RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 CENPJQ9HC77 1338 aaPredicted RBP30.17■■■□□ 2.42
GTF3C5-209ENST00000485692 POLR3AO14802 1390 aaPredicted RBP30.16■■■□□ 2.42
GTF3C5-209ENST00000485692 COL14A1Q05707 1796 aaKnown RBP30.16■■■□□ 2.42
GTF3C5-209ENST00000485692 CRYBG1Q9Y4K1 1723 aa30.16■■■□□ 2.42
GTF3C5-209ENST00000485692 CCDC125Q86Z20 511 aa30.15■■■□□ 2.42
GTF3C5-209ENST00000485692 PLEKHG3A1L390 1219 aa30.13■■■□□ 2.41
GTF3C5-209ENST00000485692 SIN3AQ96ST3 1273 aa30.13■■■□□ 2.41
GTF3C5-209ENST00000485692 BTG4Q9NY30 223 aa30.13■■■□□ 2.41
GTF3C5-209ENST00000485692 ACEP12821 1306 aa30.13■■■□□ 2.41
GTF3C5-209ENST00000485692 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
GTF3C5-209ENST00000485692 ONECUT3O60422 494 aaPredicted RBP30.12■■■□□ 2.41
GTF3C5-209ENST00000485692 SEPT12Q8IYM1 358 aa30.12■■■□□ 2.41
GTF3C5-209ENST00000485692 SRPK2P78362 688 aaKnown RBP30.11■■■□□ 2.41
GTF3C5-209ENST00000485692 NBPF8Q3BBV2 869 aa30.11■■■□□ 2.41
GTF3C5-209ENST00000485692 QRICH2Q9H0J4 1663 aa30.1■■■□□ 2.41
GTF3C5-209ENST00000485692 BRWD3Q6RI45 1802 aa30.09■■■□□ 2.41
GTF3C5-209ENST00000485692 NEUROD1Q13562 356 aa30.08■■■□□ 2.41
GTF3C5-209ENST00000485692 PRDM11Q9NQV5 511 aa30.08■■■□□ 2.41
GTF3C5-209ENST00000485692 TRPM1Q7Z4N2 1603 aa30.07■■■□□ 2.4
GTF3C5-209ENST00000485692 PPIP5K1Q6PFW1 1433 aa30.06■■■□□ 2.4
GTF3C5-209ENST00000485692 PHRF1Q9P1Y6 1649 aaKnown RBP30.06■■■□□ 2.4
GTF3C5-209ENST00000485692 CABP2Q9NPB3 220 aa30.04■■■□□ 2.4
GTF3C5-209ENST00000485692 BLMP54132 1417 aaPredicted RBP30.04■■■□□ 2.4
GTF3C5-209ENST00000485692 ROCK2O75116 1388 aaKnown RBP30.03■■■□□ 2.4
GTF3C5-209ENST00000485692 KIAA0232Q92628 1395 aa30.03■■■□□ 2.4
GTF3C5-209ENST00000485692 NUTM2GQ5VZR2 741 aa30.02■■■□□ 2.4
GTF3C5-209ENST00000485692 KRT27Q7Z3Y8 459 aa30.02■■■□□ 2.4
GTF3C5-209ENST00000485692 A0A0G2JS52 829 aa30.01■■■□□ 2.39
GTF3C5-209ENST00000485692 MYT1Q01538 1121 aa30.01■■■□□ 2.39
GTF3C5-209ENST00000485692 ABTB2Q8N961 1025 aa30.01■■■□□ 2.39
GTF3C5-209ENST00000485692 FAM98CQ17RN3 349 aaKnown RBP30■■■□□ 2.39
GTF3C5-209ENST00000485692 SPATA31A5Q5VU36 1347 aa29.99■■■□□ 2.39
GTF3C5-209ENST00000485692 SPATA31A7Q8IWB4 1347 aa29.99■■■□□ 2.39
GTF3C5-209ENST00000485692 BRD4O60885 1362 aaPredicted RBP29.99■■■□□ 2.39
GTF3C5-209ENST00000485692 EVC2Q86UK5 1308 aa29.98■■■□□ 2.39
GTF3C5-209ENST00000485692 ZC3H6P61129 1189 aaKnown RBP29.97■■■□□ 2.39
GTF3C5-209ENST00000485692 CHRNA2Q15822 529 aa29.96■■■□□ 2.39
GTF3C5-209ENST00000485692 NRKQ7Z2Y5 1582 aa29.95■■■□□ 2.39
GTF3C5-209ENST00000485692 SF3B2Q13435 895 aaKnown RBP29.95■■■□□ 2.39
GTF3C5-209ENST00000485692 ZRANB1Q9UGI0 708 aa29.95■■■□□ 2.39
GTF3C5-209ENST00000485692 USP19O94966 1318 aa29.95■■■□□ 2.38
GTF3C5-209ENST00000485692 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
GTF3C5-209ENST00000485692 CABP1Q9NZU7 370 aa29.94■■■□□ 2.38
GTF3C5-209ENST00000485692 CPDO75976 1380 aa29.91■■■□□ 2.38
GTF3C5-209ENST00000485692 USP6P35125 1406 aa29.91■■■□□ 2.38
GTF3C5-209ENST00000485692 SPATA31A1Q5TZJ5 1347 aa29.91■■■□□ 2.38
GTF3C5-209ENST00000485692 STRN4Q9NRL3 753 aa29.9■■■□□ 2.38
GTF3C5-209ENST00000485692 THSD7AQ9UPZ6 1657 aa29.9■■■□□ 2.38
GTF3C5-209ENST00000485692 GCP02774 474 aa29.88■■■□□ 2.37
GTF3C5-209ENST00000485692 EVA1CP58658 441 aa29.86■■■□□ 2.37
GTF3C5-209ENST00000485692 SSH2Q76I76 1423 aa29.86■■■□□ 2.37
GTF3C5-209ENST00000485692 DEFB132Q7Z7B7 95 aa29.85■■■□□ 2.37
GTF3C5-209ENST00000485692 LMO7Q8WWI1 1683 aa29.85■■■□□ 2.37
GTF3C5-209ENST00000485692 CAMTA1Q9Y6Y1 1673 aa29.85■■■□□ 2.37
GTF3C5-209ENST00000485692 SRCAPQ6ZRS2 3230 aa29.84■■■□□ 2.37
GTF3C5-209ENST00000485692 TONSLQ96HA7 1378 aa29.84■■■□□ 2.37
GTF3C5-209ENST00000485692 NLRP6P59044 892 aa29.83■■■□□ 2.37
GTF3C5-209ENST00000485692 ZNF692Q9BU19 519 aaPredicted RBP29.82■■■□□ 2.36
GTF3C5-209ENST00000485692 SBNO2Q9Y2G9 1366 aa29.81■■■□□ 2.36
GTF3C5-209ENST00000485692 CARD11Q9BXL7 1154 aa29.81■■■□□ 2.36
GTF3C5-209ENST00000485692 USP35Q9P2H5 1018 aa29.8■■■□□ 2.36
GTF3C5-209ENST00000485692 SLIT3O75094 1523 aa29.8■■■□□ 2.36
GTF3C5-209ENST00000485692 PIK3C2AO00443 1686 aa29.79■■■□□ 2.36
GTF3C5-209ENST00000485692 BAG6P46379 1132 aa29.79■■■□□ 2.36
GTF3C5-209ENST00000485692 BARGINQ6ZT62 677 aa29.79■■■□□ 2.36
GTF3C5-209ENST00000485692 LARP1Q6PKG0 1096 aaKnown RBP29.78■■■□□ 2.36
GTF3C5-209ENST00000485692 AKAP12Q02952 1782 aa29.77■■■□□ 2.36
GTF3C5-209ENST00000485692 RGPD1P0DJD0 1748 aa29.77■■■□□ 2.36
GTF3C5-209ENST00000485692 FAM182BQ5T319 152 aa29.77■■■□□ 2.36
GTF3C5-209ENST00000485692 COL5A2P05997 1499 aaPredicted RBP29.76■■■□□ 2.35
GTF3C5-209ENST00000485692 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
GTF3C5-209ENST00000485692 TCP11L2Q8N4U5 519 aa29.75■■■□□ 2.35
GTF3C5-209ENST00000485692 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
GTF3C5-209ENST00000485692 CPSF1Q10570 1443 aaKnown RBP29.74■■■□□ 2.35
GTF3C5-209ENST00000485692 THRAP3Q9Y2W1 955 aaKnown RBP29.74■■■□□ 2.35
GTF3C5-209ENST00000485692 AATKQ6ZMQ8 1374 aa29.74■■■□□ 2.35
GTF3C5-209ENST00000485692 TTC21AQ8NDW8 1320 aa29.73■■■□□ 2.35
GTF3C5-209ENST00000485692 ZBTB7CA1YPR0 619 aa29.72■■■□□ 2.35
GTF3C5-209ENST00000485692 FAM196AQ6ZSG2 479 aa29.72■■■□□ 2.35
GTF3C5-209ENST00000485692 KTN1Q86UP2 1357 aaKnown RBP29.72■■■□□ 2.35
GTF3C5-209ENST00000485692 PDE3BQ13370 1112 aa29.7■■■□□ 2.35
GTF3C5-209ENST00000485692 KCNH5Q8NCM2 988 aa29.7■■■□□ 2.35
GTF3C5-209ENST00000485692 CRB1P82279 1406 aa29.7■■■□□ 2.34
GTF3C5-209ENST00000485692 DISP2A7MBM2 1401 aa29.69■■■□□ 2.34
GTF3C5-209ENST00000485692 TNS1Q9HBL0 1735 aaKnown RBP29.68■■■□□ 2.34
GTF3C5-209ENST00000485692 MON2Q7Z3U7 1717 aa29.67■■■□□ 2.34
GTF3C5-209ENST00000485692 COL18A1P39060 1754 aa29.65■■■□□ 2.34
GTF3C5-209ENST00000485692 EN1Q05925 392 aaPredicted RBP29.65■■■□□ 2.34
GTF3C5-209ENST00000485692 PARP4Q9UKK3 1724 aaKnown RBP29.64■■■□□ 2.34
GTF3C5-209ENST00000485692 TRIM37O94972 964 aa29.63■■■□□ 2.33
GTF3C5-209ENST00000485692 ARHGEF25Q86VW2 580 aa29.63■■■□□ 2.33
GTF3C5-209ENST00000485692 TOM1L2Q6ZVM7 507 aa29.61■■■□□ 2.33
GTF3C5-209ENST00000485692 TMC1Q8TDI8 760 aa29.61■■■□□ 2.33
GTF3C5-209ENST00000485692 PUS7Q96PZ0 661 aaKnown RBP29.61■■■□□ 2.33
GTF3C5-209ENST00000485692 CD163L1Q9NR16 1453 aa29.61■■■□□ 2.33
GTF3C5-209ENST00000485692 SOX12O15370 315 aa29.6■■■□□ 2.33
GTF3C5-209ENST00000485692 HDGFL2Q7Z4V5 671 aaPredicted RBP29.6■■■□□ 2.33
GTF3C5-209ENST00000485692 AXIN2Q9Y2T1 843 aa29.6■■■□□ 2.33
GTF3C5-209ENST00000485692 WDR17Q8IZU2 1322 aa29.6■■■□□ 2.33
GTF3C5-209ENST00000485692 NFAT5O94916 1531 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms