RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ZRANB1Q9UGI0 708 aa19.46■□□□□ 0.71
COL9A1-207ENST00000486080 PHF8Q9UPP1 1060 aa19.45■□□□□ 0.7
COL9A1-207ENST00000486080 TTC21BQ7Z4L5 1316 aa19.45■□□□□ 0.7
COL9A1-207ENST00000486080 ESCO1Q5FWF5 840 aa19.44■□□□□ 0.7
COL9A1-207ENST00000486080 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
COL9A1-207ENST00000486080 ORAI2Q96SN7 254 aa19.43■□□□□ 0.7
COL9A1-207ENST00000486080 ATF3P18847 181 aa19.42■□□□□ 0.7
COL9A1-207ENST00000486080 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
COL9A1-207ENST00000486080 DCCP43146 1447 aa19.41■□□□□ 0.7
COL9A1-207ENST00000486080 MST1RQ04912 1400 aa19.4■□□□□ 0.7
COL9A1-207ENST00000486080 MSH6P52701 1360 aa19.4■□□□□ 0.7
COL9A1-207ENST00000486080 FBLN1P23142 703 aa19.39■□□□□ 0.69
COL9A1-207ENST00000486080 MTHFSP49914 203 aa19.39■□□□□ 0.69
COL9A1-207ENST00000486080 LTBP4Q8N2S1 1624 aa19.38■□□□□ 0.69
COL9A1-207ENST00000486080 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL9A1-207ENST00000486080 CADPS2Q86UW7 1296 aa19.37■□□□□ 0.69
COL9A1-207ENST00000486080 COG3Q96JB2 828 aa19.37■□□□□ 0.69
COL9A1-207ENST00000486080 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
COL9A1-207ENST00000486080 TTC21AQ8NDW8 1320 aa19.37■□□□□ 0.69
COL9A1-207ENST00000486080 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
COL9A1-207ENST00000486080 FOXO3O43524 673 aa19.35■□□□□ 0.69
COL9A1-207ENST00000486080 CENPBP07199 599 aaPredicted RBP19.35■□□□□ 0.69
COL9A1-207ENST00000486080 PSME1Q06323 249 aa19.35■□□□□ 0.69
COL9A1-207ENST00000486080 KIF1AQ12756 1690 aa19.35■□□□□ 0.69
COL9A1-207ENST00000486080 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
COL9A1-207ENST00000486080 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
COL9A1-207ENST00000486080 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-207ENST00000486080 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.69
COL9A1-207ENST00000486080 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.69
COL9A1-207ENST00000486080 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
COL9A1-207ENST00000486080 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
COL9A1-207ENST00000486080 MARF1Q9Y4F3 1742 aaKnown RBP19.32■□□□□ 0.68
COL9A1-207ENST00000486080 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
COL9A1-207ENST00000486080 POLKQ9UBT6 870 aa19.32■□□□□ 0.68
COL9A1-207ENST00000486080 WDR43Q15061 677 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL9A1-207ENST00000486080 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
COL9A1-207ENST00000486080 USP31Q70CQ4 1352 aa19.31■□□□□ 0.68
COL9A1-207ENST00000486080 NLRP6P59044 892 aa19.3■□□□□ 0.68
COL9A1-207ENST00000486080 ABTB2Q8N961 1025 aa19.3■□□□□ 0.68
COL9A1-207ENST00000486080 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
COL9A1-207ENST00000486080 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
COL9A1-207ENST00000486080 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
COL9A1-207ENST00000486080 AATKQ6ZMQ8 1374 aa19.29■□□□□ 0.68
COL9A1-207ENST00000486080 TRPM3Q9HCF6 1732 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-207ENST00000486080 RRS1Q15050 365 aaKnown RBP19.29■□□□□ 0.68
COL9A1-207ENST00000486080 USP54Q70EL1 1684 aa19.28■□□□□ 0.68
COL9A1-207ENST00000486080 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-207ENST00000486080 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-207ENST00000486080 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
COL9A1-207ENST00000486080 SOX12O15370 315 aa19.28■□□□□ 0.68
COL9A1-207ENST00000486080 SLAIN2Q9P270 581 aa19.28■□□□□ 0.68
COL9A1-207ENST00000486080 BLMP54132 1417 aaPredicted RBP19.27■□□□□ 0.68
COL9A1-207ENST00000486080 PNPLA6Q8IY17 1366 aa19.26■□□□□ 0.67
COL9A1-207ENST00000486080 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
COL9A1-207ENST00000486080 SMG6Q86US8 1419 aaKnown RBP19.25■□□□□ 0.67
COL9A1-207ENST00000486080 INSRP06213 1382 aa19.25■□□□□ 0.67
COL9A1-207ENST00000486080 PEAK1Q9H792 1746 aa19.23■□□□□ 0.67
COL9A1-207ENST00000486080 CDK12Q9NYV4 1490 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-207ENST00000486080 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
COL9A1-207ENST00000486080 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
COL9A1-207ENST00000486080 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
COL9A1-207ENST00000486080 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
COL9A1-207ENST00000486080 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
COL9A1-207ENST00000486080 DIAPH1O60610 1272 aaKnown RBP19.21■□□□□ 0.67
COL9A1-207ENST00000486080 PXDNQ92626 1479 aa19.2■□□□□ 0.66
COL9A1-207ENST00000486080 MAP3K19Q56UN5 1328 aa19.2■□□□□ 0.66
COL9A1-207ENST00000486080 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
COL9A1-207ENST00000486080 PLEKHG5O94827 1062 aa19.19■□□□□ 0.66
COL9A1-207ENST00000486080 U2AF1L5P0DN76 240 aaPredicted RBP19.19■□□□□ 0.66
COL9A1-207ENST00000486080 U2AF1Q01081 240 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL9A1-207ENST00000486080 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
COL9A1-207ENST00000486080 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
COL9A1-207ENST00000486080 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
COL9A1-207ENST00000486080 NFAT5O94916 1531 aa19.17■□□□□ 0.66
COL9A1-207ENST00000486080 LTN1O94822 1766 aa19.17■□□□□ 0.66
COL9A1-207ENST00000486080 IL13P35225 146 aa19.16■□□□□ 0.66
COL9A1-207ENST00000486080 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
COL9A1-207ENST00000486080 SLIT3O75094 1523 aa19.15■□□□□ 0.66
COL9A1-207ENST00000486080 TNS3Q68CZ2 1445 aa19.15■□□□□ 0.66
COL9A1-207ENST00000486080 USP19O94966 1318 aa19.14■□□□□ 0.65
COL9A1-207ENST00000486080 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
COL9A1-207ENST00000486080 APAF1O14727 1248 aa19.14■□□□□ 0.65
COL9A1-207ENST00000486080 AMPHP49418 695 aa19.14■□□□□ 0.65
COL9A1-207ENST00000486080 MED1Q15648 1581 aaPredicted RBP19.13■□□□□ 0.65
COL9A1-207ENST00000486080 SPATA31A3Q5VYP0 1347 aa19.13■□□□□ 0.65
COL9A1-207ENST00000486080 FLT4P35916 1363 aa19.13■□□□□ 0.65
COL9A1-207ENST00000486080 GCP02774 474 aa19.13■□□□□ 0.65
COL9A1-207ENST00000486080 EIF4A2Q14240 407 aaKnown RBP19.13■□□□□ 0.65
COL9A1-207ENST00000486080 CERKQ8TCT0 537 aa19.13■□□□□ 0.65
COL9A1-207ENST00000486080 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
COL9A1-207ENST00000486080 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
COL9A1-207ENST00000486080 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
COL9A1-207ENST00000486080 ROBO1Q9Y6N7 1651 aa19.12■□□□□ 0.65
COL9A1-207ENST00000486080 IQSEC2Q5JU85 1478 aa19.11■□□□□ 0.65
COL9A1-207ENST00000486080 HOXC9P31274 260 aa19.11■□□□□ 0.65
COL9A1-207ENST00000486080 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 HMOX1P09601 288 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 CABLES1Q8TDN4 633 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 PHRF1Q9P1Y6 1649 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms