RNA–Protein interactions for RNA: ENST00000485238.3

RN7SL38P-201, Transcript of RNA, 7SL, cytoplasmic 38, pseudogene, humanhuman

BASIC

Gene RN7SL38P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL38P-201ENST00000485238 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
RN7SL38P-201ENST00000485238 BLMP54132 1417 aaPredicted RBP13.98□□□□□ -0.17
RN7SL38P-201ENST00000485238 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
RN7SL38P-201ENST00000485238 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
RN7SL38P-201ENST00000485238 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
RN7SL38P-201ENST00000485238 TRPM3Q9HCF6 1732 aaPredicted RBP13.96□□□□□ -0.17
RN7SL38P-201ENST00000485238 SF3B2Q13435 895 aaKnown RBP13.96□□□□□ -0.17
RN7SL38P-201ENST00000485238 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.17
RN7SL38P-201ENST00000485238 ACEP12821 1306 aa13.95□□□□□ -0.18
RN7SL38P-201ENST00000485238 ATP7BP35670 1465 aa13.95□□□□□ -0.18
RN7SL38P-201ENST00000485238 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
RN7SL38P-201ENST00000485238 SPATA31A5Q5VU36 1347 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 SPATA31A7Q8IWB4 1347 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 PLEKHG3A1L390 1219 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 ALS2Q96Q42 1657 aa13.94□□□□□ -0.18
RN7SL38P-201ENST00000485238 BRWD3Q6RI45 1802 aa13.93□□□□□ -0.18
RN7SL38P-201ENST00000485238 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
RN7SL38P-201ENST00000485238 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
RN7SL38P-201ENST00000485238 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
RN7SL38P-201ENST00000485238 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
RN7SL38P-201ENST00000485238 ABTB2Q8N961 1025 aa13.91□□□□□ -0.18
RN7SL38P-201ENST00000485238 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
RN7SL38P-201ENST00000485238 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
RN7SL38P-201ENST00000485238 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
RN7SL38P-201ENST00000485238 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
RN7SL38P-201ENST00000485238 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
RN7SL38P-201ENST00000485238 BAG6P46379 1132 aa13.89□□□□□ -0.19
RN7SL38P-201ENST00000485238 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
RN7SL38P-201ENST00000485238 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
RN7SL38P-201ENST00000485238 NRAPQ86VF7 1730 aa13.88□□□□□ -0.19
RN7SL38P-201ENST00000485238 EVA1CP58658 441 aa13.88□□□□□ -0.19
RN7SL38P-201ENST00000485238 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
RN7SL38P-201ENST00000485238 CABP1Q9NZU7 370 aa13.88□□□□□ -0.19
RN7SL38P-201ENST00000485238 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
RN7SL38P-201ENST00000485238 GCP02774 474 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 PPIP5K1Q6PFW1 1433 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 KIAA1210Q9ULL0 1709 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 CRYBG1Q9Y4K1 1723 aa13.86□□□□□ -0.19
RN7SL38P-201ENST00000485238 ITSN1Q15811 1721 aa13.85□□□□□ -0.19
RN7SL38P-201ENST00000485238 PSDA5PKW4 1024 aaPredicted RBP13.85□□□□□ -0.19
RN7SL38P-201ENST00000485238 LARP1Q6PKG0 1096 aaKnown RBP13.85□□□□□ -0.19
RN7SL38P-201ENST00000485238 USP19O94966 1318 aa13.85□□□□□ -0.19
RN7SL38P-201ENST00000485238 TRIM37O94972 964 aa13.83□□□□□ -0.2
RN7SL38P-201ENST00000485238 NLRP6P59044 892 aa13.83□□□□□ -0.2
RN7SL38P-201ENST00000485238 FAM196AQ6ZSG2 479 aa13.83□□□□□ -0.2
RN7SL38P-201ENST00000485238 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
RN7SL38P-201ENST00000485238 CPDO75976 1380 aa13.83□□□□□ -0.2
RN7SL38P-201ENST00000485238 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 PDE3BQ13370 1112 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 EZH2Q15910 746 aaKnown RBP13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
RN7SL38P-201ENST00000485238 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
RN7SL38P-201ENST00000485238 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
RN7SL38P-201ENST00000485238 PHRF1Q9P1Y6 1649 aaKnown RBP13.8□□□□□ -0.2
RN7SL38P-201ENST00000485238 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
RN7SL38P-201ENST00000485238 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
RN7SL38P-201ENST00000485238 BRD4O60885 1362 aaPredicted RBP13.8□□□□□ -0.2
RN7SL38P-201ENST00000485238 APBA3O96018 575 aa13.79□□□□□ -0.2
RN7SL38P-201ENST00000485238 USP6P35125 1406 aa13.79□□□□□ -0.2
RN7SL38P-201ENST00000485238 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
RN7SL38P-201ENST00000485238 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
RN7SL38P-201ENST00000485238 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
RN7SL38P-201ENST00000485238 DISP2A7MBM2 1401 aa13.77□□□□□ -0.21
RN7SL38P-201ENST00000485238 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
RN7SL38P-201ENST00000485238 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
RN7SL38P-201ENST00000485238 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
RN7SL38P-201ENST00000485238 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
RN7SL38P-201ENST00000485238 COL5A2P05997 1499 aaPredicted RBP13.75□□□□□ -0.21
RN7SL38P-201ENST00000485238 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
RN7SL38P-201ENST00000485238 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
RN7SL38P-201ENST00000485238 CRB1P82279 1406 aa13.74□□□□□ -0.21
RN7SL38P-201ENST00000485238 RGPD1P0DJD0 1748 aa13.74□□□□□ -0.21
RN7SL38P-201ENST00000485238 SOX12O15370 315 aa13.74□□□□□ -0.21
RN7SL38P-201ENST00000485238 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
RN7SL38P-201ENST00000485238 ARHGEF25Q86VW2 580 aa13.74□□□□□ -0.21
RN7SL38P-201ENST00000485238 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
RN7SL38P-201ENST00000485238 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
RN7SL38P-201ENST00000485238 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
RN7SL38P-201ENST00000485238 SLIT3O75094 1523 aa13.71□□□□□ -0.21
RN7SL38P-201ENST00000485238 DDB1Q16531 1140 aa13.71□□□□□ -0.21
RN7SL38P-201ENST00000485238 CPSF1Q10570 1443 aaKnown RBP13.71□□□□□ -0.22
RN7SL38P-201ENST00000485238 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
RN7SL38P-201ENST00000485238 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.22
RN7SL38P-201ENST00000485238 TNS1Q9HBL0 1735 aaKnown RBP13.7□□□□□ -0.22
RN7SL38P-201ENST00000485238 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
RN7SL38P-201ENST00000485238 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
RN7SL38P-201ENST00000485238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
RN7SL38P-201ENST00000485238 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
RN7SL38P-201ENST00000485238 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
RN7SL38P-201ENST00000485238 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms