RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 VPS72Q15906 364 aa19.38■□□□□ 0.69
UBA3-210ENST00000485424 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
UBA3-210ENST00000485424 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
UBA3-210ENST00000485424 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
UBA3-210ENST00000485424 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
UBA3-210ENST00000485424 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
UBA3-210ENST00000485424 ATP7BP35670 1465 aa19.36■□□□□ 0.69
UBA3-210ENST00000485424 MINK1Q8N4C8 1332 aaPredicted RBP19.36■□□□□ 0.69
UBA3-210ENST00000485424 PRR36Q9H6K5 1346 aa19.36■□□□□ 0.69
UBA3-210ENST00000485424 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
UBA3-210ENST00000485424 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
UBA3-210ENST00000485424 HRCP23327 699 aa19.34■□□□□ 0.69
UBA3-210ENST00000485424 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
UBA3-210ENST00000485424 CCDC9Q9Y3X0 531 aaKnown RBP19.33■□□□□ 0.68
UBA3-210ENST00000485424 QRICH2Q9H0J4 1663 aa19.33■□□□□ 0.68
UBA3-210ENST00000485424 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
UBA3-210ENST00000485424 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
UBA3-210ENST00000485424 STAC3Q96MF2 364 aa19.32■□□□□ 0.68
UBA3-210ENST00000485424 NRKQ7Z2Y5 1582 aa19.31■□□□□ 0.68
UBA3-210ENST00000485424 WASLO00401 505 aaPredicted RBP19.3■□□□□ 0.68
UBA3-210ENST00000485424 DEFB132Q7Z7B7 95 aa19.3■□□□□ 0.68
UBA3-210ENST00000485424 KRT27Q7Z3Y8 459 aa19.28■□□□□ 0.68
UBA3-210ENST00000485424 BTG4Q9NY30 223 aa19.28■□□□□ 0.68
UBA3-210ENST00000485424 LMO7Q8WWI1 1683 aa19.27■□□□□ 0.68
UBA3-210ENST00000485424 WNK3Q9BYP7 1800 aa19.27■□□□□ 0.68
UBA3-210ENST00000485424 SF3B2Q13435 895 aaKnown RBP19.26■□□□□ 0.67
UBA3-210ENST00000485424 RREB1Q92766 1687 aa19.26■□□□□ 0.67
UBA3-210ENST00000485424 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
UBA3-210ENST00000485424 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
UBA3-210ENST00000485424 A0A0G2JS52 829 aa19.24■□□□□ 0.67
UBA3-210ENST00000485424 MYT1Q01538 1121 aa19.24■□□□□ 0.67
UBA3-210ENST00000485424 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
UBA3-210ENST00000485424 SBF2Q86WG5 1849 aa19.23■□□□□ 0.67
UBA3-210ENST00000485424 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
UBA3-210ENST00000485424 SPATA31A5Q5VU36 1347 aa19.23■□□□□ 0.67
UBA3-210ENST00000485424 SPATA31A7Q8IWB4 1347 aa19.23■□□□□ 0.67
UBA3-210ENST00000485424 NUP188Q5SRE5 1749 aa19.22■□□□□ 0.67
UBA3-210ENST00000485424 PARP4Q9UKK3 1724 aaKnown RBP19.22■□□□□ 0.67
UBA3-210ENST00000485424 RGPD5Q99666 1765 aa19.22■□□□□ 0.67
UBA3-210ENST00000485424 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
UBA3-210ENST00000485424 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
UBA3-210ENST00000485424 AKAP12Q02952 1782 aa19.21■□□□□ 0.67
UBA3-210ENST00000485424 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
UBA3-210ENST00000485424 KIAA0232Q92628 1395 aa19.2■□□□□ 0.66
UBA3-210ENST00000485424 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
UBA3-210ENST00000485424 TRPM1Q7Z4N2 1603 aa19.19■□□□□ 0.66
UBA3-210ENST00000485424 DISP2A7MBM2 1401 aa19.18■□□□□ 0.66
UBA3-210ENST00000485424 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
UBA3-210ENST00000485424 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
UBA3-210ENST00000485424 BAG6P46379 1132 aa19.17■□□□□ 0.66
UBA3-210ENST00000485424 CAMTA1Q9Y6Y1 1673 aa19.17■□□□□ 0.66
UBA3-210ENST00000485424 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
UBA3-210ENST00000485424 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
UBA3-210ENST00000485424 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
UBA3-210ENST00000485424 RGPD3A6NKT7 1758 aaPredicted RBP19.15■□□□□ 0.66
UBA3-210ENST00000485424 COL18A1P39060 1754 aa19.15■□□□□ 0.66
UBA3-210ENST00000485424 RGPD4Q7Z3J3 1758 aa19.15■□□□□ 0.66
UBA3-210ENST00000485424 ACEP12821 1306 aa19.15■□□□□ 0.66
UBA3-210ENST00000485424 CHRNA2Q15822 529 aa19.14■□□□□ 0.65
UBA3-210ENST00000485424 SSH2Q76I76 1423 aa19.14■□□□□ 0.65
UBA3-210ENST00000485424 LRRC37A3O60309 1634 aa19.14■□□□□ 0.65
UBA3-210ENST00000485424 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
UBA3-210ENST00000485424 PEAK1Q9H792 1746 aa19.13■□□□□ 0.65
UBA3-210ENST00000485424 PPIP5K1Q6PFW1 1433 aa19.12■□□□□ 0.65
UBA3-210ENST00000485424 PSDA5PKW4 1024 aaPredicted RBP19.12■□□□□ 0.65
UBA3-210ENST00000485424 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
UBA3-210ENST00000485424 EN1Q05925 392 aaPredicted RBP19.11■□□□□ 0.65
UBA3-210ENST00000485424 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
UBA3-210ENST00000485424 CCDC61Q9Y6R9 512 aa19.11■□□□□ 0.65
UBA3-210ENST00000485424 CPDO75976 1380 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 USP19O94966 1318 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 SLIT3O75094 1523 aa19.1■□□□□ 0.65
UBA3-210ENST00000485424 MON2Q7Z3U7 1717 aa19.09■□□□□ 0.65
UBA3-210ENST00000485424 COL5A2P05997 1499 aaPredicted RBP19.08■□□□□ 0.64
UBA3-210ENST00000485424 LTN1O94822 1766 aa19.06■□□□□ 0.64
UBA3-210ENST00000485424 CENPJQ9HC77 1338 aaPredicted RBP19.06■□□□□ 0.64
UBA3-210ENST00000485424 ABTB2Q8N961 1025 aa19.06■□□□□ 0.64
UBA3-210ENST00000485424 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
UBA3-210ENST00000485424 SRPK2P78362 688 aaKnown RBP19.05■□□□□ 0.64
UBA3-210ENST00000485424 USP6P35125 1406 aa19.05■□□□□ 0.64
UBA3-210ENST00000485424 USP54Q70EL1 1684 aa19.05■□□□□ 0.64
UBA3-210ENST00000485424 TRIM37O94972 964 aa19.04■□□□□ 0.64
UBA3-210ENST00000485424 EZH2Q15910 746 aaKnown RBP19.04■□□□□ 0.64
UBA3-210ENST00000485424 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
UBA3-210ENST00000485424 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
UBA3-210ENST00000485424 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
UBA3-210ENST00000485424 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
UBA3-210ENST00000485424 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
UBA3-210ENST00000485424 EVA1CP58658 441 aa19.02■□□□□ 0.64
UBA3-210ENST00000485424 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.64
UBA3-210ENST00000485424 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
UBA3-210ENST00000485424 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
UBA3-210ENST00000485424 CAMKK2Q96RR4 588 aa19.01■□□□□ 0.63
UBA3-210ENST00000485424 CRB1P82279 1406 aa19■□□□□ 0.63
UBA3-210ENST00000485424 GCP02774 474 aa19■□□□□ 0.63
UBA3-210ENST00000485424 NLRP13Q86W25 1043 aa19■□□□□ 0.63
UBA3-210ENST00000485424 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms