 0.47
TRIM56-204ENST00000487252 GOLGB1Q14789 3259 aaKnown RBP18■□□□□ 0.47
TRIM56-204ENST00000487252 ZBTB7AO95365 584 aa18■□□□□ 0.47
TRIM56-204ENST00000487252 PDE3BQ13370 1112 aa18■□□□□ 0.47
TRIM56-204ENST00000487252 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
TRIM56-204ENST00000487252 MAP3K5Q99683 1374 aa17.99■□□□□ 0.47
TRIM56-204ENST00000487252 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
TRIM56-204ENST00000487252 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
TRIM56-204ENST00000487252 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
TRIM56-204ENST00000487252 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
TRIM56-204ENST00000487252 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
TRIM56-204ENST00000487252 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
TRIM56-204ENST00000487252 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
TRIM56-204ENST00000487252 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
TRIM56-204ENST00000487252 PROM2Q8N271 834 aa17.95■□□□□ 0.46
TRIM56-204ENST00000487252 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
TRIM56-204ENST00000487252 TMEM132EQ6IEE7 984 aa17.94■□□□□ 0.46
TRIM56-204ENST00000487252 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
TRIM56-204ENST00000487252 SSH2Q76I76 1423 aa17.93■□□□□ 0.46
TRIM56-204ENST00000487252 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
TRIM56-204ENST00000487252 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
TRIM56-204ENST00000487252 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
TRIM56-204ENST00000487252 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
TRIM56-204ENST00000487252 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
TRIM56-204ENST00000487252 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
TRIM56-204ENST00000487252 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
TRIM56-204ENST00000487252 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
TRIM56-204ENST00000487252 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.46
TRIM56-204ENST00000487252 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.46
TRIM56-204ENST00000487252 PIK3C2GO75747 1445 aa17.89■□□□□ 0.46
TRIM56-204ENST00000487252 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.46
TRIM56-204ENST00000487252 HSPA6P17066 643 aa17.88■□□□□ 0.45
TRIM56-204ENST00000487252 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
TRIM56-204ENST00000487252 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
TRIM56-204ENST00000487252 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
TRIM56-204ENST00000487252 ARXQ96QS3 562 aa17.87■□□□□ 0.45
TRIM56-204ENST00000487252 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
TRIM56-204ENST00000487252 SLC15A2Q16348 729 aa17.86■□□□□ 0.45
TRIM56-204ENST00000487252 GPR162Q16538 588 aa17.86■□□□□ 0.45
TRIM56-204ENST00000487252 LARP1Q6PKG0 1096 aaKnown RBP17.86■□□□□ 0.45
TRIM56-204ENST00000487252 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
TRIM56-204ENST00000487252 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
TRIM56-204ENST00000487252 ATP7BP35670 1465 aa17.85■□□□□ 0.45
TRIM56-204ENST00000487252 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
TRIM56-204ENST00000487252 BCL9O00512 1426 aa17.84■□□□□ 0.45
TRIM56-204ENST00000487252 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.45
TRIM56-204ENST00000487252 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
TRIM56-204ENST00000487252 AATKQ6ZMQ8 1374 aa17.82■□□□□ 0.44
TRIM56-204ENST00000487252 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
TRIM56-204ENST00000487252 EVA1CP58658 441 aa17.82■□□□□ 0.44
TRIM56-204ENST00000487252 LRRC37A3O60309 1634 aa17.82■□□□□ 0.44
TRIM56-204ENST00000487252 ZC3H6P61129 1189 aaKnown RBP17.81■□□□□ 0.44
TRIM56-204ENST00000487252 TXNRD1Q16881 649 aa17.8■□□□□ 0.44
TRIM56-204ENST00000487252 PRAM1Q96QH2 718 aa17.8■□□□□ 0.44
TRIM56-204ENST00000487252 COL24A1Q17RW2 1714 aa17.8■□□□□ 0.44
TRIM56-204ENST00000487252 CPDO75976 1380 aa17.79■□□□□ 0.44
TRIM56-204ENST00000487252 TULP4Q9NRJ4 1543 aa17.79■□□□□ 0.44
TRIM56-204ENST00000487252 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
TRIM56-204ENST00000487252 PAPPAQ13219 1627 aa17.77■□□□□ 0.44
TRIM56-204ENST00000487252 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.44
TRIM56-204ENST00000487252 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
TRIM56-204ENST00000487252 COL5A2P05997 1499 aaPredicted RBP17.76■□□□□ 0.43
TRIM56-204ENST00000487252 SAFB2Q14151 953 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRIM56-204ENST00000487252 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
TRIM56-204ENST00000487252 CRB1P82279 1406 aa17.74■□□□□ 0.43
TRIM56-204ENST00000487252 ITGAEP38570 1179 aa17.74■□□□□ 0.43
TRIM56-204ENST00000487252 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
TRIM56-204ENST00000487252 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
TRIM56-204ENST00000487252 DDB1Q16531 1140 aa17.72■□□□□ 0.43
TRIM56-204ENST00000487252 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
TRIM56-204ENST00000487252 MARCH10Q8NA82 808 aaPredicted RBP17.72■□□□□ 0.43
TRIM56-204ENST00000487252 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
TRIM56-204ENST00000487252 ADCY9O60503 1353 aa17.71■□□□□ 0.43
TRIM56-204ENST00000487252 WNK3Q9BYP7 1800 aa17.71■□□□□ 0.43
TRIM56-204ENST00000487252 GRIN3BO60391 1043 aa17.71■□□□□ 0.43
TRIM56-204ENST00000487252 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRIM56-204ENST00000487252 GPBP1L1Q9HC44 474 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms