RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	PLEKHG3	A1L390	1219 aa		12.15	□□□□□ -0.46
KIFC1-213	ENST00000486695	NUTM2F	A1L443	756 aa		12.15	□□□□□ -0.46
KIFC1-213	ENST00000486695	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
KIFC1-213	ENST00000486695	PROSER2	Q86WR7	435 aa	Predicted RBP	12.15	□□□□□ -0.46
KIFC1-213	ENST00000486695	XIRP1	Q702N8	1843 aa	Known RBP	12.14	□□□□□ -0.47
KIFC1-213	ENST00000486695	CPSF1	Q10570	1443 aa	Known RBP	12.14	□□□□□ -0.47
KIFC1-213	ENST00000486695	ANKAR	Q7Z5J8	1434 aa		12.14	□□□□□ -0.47
KIFC1-213	ENST00000486695	FMN2	Q9NZ56	1722 aa		12.14	□□□□□ -0.47
KIFC1-213	ENST00000486695	KIF20B	Q96Q89	1820 aa		12.14	□□□□□ -0.47
KIFC1-213	ENST00000486695	TOPAZ1	Q8N9V7	1692 aa		12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	EDC4	Q6P2E9	1401 aa	Known RBP	12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	AKAP12	Q02952	1782 aa		12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	FYB1	O15117	783 aa		12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	ANKRD26	Q9UPS8	1709 aa		12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	NKTR	P30414	1462 aa	Known RBP	12.13	□□□□□ -0.47
KIFC1-213	ENST00000486695	ADGRL3	Q9HAR2	1447 aa		12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	MON2	Q7Z3U7	1717 aa		12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	NALCN	Q8IZF0	1738 aa		12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	WDR43	Q15061	677 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	GGNBP2	Q9H3C7	697 aa		12.12	□□□□□ -0.47
KIFC1-213	ENST00000486695	ACE	P12821	1306 aa		12.11	□□□□□ -0.47
KIFC1-213	ENST00000486695	TNNT2	P45379	298 aa	Predicted RBP	12.11	□□□□□ -0.47
KIFC1-213	ENST00000486695	NGDN	Q8NEJ9	315 aa	Known RBP	12.11	□□□□□ -0.47
KIFC1-213	ENST00000486695	CFAP53	Q96M91	514 aa		12.11	□□□□□ -0.47
KIFC1-213	ENST00000486695	RGPD8	O14715	1765 aa	Predicted RBP	12.1	□□□□□ -0.47
KIFC1-213	ENST00000486695	FKBP8	Q14318	412 aa		12.1	□□□□□ -0.47
KIFC1-213	ENST00000486695	RBM33	Q96EV2	1170 aa	Known RBP	12.1	□□□□□ -0.47
KIFC1-213	ENST00000486695	PMFBP1	Q8TBY8	1022 aa		12.09	□□□□□ -0.47
KIFC1-213	ENST00000486695	POLR3A	O14802	1390 aa	Predicted RBP	12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	INSR	P06213	1382 aa		12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	TMEM94	Q12767	1356 aa		12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	COG3	Q96JB2	828 aa		12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	C19orf44	Q9H6X5	657 aa		12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	NCOA3	Q9Y6Q9	1424 aa		12.08	□□□□□ -0.48
KIFC1-213	ENST00000486695	USP6	P35125	1406 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	MTHFS	P49914	203 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	NME9	Q86XW9	330 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	RGS17	Q9UGC6	210 aa	Predicted RBP	12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	PHF8	Q9UPP1	1060 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	TTC21B	Q7Z4L5	1316 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	TTC21A	Q8NDW8	1320 aa		12.07	□□□□□ -0.48
KIFC1-213	ENST00000486695	ATF3	P18847	181 aa		12.06	□□□□□ -0.48
KIFC1-213	ENST00000486695	ZBED9	Q6R2W3	1325 aa		12.06	□□□□□ -0.48
KIFC1-213	ENST00000486695	ESCO1	Q5FWF5	840 aa		12.05	□□□□□ -0.48
KIFC1-213	ENST00000486695	ADAMTS8	Q9UP79	889 aa		12.05	□□□□□ -0.48
KIFC1-213	ENST00000486695	NRK	Q7Z2Y5	1582 aa		12.05	□□□□□ -0.48
KIFC1-213	ENST00000486695	NUDC	Q9Y266	331 aa		12.04	□□□□□ -0.48
KIFC1-213	ENST00000486695	ROBO1	Q9Y6N7	1651 aa		12.03	□□□□□ -0.48
KIFC1-213	ENST00000486695	PSME1	Q06323	249 aa		12.03	□□□□□ -0.48
KIFC1-213	ENST00000486695	MSH6	P52701	1360 aa		12.03	□□□□□ -0.48
KIFC1-213	ENST00000486695	BLM	P54132	1417 aa	Predicted RBP	12.03	□□□□□ -0.48
KIFC1-213	ENST00000486695	SSH2	Q76I76	1423 aa		12.03	□□□□□ -0.48
KIFC1-213	ENST00000486695	CADPS2	Q86UW7	1296 aa		12.02	□□□□□ -0.49
KIFC1-213	ENST00000486695	ZRANB1	Q9UGI0	708 aa		12.02	□□□□□ -0.49
KIFC1-213	ENST00000486695	AATK	Q6ZMQ8	1374 aa		12.02	□□□□□ -0.49
KIFC1-213	ENST00000486695	MAP2	P11137	1827 aa	Known RBP	12.02	□□□□□ -0.49
KIFC1-213	ENST00000486695	DCC	P43146	1447 aa		12.02	□□□□□ -0.49
KIFC1-213	ENST00000486695	PAK3	O75914	559 aa	Predicted RBP	12.01	□□□□□ -0.49
KIFC1-213	ENST00000486695	KIF1A	Q12756	1690 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	PPM1G	O15355	546 aa	Predicted RBP	12	□□□□□ -0.49
KIFC1-213	ENST00000486695	POTEA	Q6S8J7	498 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	ORAI2	Q96SN7	254 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	SLAIN2	Q9P270	581 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	POLK	Q9UBT6	870 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	USP31	Q70CQ4	1352 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	C1orf167	Q5SNV9	1468 aa		12	□□□□□ -0.49
KIFC1-213	ENST00000486695	DIAPH1	O60610	1272 aa	Known RBP	11.99	□□□□□ -0.49
KIFC1-213	ENST00000486695	NLRP6	P59044	892 aa		11.99	□□□□□ -0.49
KIFC1-213	ENST00000486695	ABTB2	Q8N961	1025 aa		11.99	□□□□□ -0.49
KIFC1-213	ENST00000486695	SHPRH	Q149N8	1683 aa		11.99	□□□□□ -0.49
KIFC1-213	ENST00000486695	OVOS2	A0A0J9YW53	1432 aa		11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	OVOS2	Q6IE36	1432 aa		11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	NGEF	Q8N5V2	710 aa		11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	PNN	Q9H307	717 aa	Known RBP	11.98	□□□□□ -0.49
KIFC1-213	ENST00000486695	MST1R	Q04912	1400 aa		11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	PNPLA6	Q8IY17	1366 aa		11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	U2SURP	O15042	1029 aa	Known RBP	11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	FOXO3	O43524	673 aa		11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	PDE3B	Q13370	1112 aa		11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	SALL2	Q9Y467	1007 aa	Predicted RBP	11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	PHLPP1	O60346	1717 aa		11.97	□□□□□ -0.49
KIFC1-213	ENST00000486695	SMG6	Q86US8	1419 aa	Known RBP	11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	SENP3-EIF4A1	A0A087X0R7	540 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	FBLN1	P23142	703 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	KRT28	Q7Z3Y7	464 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	CCDC146	Q8IYE0	955 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	RUNDC1	Q96C34	613 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	EMILIN1	Q9Y6C2	1016 aa		11.96	□□□□□ -0.49
KIFC1-213	ENST00000486695	PIK3C2A	O00443	1686 aa		11.96	□□□□□ -0.5
KIFC1-213	ENST00000486695	COL3A1	P02461	1466 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC1-213	ENST00000486695	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC1-213	ENST00000486695	JCAD	Q9P266	1359 aa		11.95	□□□□□ -0.5
KIFC1-213	ENST00000486695	USP54	Q70EL1	1684 aa		11.94	□□□□□ -0.5
KIFC1-213	ENST00000486695	SOX12	O15370	315 aa		11.94	□□□□□ -0.5
KIFC1-213	ENST00000486695	NEFM	P07197	916 aa		11.94	□□□□□ -0.5
KIFC1-213	ENST00000486695	RRS1	Q15050	365 aa	Known RBP	11.94	□□□□□ -0.5
KIFC1-213	ENST00000486695	APAF1	O14727	1248 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms