RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
SPTA1-207ENST00000485680 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
SPTA1-207ENST00000485680 DDRGK1Q96HY6 314 aa9.41□□□□□ -0.9
SPTA1-207ENST00000485680 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
SPTA1-207ENST00000485680 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
SPTA1-207ENST00000485680 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
SPTA1-207ENST00000485680 RETREG3Q86VR2 466 aa9.37□□□□□ -0.91
SPTA1-207ENST00000485680 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
SPTA1-207ENST00000485680 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
SPTA1-207ENST00000485680 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
SPTA1-207ENST00000485680 GSK3AP49840 483 aa9.34□□□□□ -0.91
SPTA1-207ENST00000485680 NISCHQ9Y2I1 1504 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 SOBPA7XYQ1 873 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 KCNMA1Q12791 1236 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 MPNDQ8N594 471 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
SPTA1-207ENST00000485680 CCNYL3P0C7X3 344 aa9.32□□□□□ -0.92
SPTA1-207ENST00000485680 NNTQ13423 1086 aa9.32□□□□□ -0.92
SPTA1-207ENST00000485680 BAP1Q92560 729 aa9.32□□□□□ -0.92
SPTA1-207ENST00000485680 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
SPTA1-207ENST00000485680 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
SPTA1-207ENST00000485680 SCARF1Q14162 830 aa9.31□□□□□ -0.92
SPTA1-207ENST00000485680 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
SPTA1-207ENST00000485680 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
SPTA1-207ENST00000485680 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
SPTA1-207ENST00000485680 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
SPTA1-207ENST00000485680 TIMP2P16035 220 aa9.3□□□□□ -0.92
SPTA1-207ENST00000485680 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
SPTA1-207ENST00000485680 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
SPTA1-207ENST00000485680 C14orf37Q86TY3 774 aa9.29□□□□□ -0.92
SPTA1-207ENST00000485680 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
SPTA1-207ENST00000485680 FDX1P10109 184 aa9.28□□□□□ -0.92
SPTA1-207ENST00000485680 WDR4P57081 412 aaKnown RBP9.28□□□□□ -0.92
SPTA1-207ENST00000485680 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
SPTA1-207ENST00000485680 PTPRNQ16849 979 aa9.28□□□□□ -0.92
SPTA1-207ENST00000485680 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
SPTA1-207ENST00000485680 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
SPTA1-207ENST00000485680 ZNF511Q8NB15 262 aa9.27□□□□□ -0.93
SPTA1-207ENST00000485680 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
SPTA1-207ENST00000485680 ADH1CP00326 375 aa9.26□□□□□ -0.93
SPTA1-207ENST00000485680 PPFIA3O75145 1194 aa9.24□□□□□ -0.93
SPTA1-207ENST00000485680 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
SPTA1-207ENST00000485680 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
SPTA1-207ENST00000485680 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
SPTA1-207ENST00000485680 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
SPTA1-207ENST00000485680 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
SPTA1-207ENST00000485680 SKIV2LQ15477 1246 aaKnown RBP9.22□□□□□ -0.93
SPTA1-207ENST00000485680 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
SPTA1-207ENST00000485680 TMEM151AQ8N4L1 468 aa9.22□□□□□ -0.93
SPTA1-207ENST00000485680 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
SPTA1-207ENST00000485680 MAN1A2O60476 641 aa9.21□□□□□ -0.94
SPTA1-207ENST00000485680 CDK15Q96Q40 435 aa9.21□□□□□ -0.94
SPTA1-207ENST00000485680 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
SPTA1-207ENST00000485680 NDUFV2P19404 249 aa9.2□□□□□ -0.94
SPTA1-207ENST00000485680 RASSF7Q02833 373 aa9.2□□□□□ -0.94
SPTA1-207ENST00000485680 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
SPTA1-207ENST00000485680 PRR7Q8TB68 274 aa9.2□□□□□ -0.94
SPTA1-207ENST00000485680 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
SPTA1-207ENST00000485680 GDF11O95390 407 aa9.19□□□□□ -0.94
SPTA1-207ENST00000485680 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
SPTA1-207ENST00000485680 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
SPTA1-207ENST00000485680 FAM174AQ8TBP5 190 aa9.19□□□□□ -0.94
SPTA1-207ENST00000485680 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
SPTA1-207ENST00000485680 CLK2P49760 499 aaKnown RBP9.18□□□□□ -0.94
SPTA1-207ENST00000485680 KRT76Q01546 638 aa9.18□□□□□ -0.94
SPTA1-207ENST00000485680 ITPKCQ96DU7 683 aa9.18□□□□□ -0.94
SPTA1-207ENST00000485680 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
SPTA1-207ENST00000485680 NR3C2P08235 984 aa9.17□□□□□ -0.94
SPTA1-207ENST00000485680 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
SPTA1-207ENST00000485680 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
SPTA1-207ENST00000485680 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
SPTA1-207ENST00000485680 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
SPTA1-207ENST00000485680 FOXJ1Q92949 421 aa9.16□□□□□ -0.94
SPTA1-207ENST00000485680 GRM5P41594 1212 aa9.15□□□□□ -0.94
SPTA1-207ENST00000485680 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
SPTA1-207ENST00000485680 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPTA1-207ENST00000485680 SOS2Q07890 1332 aaPredicted RBP9.14□□□□□ -0.95
SPTA1-207ENST00000485680 SPDYE5A6NIY4 337 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 BMP2P12643 396 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 NR5A1Q13285 461 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 MTMR2Q13614 643 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 DIXDC1Q155Q3 683 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
SPTA1-207ENST00000485680 CTHP32929 405 aa9.13□□□□□ -0.95
SPTA1-207ENST00000485680 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
SPTA1-207ENST00000485680 CNTNAP3BQ96NU0 1288 aa9.13□□□□□ -0.95
SPTA1-207ENST00000485680 CNTNAP3Q9BZ76 1288 aa9.13□□□□□ -0.95
SPTA1-207ENST00000485680 DNMT3LQ9UJW3 386 aa9.13□□□□□ -0.95
SPTA1-207ENST00000485680 SPTLC1O15269 473 aa9.12□□□□□ -0.95
SPTA1-207ENST00000485680 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
SPTA1-207ENST00000485680 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
SPTA1-207ENST00000485680 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
SPTA1-207ENST00000485680 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
SPTA1-207ENST00000485680 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
SPTA1-207ENST00000485680 RNF225M0QZC1 329 aaPredicted RBP9.1□□□□□ -0.95
SPTA1-207ENST00000485680 UPP2O95045 317 aa9.1□□□□□ -0.95
SPTA1-207ENST00000485680 F12P00748 615 aaPredicted RBP9.09□□□□□ -0.95
SPTA1-207ENST00000485680 QPCTQ16769 361 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms