RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 CCDC9Q9Y3X0 531 aaKnown RBP15.63■□□□□ 0.09
SNX21-211ENST00000486336 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
SNX21-211ENST00000486336 ABTB2Q8N961 1025 aa15.62■□□□□ 0.09
SNX21-211ENST00000486336 BCL9LQ86UU0 1499 aa15.62■□□□□ 0.09
SNX21-211ENST00000486336 ATRNO75882 1429 aa15.61■□□□□ 0.09
SNX21-211ENST00000486336 GJD4Q96KN9 370 aaPredicted RBP15.61■□□□□ 0.09
SNX21-211ENST00000486336 RALGAPBQ86X10 1494 aa15.6■□□□□ 0.09
SNX21-211ENST00000486336 CCER1Q8TC90 406 aaPredicted RBP15.6■□□□□ 0.09
SNX21-211ENST00000486336 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
SNX21-211ENST00000486336 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
SNX21-211ENST00000486336 RGS12O14924 1447 aa15.6■□□□□ 0.09
SNX21-211ENST00000486336 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
SNX21-211ENST00000486336 ZC3H6P61129 1189 aaKnown RBP15.59■□□□□ 0.09
SNX21-211ENST00000486336 PRDM11Q9NQV5 511 aa15.59■□□□□ 0.09
SNX21-211ENST00000486336 BTG4Q9NY30 223 aa15.59■□□□□ 0.09
SNX21-211ENST00000486336 SLIT2O94813 1529 aa15.58■□□□□ 0.09
SNX21-211ENST00000486336 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
SNX21-211ENST00000486336 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
SNX21-211ENST00000486336 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
SNX21-211ENST00000486336 ABCA3Q99758 1704 aa15.57■□□□□ 0.08
SNX21-211ENST00000486336 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
SNX21-211ENST00000486336 ZBTB7CA1YPR0 619 aa15.56■□□□□ 0.08
SNX21-211ENST00000486336 VPS72Q15906 364 aa15.56■□□□□ 0.08
SNX21-211ENST00000486336 UPF1Q92900 1129 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNX21-211ENST00000486336 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
SNX21-211ENST00000486336 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
SNX21-211ENST00000486336 CLSPNQ9HAW4 1339 aa15.55■□□□□ 0.08
SNX21-211ENST00000486336 NLRP6P59044 892 aa15.55■□□□□ 0.08
SNX21-211ENST00000486336 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
SNX21-211ENST00000486336 A0A0G2JS52 829 aa15.54■□□□□ 0.08
SNX21-211ENST00000486336 MYT1Q01538 1121 aa15.54■□□□□ 0.08
SNX21-211ENST00000486336 USP6P35125 1406 aa15.53■□□□□ 0.08
SNX21-211ENST00000486336 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
SNX21-211ENST00000486336 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
SNX21-211ENST00000486336 PLCH1Q4KWH8 1693 aa15.53■□□□□ 0.08
SNX21-211ENST00000486336 BRD4O60885 1362 aaPredicted RBP15.52■□□□□ 0.08
SNX21-211ENST00000486336 SBNO2Q9Y2G9 1366 aa15.52■□□□□ 0.08
SNX21-211ENST00000486336 GCP02774 474 aa15.52■□□□□ 0.08
SNX21-211ENST00000486336 EVA1CP58658 441 aa15.52■□□□□ 0.08
SNX21-211ENST00000486336 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
SNX21-211ENST00000486336 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
SNX21-211ENST00000486336 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
SNX21-211ENST00000486336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNX21-211ENST00000486336 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
SNX21-211ENST00000486336 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
SNX21-211ENST00000486336 COL14A1Q05707 1796 aaKnown RBP15.51■□□□□ 0.07
SNX21-211ENST00000486336 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
SNX21-211ENST00000486336 SOX12O15370 315 aa15.5■□□□□ 0.07
SNX21-211ENST00000486336 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
SNX21-211ENST00000486336 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
SNX21-211ENST00000486336 USP19O94966 1318 aa15.49■□□□□ 0.07
SNX21-211ENST00000486336 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
SNX21-211ENST00000486336 TESK2Q96S53 571 aa15.49■□□□□ 0.07
SNX21-211ENST00000486336 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
SNX21-211ENST00000486336 GLI3P10071 1580 aa15.49■□□□□ 0.07
SNX21-211ENST00000486336 USP47Q96K76 1375 aa15.49■□□□□ 0.07
SNX21-211ENST00000486336 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
SNX21-211ENST00000486336 TTC21AQ8NDW8 1320 aa15.47■□□□□ 0.07
SNX21-211ENST00000486336 TMF1P82094 1093 aa15.47■□□□□ 0.07
SNX21-211ENST00000486336 TERF2IPQ9NYB0 399 aa15.47■□□□□ 0.07
SNX21-211ENST00000486336 USP35Q9P2H5 1018 aa15.47■□□□□ 0.07
SNX21-211ENST00000486336 SPATA31A5Q5VU36 1347 aa15.46■□□□□ 0.07
SNX21-211ENST00000486336 SPATA31A7Q8IWB4 1347 aa15.46■□□□□ 0.07
SNX21-211ENST00000486336 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
SNX21-211ENST00000486336 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
SNX21-211ENST00000486336 PUS7Q96PZ0 661 aaKnown RBP15.46■□□□□ 0.07
SNX21-211ENST00000486336 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
SNX21-211ENST00000486336 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
SNX21-211ENST00000486336 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
SNX21-211ENST00000486336 NRAPQ86VF7 1730 aa15.45■□□□□ 0.06
SNX21-211ENST00000486336 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
SNX21-211ENST00000486336 KRT27Q7Z3Y8 459 aa15.44■□□□□ 0.06
SNX21-211ENST00000486336 NME9Q86XW9 330 aa15.44■□□□□ 0.06
SNX21-211ENST00000486336 CPDO75976 1380 aa15.44■□□□□ 0.06
SNX21-211ENST00000486336 SPATA31A1Q5TZJ5 1347 aa15.43■□□□□ 0.06
SNX21-211ENST00000486336 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
SNX21-211ENST00000486336 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
SNX21-211ENST00000486336 PIK3C2AO00443 1686 aa15.42■□□□□ 0.06
SNX21-211ENST00000486336 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
SNX21-211ENST00000486336 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
SNX21-211ENST00000486336 A0A1W2PP64 1363 aa15.41■□□□□ 0.06
SNX21-211ENST00000486336 CDCA8Q53HL2 280 aa15.41■□□□□ 0.06
SNX21-211ENST00000486336 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
SNX21-211ENST00000486336 POLR3GLQ9BT43 218 aa15.4■□□□□ 0.06
SNX21-211ENST00000486336 AATKQ6ZMQ8 1374 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 SLIT3O75094 1523 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 CSB-PGBD3P0DP91 1061 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 SF3B2Q13435 895 aaKnown RBP15.39■□□□□ 0.05
SNX21-211ENST00000486336 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 ARHGEF25Q86VW2 580 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 EDC4Q6P2E9 1401 aaKnown RBP15.39■□□□□ 0.05
SNX21-211ENST00000486336 MON2Q7Z3U7 1717 aa15.39■□□□□ 0.05
SNX21-211ENST00000486336 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
SNX21-211ENST00000486336 TOM1L2Q6ZVM7 507 aa15.38■□□□□ 0.05
SNX21-211ENST00000486336 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
SNX21-211ENST00000486336 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
SNX21-211ENST00000486336 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNX21-211ENST00000486336 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms