RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-215ENST00000485550 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
HMGN1-215ENST00000485550 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
HMGN1-215ENST00000485550 COL14A1Q05707 1796 aaKnown RBP15.62■□□□□ 0.09
HMGN1-215ENST00000485550 BTG4Q9NY30 223 aa15.62■□□□□ 0.09
HMGN1-215ENST00000485550 ARHGEF10O15013 1369 aa15.62■□□□□ 0.09
HMGN1-215ENST00000485550 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
HMGN1-215ENST00000485550 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
HMGN1-215ENST00000485550 EZH2Q15910 746 aaKnown RBP15.6■□□□□ 0.09
HMGN1-215ENST00000485550 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
HMGN1-215ENST00000485550 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
HMGN1-215ENST00000485550 RAB3GAP2Q9H2M9 1393 aa15.6■□□□□ 0.09
HMGN1-215ENST00000485550 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
HMGN1-215ENST00000485550 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
HMGN1-215ENST00000485550 CRYBG1Q9Y4K1 1723 aa15.58■□□□□ 0.08
HMGN1-215ENST00000485550 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.08
HMGN1-215ENST00000485550 DISP2A7MBM2 1401 aa15.57■□□□□ 0.08
HMGN1-215ENST00000485550 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
HMGN1-215ENST00000485550 YY1P25490 414 aa15.56■□□□□ 0.08
HMGN1-215ENST00000485550 C14orf93Q9H972 538 aaKnown RBP15.56■□□□□ 0.08
HMGN1-215ENST00000485550 NUP188Q5SRE5 1749 aa15.55■□□□□ 0.08
HMGN1-215ENST00000485550 RREB1Q92766 1687 aa15.55■□□□□ 0.08
HMGN1-215ENST00000485550 SPATA31A5Q5VU36 1347 aa15.55■□□□□ 0.08
HMGN1-215ENST00000485550 SPATA31A7Q8IWB4 1347 aa15.55■□□□□ 0.08
HMGN1-215ENST00000485550 TRIM37O94972 964 aa15.54■□□□□ 0.08
HMGN1-215ENST00000485550 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
HMGN1-215ENST00000485550 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
HMGN1-215ENST00000485550 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
HMGN1-215ENST00000485550 CAMKK2Q96RR4 588 aa15.53■□□□□ 0.08
HMGN1-215ENST00000485550 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
HMGN1-215ENST00000485550 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
HMGN1-215ENST00000485550 APBA3O96018 575 aa15.5■□□□□ 0.07
HMGN1-215ENST00000485550 DCAF11Q8TEB1 546 aa15.5■□□□□ 0.07
HMGN1-215ENST00000485550 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
HMGN1-215ENST00000485550 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
HMGN1-215ENST00000485550 POGKQ9P215 609 aa15.5■□□□□ 0.07
HMGN1-215ENST00000485550 GPRASP1Q5JY77 1395 aa15.49■□□□□ 0.07
HMGN1-215ENST00000485550 FAM196AQ6ZSG2 479 aa15.49■□□□□ 0.07
HMGN1-215ENST00000485550 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
HMGN1-215ENST00000485550 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
HMGN1-215ENST00000485550 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-215ENST00000485550 STRN4Q9NRL3 753 aa15.48■□□□□ 0.07
HMGN1-215ENST00000485550 TRAK1Q9UPV9 953 aa15.48■□□□□ 0.07
HMGN1-215ENST00000485550 DLC1Q96QB1 1528 aa15.48■□□□□ 0.07
HMGN1-215ENST00000485550 SPATA31A1Q5TZJ5 1347 aa15.47■□□□□ 0.07
HMGN1-215ENST00000485550 PRR36Q9H6K5 1346 aa15.47■□□□□ 0.07
HMGN1-215ENST00000485550 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
HMGN1-215ENST00000485550 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-215ENST00000485550 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
HMGN1-215ENST00000485550 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
HMGN1-215ENST00000485550 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
HMGN1-215ENST00000485550 PPP1R1BQ9UD71 204 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-215ENST00000485550 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
HMGN1-215ENST00000485550 KIAA0232Q92628 1395 aa15.45■□□□□ 0.06
HMGN1-215ENST00000485550 NGDNQ8NEJ9 315 aaKnown RBP15.44■□□□□ 0.06
HMGN1-215ENST00000485550 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
HMGN1-215ENST00000485550 ZC3H6P61129 1189 aaKnown RBP15.43■□□□□ 0.06
HMGN1-215ENST00000485550 NBPF8Q3BBV2 869 aa15.43■□□□□ 0.06
HMGN1-215ENST00000485550 NBPF14Q5TI25 921 aa15.43■□□□□ 0.06
HMGN1-215ENST00000485550 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
HMGN1-215ENST00000485550 ABCB7O75027 752 aa15.41■□□□□ 0.06
HMGN1-215ENST00000485550 PDE3BQ13370 1112 aa15.41■□□□□ 0.06
HMGN1-215ENST00000485550 NUTM2GQ5VZR2 741 aa15.41■□□□□ 0.06
HMGN1-215ENST00000485550 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
HMGN1-215ENST00000485550 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
HMGN1-215ENST00000485550 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-215ENST00000485550 KCNQ2O43526 872 aa15.4■□□□□ 0.06
HMGN1-215ENST00000485550 CHD4Q14839 1912 aa15.39■□□□□ 0.05
HMGN1-215ENST00000485550 EVA1CP58658 441 aa15.39■□□□□ 0.05
HMGN1-215ENST00000485550 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-215ENST00000485550 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
HMGN1-215ENST00000485550 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
HMGN1-215ENST00000485550 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
HMGN1-215ENST00000485550 BARGINQ6ZT62 677 aa15.38■□□□□ 0.05
HMGN1-215ENST00000485550 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
HMGN1-215ENST00000485550 NRKQ7Z2Y5 1582 aa15.37■□□□□ 0.05
HMGN1-215ENST00000485550 CASZ1Q86V15 1759 aa15.37■□□□□ 0.05
HMGN1-215ENST00000485550 LARP1Q6PKG0 1096 aaKnown RBP15.37■□□□□ 0.05
HMGN1-215ENST00000485550 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
HMGN1-215ENST00000485550 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
HMGN1-215ENST00000485550 ATP7BP35670 1465 aa15.36■□□□□ 0.05
HMGN1-215ENST00000485550 RGPD3A6NKT7 1758 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-215ENST00000485550 RGPD4Q7Z3J3 1758 aa15.36■□□□□ 0.05
HMGN1-215ENST00000485550 TCP11L2Q8N4U5 519 aa15.35■□□□□ 0.05
HMGN1-215ENST00000485550 MYOM1P52179 1685 aa15.35■□□□□ 0.05
HMGN1-215ENST00000485550 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
HMGN1-215ENST00000485550 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
HMGN1-215ENST00000485550 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-215ENST00000485550 NUDT16Q96DE0 195 aaKnown RBP15.33■□□□□ 0.04
HMGN1-215ENST00000485550 AKAP12Q02952 1782 aa15.32■□□□□ 0.04
HMGN1-215ENST00000485550 NBPF1Q3BBV0 1214 aa15.32■□□□□ 0.04
HMGN1-215ENST00000485550 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-215ENST00000485550 WNK3Q9BYP7 1800 aa15.31■□□□□ 0.04
HMGN1-215ENST00000485550 PDGFDQ9GZP0 370 aaPredicted RBP15.31■□□□□ 0.04
HMGN1-215ENST00000485550 LRRC37A3O60309 1634 aa15.31■□□□□ 0.04
HMGN1-215ENST00000485550 KAT6BQ8WYB5 2073 aa15.31■□□□□ 0.04
HMGN1-215ENST00000485550 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
HMGN1-215ENST00000485550 CDK19Q9BWU1 502 aa15.3■□□□□ 0.04
HMGN1-215ENST00000485550 OVOS2A0A0G2JMS6 1433 aa15.29■□□□□ 0.04
HMGN1-215ENST00000485550 OVOS2A0A0J9YW53 1432 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms