RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 ATAD2Q6PL18 1390 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 VPS72Q15906 364 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 RGS12O14924 1447 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 PPIP5K1Q6PFW1 1433 aa19.76■□□□□ 0.75
LDLRAP1-205ENST00000484476 A0A0G2JS52 829 aa19.75■□□□□ 0.75
LDLRAP1-205ENST00000484476 MYT1Q01538 1121 aa19.75■□□□□ 0.75
LDLRAP1-205ENST00000484476 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
LDLRAP1-205ENST00000484476 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
LDLRAP1-205ENST00000484476 SLIT2O94813 1529 aa19.74■□□□□ 0.75
LDLRAP1-205ENST00000484476 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
LDLRAP1-205ENST00000484476 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
LDLRAP1-205ENST00000484476 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
LDLRAP1-205ENST00000484476 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
LDLRAP1-205ENST00000484476 EVA1CP58658 441 aa19.71■□□□□ 0.75
LDLRAP1-205ENST00000484476 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
LDLRAP1-205ENST00000484476 TRPM1Q7Z4N2 1603 aa19.7■□□□□ 0.74
LDLRAP1-205ENST00000484476 ZC3H6P61129 1189 aaKnown RBP19.7■□□□□ 0.74
LDLRAP1-205ENST00000484476 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
LDLRAP1-205ENST00000484476 RALGAPBQ86X10 1494 aa19.68■□□□□ 0.74
LDLRAP1-205ENST00000484476 NLRP6P59044 892 aa19.68■□□□□ 0.74
LDLRAP1-205ENST00000484476 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
LDLRAP1-205ENST00000484476 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
LDLRAP1-205ENST00000484476 TRPM3Q9HCF6 1732 aaPredicted RBP19.68■□□□□ 0.74
LDLRAP1-205ENST00000484476 SF3B2Q13435 895 aaKnown RBP19.66■□□□□ 0.74
LDLRAP1-205ENST00000484476 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
LDLRAP1-205ENST00000484476 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
LDLRAP1-205ENST00000484476 KIAA0232Q92628 1395 aa19.66■□□□□ 0.74
LDLRAP1-205ENST00000484476 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
LDLRAP1-205ENST00000484476 CHRNA2Q15822 529 aa19.65■□□□□ 0.74
LDLRAP1-205ENST00000484476 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
LDLRAP1-205ENST00000484476 GCP02774 474 aa19.64■□□□□ 0.73
LDLRAP1-205ENST00000484476 FAM98CQ17RN3 349 aaKnown RBP19.64■□□□□ 0.73
LDLRAP1-205ENST00000484476 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
LDLRAP1-205ENST00000484476 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.63■□□□□ 0.73
LDLRAP1-205ENST00000484476 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
LDLRAP1-205ENST00000484476 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
LDLRAP1-205ENST00000484476 HDGFL2Q7Z4V5 671 aaPredicted RBP19.63■□□□□ 0.73
LDLRAP1-205ENST00000484476 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
LDLRAP1-205ENST00000484476 SBNO2Q9Y2G9 1366 aa19.62■□□□□ 0.73
LDLRAP1-205ENST00000484476 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
LDLRAP1-205ENST00000484476 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
LDLRAP1-205ENST00000484476 USP6P35125 1406 aa19.61■□□□□ 0.73
LDLRAP1-205ENST00000484476 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
LDLRAP1-205ENST00000484476 TERF2IPQ9NYB0 399 aa19.61■□□□□ 0.73
LDLRAP1-205ENST00000484476 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
LDLRAP1-205ENST00000484476 SPATA31A5Q5VU36 1347 aa19.6■□□□□ 0.73
LDLRAP1-205ENST00000484476 SPATA31A7Q8IWB4 1347 aa19.6■□□□□ 0.73
LDLRAP1-205ENST00000484476 TTC21AQ8NDW8 1320 aa19.6■□□□□ 0.73
LDLRAP1-205ENST00000484476 KCNH5Q8NCM2 988 aa19.6■□□□□ 0.73
LDLRAP1-205ENST00000484476 USP19O94966 1318 aa19.59■□□□□ 0.73
LDLRAP1-205ENST00000484476 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
LDLRAP1-205ENST00000484476 ABCA3Q99758 1704 aa19.59■□□□□ 0.73
LDLRAP1-205ENST00000484476 PLCH1Q4KWH8 1693 aa19.59■□□□□ 0.73
LDLRAP1-205ENST00000484476 TTC21BQ7Z4L5 1316 aa19.58■□□□□ 0.73
LDLRAP1-205ENST00000484476 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.72
LDLRAP1-205ENST00000484476 USP35Q9P2H5 1018 aa19.58■□□□□ 0.72
LDLRAP1-205ENST00000484476 CPDO75976 1380 aa19.57■□□□□ 0.72
LDLRAP1-205ENST00000484476 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
LDLRAP1-205ENST00000484476 GLI3P10071 1580 aa19.57■□□□□ 0.72
LDLRAP1-205ENST00000484476 SPATA31A1Q5TZJ5 1347 aa19.55■□□□□ 0.72
LDLRAP1-205ENST00000484476 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
LDLRAP1-205ENST00000484476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
LDLRAP1-205ENST00000484476 SOX12O15370 315 aa19.54■□□□□ 0.72
LDLRAP1-205ENST00000484476 TMF1P82094 1093 aa19.54■□□□□ 0.72
LDLRAP1-205ENST00000484476 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
LDLRAP1-205ENST00000484476 TCP11L2Q8N4U5 519 aa19.53■□□□□ 0.72
LDLRAP1-205ENST00000484476 SLC12A5Q9H2X9 1139 aa19.53■□□□□ 0.72
LDLRAP1-205ENST00000484476 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
LDLRAP1-205ENST00000484476 BLMP54132 1417 aaPredicted RBP19.52■□□□□ 0.72
LDLRAP1-205ENST00000484476 LARP1Q6PKG0 1096 aaKnown RBP19.52■□□□□ 0.72
LDLRAP1-205ENST00000484476 THRAP3Q9Y2W1 955 aaKnown RBP19.52■□□□□ 0.72
LDLRAP1-205ENST00000484476 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
LDLRAP1-205ENST00000484476 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
LDLRAP1-205ENST00000484476 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
LDLRAP1-205ENST00000484476 AATKQ6ZMQ8 1374 aa19.5■□□□□ 0.71
LDLRAP1-205ENST00000484476 NINLQ9Y2I6 1382 aa19.5■□□□□ 0.71
LDLRAP1-205ENST00000484476 CSB-PGBD3P0DP91 1061 aa19.5■□□□□ 0.71
LDLRAP1-205ENST00000484476 TOM1L2Q6ZVM7 507 aa19.5■□□□□ 0.71
LDLRAP1-205ENST00000484476 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
LDLRAP1-205ENST00000484476 BAG6P46379 1132 aa19.49■□□□□ 0.71
LDLRAP1-205ENST00000484476 USP47Q96K76 1375 aa19.48■□□□□ 0.71
LDLRAP1-205ENST00000484476 FAM196AQ6ZSG2 479 aa19.48■□□□□ 0.71
LDLRAP1-205ENST00000484476 TESK2Q96S53 571 aa19.48■□□□□ 0.71
LDLRAP1-205ENST00000484476 CRYBG1Q9Y4K1 1723 aa19.48■□□□□ 0.71
LDLRAP1-205ENST00000484476 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
LDLRAP1-205ENST00000484476 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
LDLRAP1-205ENST00000484476 NRAPQ86VF7 1730 aa19.47■□□□□ 0.71
LDLRAP1-205ENST00000484476 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
LDLRAP1-205ENST00000484476 NME9Q86XW9 330 aa19.45■□□□□ 0.7
LDLRAP1-205ENST00000484476 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
LDLRAP1-205ENST00000484476 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
LDLRAP1-205ENST00000484476 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
LDLRAP1-205ENST00000484476 CRB1P82279 1406 aa19.43■□□□□ 0.7
LDLRAP1-205ENST00000484476 SLIT3O75094 1523 aa19.43■□□□□ 0.7
LDLRAP1-205ENST00000484476 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
LDLRAP1-205ENST00000484476 COG3Q96JB2 828 aa19.43■□□□□ 0.7
LDLRAP1-205ENST00000484476 COL5A2P05997 1499 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms