RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
SCAF4-206ENST00000485790 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
SCAF4-206ENST00000485790 USP32Q8NFA0 1604 aa19.75■□□□□ 0.75
SCAF4-206ENST00000485790 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
SCAF4-206ENST00000485790 NUTM2GQ5VZR2 741 aa19.74■□□□□ 0.75
SCAF4-206ENST00000485790 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
SCAF4-206ENST00000485790 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 NLRP13Q86W25 1043 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
SCAF4-206ENST00000485790 CABP2Q9NPB3 220 aa19.71■□□□□ 0.75
SCAF4-206ENST00000485790 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
SCAF4-206ENST00000485790 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
SCAF4-206ENST00000485790 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
SCAF4-206ENST00000485790 RGPD8O14715 1765 aaPredicted RBP19.7■□□□□ 0.74
SCAF4-206ENST00000485790 BAG6P46379 1132 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 CHRNA2Q15822 529 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 DEFB132Q7Z7B7 95 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
SCAF4-206ENST00000485790 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 GLI3P10071 1580 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 KIAA0232Q92628 1395 aa19.69■□□□□ 0.74
SCAF4-206ENST00000485790 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
SCAF4-206ENST00000485790 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
SCAF4-206ENST00000485790 ATP7BP35670 1465 aa19.67■□□□□ 0.74
SCAF4-206ENST00000485790 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
SCAF4-206ENST00000485790 GCP02774 474 aa19.66■□□□□ 0.74
SCAF4-206ENST00000485790 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
SCAF4-206ENST00000485790 SPATA31A1Q5TZJ5 1347 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 EP400Q96L91 3159 aa19.65■□□□□ 0.74
SCAF4-206ENST00000485790 NLRP6P59044 892 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
SCAF4-206ENST00000485790 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
SCAF4-206ENST00000485790 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
SCAF4-206ENST00000485790 BARGINQ6ZT62 677 aa19.62■□□□□ 0.73
SCAF4-206ENST00000485790 FAM182BQ5T319 152 aa19.61■□□□□ 0.73
SCAF4-206ENST00000485790 COL14A1Q05707 1796 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 ROCK2O75116 1388 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 TRPM3Q9HCF6 1732 aaPredicted RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 TCP11L2Q8N4U5 519 aa19.6■□□□□ 0.73
SCAF4-206ENST00000485790 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
SCAF4-206ENST00000485790 SRCAPQ6ZRS2 3230 aa19.6■□□□□ 0.73
SCAF4-206ENST00000485790 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
SCAF4-206ENST00000485790 CPDO75976 1380 aa19.58■□□□□ 0.73
SCAF4-206ENST00000485790 USP19O94966 1318 aa19.58■□□□□ 0.73
SCAF4-206ENST00000485790 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.72
SCAF4-206ENST00000485790 EN1Q05925 392 aaPredicted RBP19.58■□□□□ 0.72
SCAF4-206ENST00000485790 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
SCAF4-206ENST00000485790 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
SCAF4-206ENST00000485790 ARHGEF28Q8N1W1 1705 aaKnown RBP19.57■□□□□ 0.72
SCAF4-206ENST00000485790 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
SCAF4-206ENST00000485790 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
SCAF4-206ENST00000485790 TRIM37O94972 964 aa19.55■□□□□ 0.72
SCAF4-206ENST00000485790 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
SCAF4-206ENST00000485790 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 APBA3O96018 575 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
SCAF4-206ENST00000485790 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
SCAF4-206ENST00000485790 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 USP6P35125 1406 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
SCAF4-206ENST00000485790 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
SCAF4-206ENST00000485790 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
SCAF4-206ENST00000485790 EZH2Q15910 746 aaKnown RBP19.49■□□□□ 0.71
SCAF4-206ENST00000485790 NBPF14Q5TI25 921 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 TMC1Q8TDI8 760 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CAMKK2Q96RR4 588 aa19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CDCA7Q9BWT1 371 aaPredicted RBP19.48■□□□□ 0.71
SCAF4-206ENST00000485790 CAMTA1Q9Y6Y1 1673 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 BRWD3Q6RI45 1802 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 CSB-PGBD3P0DP91 1061 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
SCAF4-206ENST00000485790 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
SCAF4-206ENST00000485790 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
SCAF4-206ENST00000485790 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 SOX12O15370 315 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 DDB1Q16531 1140 aa19.46■□□□□ 0.71
SCAF4-206ENST00000485790 HDGFL2Q7Z4V5 671 aaPredicted RBP19.46■□□□□ 0.71
SCAF4-206ENST00000485790 CRB1P82279 1406 aa19.45■□□□□ 0.7
SCAF4-206ENST00000485790 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
SCAF4-206ENST00000485790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
SCAF4-206ENST00000485790 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
SCAF4-206ENST00000485790 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
SCAF4-206ENST00000485790 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
SCAF4-206ENST00000485790 DISP2A7MBM2 1401 aa19.42■□□□□ 0.7
SCAF4-206ENST00000485790 CARD10Q9BWT7 1032 aa19.42■□□□□ 0.7
SCAF4-206ENST00000485790 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
SCAF4-206ENST00000485790 EXOC5O00471 708 aa19.41■□□□□ 0.7
SCAF4-206ENST00000485790 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
SCAF4-206ENST00000485790 SLC12A5Q9H2X9 1139 aa19.4■□□□□ 0.7
SCAF4-206ENST00000485790 SBNO2Q9Y2G9 1366 aa19.4■□□□□ 0.7
SCAF4-206ENST00000485790 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms