RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
PHTF1-211ENST00000486855 AAASQ9NRG9 546 aa9.24□□□□□ -0.93
PHTF1-211ENST00000486855 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
PHTF1-211ENST00000486855 CDC42BPAQ5VT25 1732 aa9.23□□□□□ -0.93
PHTF1-211ENST00000486855 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
PHTF1-211ENST00000486855 SLC6A16Q9GZN6 736 aa9.22□□□□□ -0.93
PHTF1-211ENST00000486855 BCORL1Q5H9F3 1711 aa9.22□□□□□ -0.93
PHTF1-211ENST00000486855 NEO1Q92859 1461 aa9.21□□□□□ -0.94
PHTF1-211ENST00000486855 ARHGEF40Q8TER5 1519 aa9.21□□□□□ -0.94
PHTF1-211ENST00000486855 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
PHTF1-211ENST00000486855 ZMYM4Q5VZL5 1548 aa9.2□□□□□ -0.94
PHTF1-211ENST00000486855 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
PHTF1-211ENST00000486855 NR1I2O75469 434 aa9.19□□□□□ -0.94
PHTF1-211ENST00000486855 PUS10Q3MIT2 529 aaKnown RBP9.19□□□□□ -0.94
PHTF1-211ENST00000486855 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
PHTF1-211ENST00000486855 PXYLP1Q8TE99 480 aa9.19□□□□□ -0.94
PHTF1-211ENST00000486855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
PHTF1-211ENST00000486855 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
PHTF1-211ENST00000486855 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
PHTF1-211ENST00000486855 FMN1Q68DA7 1419 aa9.17□□□□□ -0.94
PHTF1-211ENST00000486855 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
PHTF1-211ENST00000486855 MADDQ8WXG6 1647 aa9.16□□□□□ -0.94
PHTF1-211ENST00000486855 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
PHTF1-211ENST00000486855 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
PHTF1-211ENST00000486855 FER1L4A9Z1Z3 1794 aa9.16□□□□□ -0.94
PHTF1-211ENST00000486855 FANCAO15360 1455 aa9.15□□□□□ -0.94
PHTF1-211ENST00000486855 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
PHTF1-211ENST00000486855 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
PHTF1-211ENST00000486855 TOR4AQ9NXH8 423 aa9.15□□□□□ -0.94
PHTF1-211ENST00000486855 RIMS1Q86UR5 1692 aaKnown RBP9.15□□□□□ -0.94
PHTF1-211ENST00000486855 HECW2Q9P2P5 1572 aa9.15□□□□□ -0.95
PHTF1-211ENST00000486855 AVPP01185 164 aa9.14□□□□□ -0.95
PHTF1-211ENST00000486855 FOXC1Q12948 553 aa9.14□□□□□ -0.95
PHTF1-211ENST00000486855 SPSB2Q99619 263 aa9.14□□□□□ -0.95
PHTF1-211ENST00000486855 KDM5CP41229 1560 aa9.14□□□□□ -0.95
PHTF1-211ENST00000486855 PHLDB1Q86UU1 1377 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 FCHSD2O94868 740 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
PHTF1-211ENST00000486855 FYCO1Q9BQS8 1478 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 AKNAQ7Z591 1439 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
PHTF1-211ENST00000486855 MORN1Q5T089 497 aa9.12□□□□□ -0.95
PHTF1-211ENST00000486855 PLCH2O75038 1416 aa9.12□□□□□ -0.95
PHTF1-211ENST00000486855 TROQ12816 1431 aaPredicted RBP9.12□□□□□ -0.95
PHTF1-211ENST00000486855 ABCA6Q8N139 1617 aa9.12□□□□□ -0.95
PHTF1-211ENST00000486855 KIDINS220Q9ULH0 1771 aa9.12□□□□□ -0.95
PHTF1-211ENST00000486855 ABCC1P33527 1531 aa9.11□□□□□ -0.95
PHTF1-211ENST00000486855 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
PHTF1-211ENST00000486855 CCDC18Q5T9S5 1454 aa9.11□□□□□ -0.95
PHTF1-211ENST00000486855 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
PHTF1-211ENST00000486855 RPIAP49247 311 aa9.11□□□□□ -0.95
PHTF1-211ENST00000486855 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
PHTF1-211ENST00000486855 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
PHTF1-211ENST00000486855 POGZQ7Z3K3 1410 aa9.11□□□□□ -0.95
PHTF1-211ENST00000486855 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
PHTF1-211ENST00000486855 SEMA3EO15041 775 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
PHTF1-211ENST00000486855 SAMD9LQ8IVG5 1584 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 DIP2CQ9Y2E4 1556 aa9.1□□□□□ -0.95
PHTF1-211ENST00000486855 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
PHTF1-211ENST00000486855 FECHP22830 423 aa9.09□□□□□ -0.95
PHTF1-211ENST00000486855 ARHGEF12Q9NZN5 1544 aa9.09□□□□□ -0.95
PHTF1-211ENST00000486855 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
PHTF1-211ENST00000486855 GPR37O15354 613 aa9.08□□□□□ -0.96
PHTF1-211ENST00000486855 OATP04181 439 aa9.08□□□□□ -0.96
PHTF1-211ENST00000486855 REREQ9P2R6 1566 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 CLIP1P30622 1438 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 ARHGAP5Q13017 1502 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 FUT2Q10981 343 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 NFX1Q12986 1120 aaKnown RBP9.07□□□□□ -0.96
PHTF1-211ENST00000486855 PTPRMP28827 1452 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 MAGI2Q86UL8 1455 aa9.07□□□□□ -0.96
PHTF1-211ENST00000486855 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
PHTF1-211ENST00000486855 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
PHTF1-211ENST00000486855 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
PHTF1-211ENST00000486855 TIAM1Q13009 1591 aa9.06□□□□□ -0.96
PHTF1-211ENST00000486855 C3P01024 1663 aa9.06□□□□□ -0.96
PHTF1-211ENST00000486855 ADGBQ8N7X0 1667 aa9.05□□□□□ -0.96
PHTF1-211ENST00000486855 INO80Q9ULG1 1556 aaPredicted RBP9.05□□□□□ -0.96
PHTF1-211ENST00000486855 HIC1Q14526 733 aa9.05□□□□□ -0.96
PHTF1-211ENST00000486855 SCAPERQ9BY12 1400 aa9.05□□□□□ -0.96
PHTF1-211ENST00000486855 PREX1Q8TCU6 1659 aa9.04□□□□□ -0.96
PHTF1-211ENST00000486855 AXIN1O15169 862 aa9.04□□□□□ -0.96
PHTF1-211ENST00000486855 ZNF518AQ6AHZ1 1483 aa9.03□□□□□ -0.96
PHTF1-211ENST00000486855 SUPT6HQ7KZ85 1726 aaKnown RBP9.03□□□□□ -0.96
PHTF1-211ENST00000486855 WFS1O76024 890 aa9.03□□□□□ -0.96
PHTF1-211ENST00000486855 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
PHTF1-211ENST00000486855 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
PHTF1-211ENST00000486855 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
PHTF1-211ENST00000486855 DAXXQ9UER7 740 aaPredicted RBP9.03□□□□□ -0.96
PHTF1-211ENST00000486855 SYCP2Q9BX26 1530 aa9.03□□□□□ -0.96
PHTF1-211ENST00000486855 LMTK3Q96Q04 1460 aa9.02□□□□□ -0.96
PHTF1-211ENST00000486855 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 GPATCH8Q9UKJ3 1502 aaKnown RBP9.02□□□□□ -0.97
PHTF1-211ENST00000486855 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
PHTF1-211ENST00000486855 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms