RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
SCAF4-206ENST00000485790 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
SCAF4-206ENST00000485790 USP32Q8NFA0 1604 aa19.75■□□□□ 0.75
SCAF4-206ENST00000485790 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
SCAF4-206ENST00000485790 NUTM2GQ5VZR2 741 aa19.74■□□□□ 0.75
SCAF4-206ENST00000485790 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
SCAF4-206ENST00000485790 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 NLRP13Q86W25 1043 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 CABP2Q9NPB3 220 aa19.71■□□□□ 0.75
SCAF4-206ENST00000485790 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
SCAF4-206ENST00000485790 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
SCAF4-206ENST00000485790 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
SCAF4-206ENST00000485790 RGPD8O14715 1765 aaPredicted RBP19.7■□□□□ 0.74
SCAF4-206ENST00000485790 BAG6P46379 1132 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 CHRNA2Q15822 529 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 DEFB132Q7Z7B7 95 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 GLI3P10071 1580 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 KIAA0232Q92628 1395 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
SCAF4-206ENST00000485790 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
SCAF4-206ENST00000485790 ATP7BP35670 1465 aa19.67■□□□□ 0.74
SCAF4-206ENST00000485790 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
SCAF4-206ENST00000485790 GCP02774 474 aa19.66■□□□□ 0.74
SCAF4-206ENST00000485790 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
SCAF4-206ENST00000485790 SPATA31A1Q5TZJ5 1347 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 EP400Q96L91 3159 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 NLRP6P59044 892 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
SCAF4-206ENST00000485790 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
SCAF4-206ENST00000485790 BARGINQ6ZT62 677 aa19.62■□□□□ 0.73
SCAF4-206ENST00000485790 FAM182BQ5T319 152 aa19.61■□□□□ 0.73
SCAF4-206ENST00000485790 COL14A1Q05707 1796 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 ROCK2O75116 1388 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 TRPM3Q9HCF6 1732 aaPredicted RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 TCP11L2Q8N4U5 519 aa19.6■□□□□ 0.73
SCAF4-206ENST00000485790 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 SRCAPQ6ZRS2 3230 aa19.6■□□□□ 0.73
SCAF4-206ENST00000485790 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
SCAF4-206ENST00000485790 CPDO75976 1380 aa19.58■□□□□ 0.73
SCAF4-206ENST00000485790 USP19O94966 1318 aa19.58■□□□□ 0.73
SCAF4-206ENST00000485790 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.72
SCAF4-206ENST00000485790 EN1Q05925 392 aaPredicted RBP19.58■□□□□ 0.72
SCAF4-206ENST00000485790 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
SCAF4-206ENST00000485790 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
SCAF4-206ENST00000485790 ARHGEF28Q8N1W1 1705 aaKnown RBP19.57■□□□□ 0.72
SCAF4-206ENST00000485790 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
SCAF4-206ENST00000485790 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
SCAF4-206ENST00000485790 TRIM37O94972 964 aa19.55■□□□□ 0.72
SCAF4-206ENST00000485790 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
SCAF4-206ENST00000485790 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 APBA3O96018 575 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
SCAF4-206ENST00000485790 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 USP6P35125 1406 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
SCAF4-206ENST00000485790 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
SCAF4-206ENST00000485790 EZH2Q15910 746 aaKnown RBP19.49■□□□□ 0.71
SCAF4-206ENST00000485790 NBPF14Q5TI25 921 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 TMC1Q8TDI8 760 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CAMKK2Q96RR4 588 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CDCA7Q9BWT1 371 aaPredicted RBP19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CAMTA1Q9Y6Y1 1673 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 BRWD3Q6RI45 1802 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 CSB-PGBD3P0DP91 1061 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
SCAF4-206ENST00000485790 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
SCAF4-206ENST00000485790 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 SOX12O15370 315 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 DDB1Q16531 1140 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 HDGFL2Q7Z4V5 671 aaPredicted RBP19.46■□□□□ 0.71
SCAF4-206ENST00000485790 CRB1P82279 1406 aa19.45■□□□□ 0.7
SCAF4-206ENST00000485790 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
SCAF4-206ENST00000485790 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
SCAF4-206ENST00000485790 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
SCAF4-206ENST00000485790 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
SCAF4-206ENST00000485790 DISP2A7MBM2 1401 aa19.42■□□□□ 0.7
SCAF4-206ENST00000485790 CARD10Q9BWT7 1032 aa19.42■□□□□ 0.7
SCAF4-206ENST00000485790 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
SCAF4-206ENST00000485790 EXOC5O00471 708 aa19.41■□□□□ 0.7
SCAF4-206ENST00000485790 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
SCAF4-206ENST00000485790 SLC12A5Q9H2X9 1139 aa19.4■□□□□ 0.7
SCAF4-206ENST00000485790 SBNO2Q9Y2G9 1366 aa19.4■□□□□ 0.7
SCAF4-206ENST00000485790 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms