RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 VPS72Q15906 364 aa40.87■■■■■ 4.13
HLA-C-207ENST00000484378 CCDC61Q9Y6R9 512 aa40.86■■■■■ 4.13
HLA-C-207ENST00000484378 CRYBG1Q9Y4K1 1723 aa40.86■■■■■ 4.13
HLA-C-207ENST00000484378 QRICH2Q9H0J4 1663 aa40.85■■■■■ 4.13
HLA-C-207ENST00000484378 CCDC9Q9Y3X0 531 aaKnown RBP40.85■■■■■ 4.13
HLA-C-207ENST00000484378 POLR3AO14802 1390 aaPredicted RBP40.84■■■■■ 4.13
HLA-C-207ENST00000484378 TRPM1Q7Z4N2 1603 aa40.83■■■■■ 4.13
HLA-C-207ENST00000484378 COL14A1Q05707 1796 aaKnown RBP40.83■■■■■ 4.13
HLA-C-207ENST00000484378 NRAPQ86VF7 1730 aa40.81■■■■■ 4.12
HLA-C-207ENST00000484378 SRPK2P78362 688 aaKnown RBP40.81■■■■■ 4.12
HLA-C-207ENST00000484378 ACEP12821 1306 aa40.81■■■■■ 4.12
HLA-C-207ENST00000484378 BTG4Q9NY30 223 aa40.78■■■■■ 4.12
HLA-C-207ENST00000484378 PLEKHG3A1L390 1219 aa40.77■■■■■ 4.12
HLA-C-207ENST00000484378 NBPF8Q3BBV2 869 aa40.76■■■■■ 4.12
HLA-C-207ENST00000484378 PHRF1Q9P1Y6 1649 aaKnown RBP40.75■■■■■ 4.11
HLA-C-207ENST00000484378 PPIP5K1Q6PFW1 1433 aa40.75■■■■■ 4.11
HLA-C-207ENST00000484378 BRWD3Q6RI45 1802 aa40.74■■■■■ 4.11
HLA-C-207ENST00000484378 SEPT12Q8IYM1 358 aa40.73■■■■■ 4.11
HLA-C-207ENST00000484378 CABP2Q9NPB3 220 aa40.73■■■■■ 4.11
HLA-C-207ENST00000484378 PRDM11Q9NQV5 511 aa40.73■■■■■ 4.11
HLA-C-207ENST00000484378 ROCK2O75116 1388 aaKnown RBP40.73■■■■■ 4.11
HLA-C-207ENST00000484378 NUTM2GQ5VZR2 741 aa40.7■■■■■ 4.11
HLA-C-207ENST00000484378 KIAA0232Q92628 1395 aa40.67■■■■■ 4.1
HLA-C-207ENST00000484378 CCDC125Q86Z20 511 aa40.67■■■■■ 4.1
HLA-C-207ENST00000484378 ONECUT3O60422 494 aaPredicted RBP40.66■■■■■ 4.1
HLA-C-207ENST00000484378 A0A0G2JS52 829 aa40.65■■■■■ 4.1
HLA-C-207ENST00000484378 MYT1Q01538 1121 aa40.65■■■■■ 4.1
HLA-C-207ENST00000484378 ABTB2Q8N961 1025 aa40.63■■■■■ 4.09
HLA-C-207ENST00000484378 EVC2Q86UK5 1308 aa40.62■■■■■ 4.09
HLA-C-207ENST00000484378 FAM98CQ17RN3 349 aaKnown RBP40.61■■■■■ 4.09
HLA-C-207ENST00000484378 NRKQ7Z2Y5 1582 aa40.61■■■■■ 4.09
HLA-C-207ENST00000484378 ZC3H6P61129 1189 aaKnown RBP40.6■■■■■ 4.09
HLA-C-207ENST00000484378 BLMP54132 1417 aaPredicted RBP40.59■■■■■ 4.09
HLA-C-207ENST00000484378 CHRNA2Q15822 529 aa40.59■■■■■ 4.09
HLA-C-207ENST00000484378 KRT27Q7Z3Y8 459 aa40.59■■■■■ 4.09
HLA-C-207ENST00000484378 SPATA31A5Q5VU36 1347 aa40.58■■■■■ 4.09
HLA-C-207ENST00000484378 SPATA31A7Q8IWB4 1347 aa40.58■■■■■ 4.09
HLA-C-207ENST00000484378 CABP1Q9NZU7 370 aa40.57■■■■■ 4.09
HLA-C-207ENST00000484378 BRD4O60885 1362 aaPredicted RBP40.56■■■■■ 4.08
HLA-C-207ENST00000484378 USP19O94966 1318 aa40.55■■■■■ 4.08
HLA-C-207ENST00000484378 USP6P35125 1406 aa40.54■■■■■ 4.08
HLA-C-207ENST00000484378 NLRP13Q86W25 1043 aa40.52■■■■■ 4.08
HLA-C-207ENST00000484378 TONSLQ96HA7 1378 aa40.51■■■■■ 4.08
HLA-C-207ENST00000484378 STRN4Q9NRL3 753 aa40.51■■■■■ 4.08
HLA-C-207ENST00000484378 CPDO75976 1380 aa40.48■■■■■ 4.07
HLA-C-207ENST00000484378 THSD7AQ9UPZ6 1657 aa40.48■■■■■ 4.07
HLA-C-207ENST00000484378 SF3B2Q13435 895 aaKnown RBP40.48■■■■■ 4.07
HLA-C-207ENST00000484378 TRIM26Q12899 539 aaPredicted RBP40.46■■■■■ 4.07
HLA-C-207ENST00000484378 SPATA31A1Q5TZJ5 1347 aa40.45■■■■■ 4.07
HLA-C-207ENST00000484378 GCP02774 474 aa40.44■■■■■ 4.06
HLA-C-207ENST00000484378 CARD11Q9BXL7 1154 aa40.44■■■■■ 4.06
HLA-C-207ENST00000484378 ZRANB1Q9UGI0 708 aa40.43■■■■■ 4.06
HLA-C-207ENST00000484378 LMO7Q8WWI1 1683 aa40.43■■■■■ 4.06
HLA-C-207ENST00000484378 SSH2Q76I76 1423 aa40.42■■■■■ 4.06
HLA-C-207ENST00000484378 EVA1CP58658 441 aa40.42■■■■■ 4.06
HLA-C-207ENST00000484378 CAMTA1Q9Y6Y1 1673 aa40.42■■■■■ 4.06
HLA-C-207ENST00000484378 NLRP6P59044 892 aa40.4■■■■■ 4.06
HLA-C-207ENST00000484378 PIK3C2AO00443 1686 aa40.4■■■■■ 4.06
HLA-C-207ENST00000484378 SBNO2Q9Y2G9 1366 aa40.39■■■■■ 4.06
HLA-C-207ENST00000484378 DEFB132Q7Z7B7 95 aa40.39■■■■■ 4.06
HLA-C-207ENST00000484378 AKAP12Q02952 1782 aa40.38■■■■■ 4.05
HLA-C-207ENST00000484378 SLIT3O75094 1523 aa40.37■■■■■ 4.05
HLA-C-207ENST00000484378 USP35Q9P2H5 1018 aa40.36■■■■■ 4.05
HLA-C-207ENST00000484378 ZNF692Q9BU19 519 aaPredicted RBP40.35■■■■■ 4.05
HLA-C-207ENST00000484378 SRCAPQ6ZRS2 3230 aa40.34■■■■■ 4.05
HLA-C-207ENST00000484378 FAM182BQ5T319 152 aa40.33■■■■■ 4.05
HLA-C-207ENST00000484378 ZBTB7CA1YPR0 619 aa40.32■■■■■ 4.05
HLA-C-207ENST00000484378 LARP1Q6PKG0 1096 aaKnown RBP40.32■■■■■ 4.05
HLA-C-207ENST00000484378 TTC21BQ7Z4L5 1316 aa40.3■■■■■ 4.04
HLA-C-207ENST00000484378 COL5A2P05997 1499 aaPredicted RBP40.3■■■■■ 4.04
HLA-C-207ENST00000484378 RGPD1P0DJD0 1748 aa40.29■■■■■ 4.04
HLA-C-207ENST00000484378 CPSF1Q10570 1443 aaKnown RBP40.29■■■■■ 4.04
HLA-C-207ENST00000484378 KTN1Q86UP2 1357 aaKnown RBP40.27■■■■■ 4.04
HLA-C-207ENST00000484378 BAG6P46379 1132 aa40.27■■■■■ 4.04
HLA-C-207ENST00000484378 BARGINQ6ZT62 677 aa40.27■■■■■ 4.04
HLA-C-207ENST00000484378 TTC21AQ8NDW8 1320 aa40.26■■■■■ 4.04
HLA-C-207ENST00000484378 AATKQ6ZMQ8 1374 aa40.25■■■■■ 4.03
HLA-C-207ENST00000484378 TCP11L2Q8N4U5 519 aa40.25■■■■■ 4.03
HLA-C-207ENST00000484378 MON2Q7Z3U7 1717 aa40.24■■■■■ 4.03
HLA-C-207ENST00000484378 CRB1P82279 1406 aa40.2■■■■■ 4.03
HLA-C-207ENST00000484378 THRAP3Q9Y2W1 955 aaKnown RBP40.19■■■■■ 4.02
HLA-C-207ENST00000484378 KCNH5Q8NCM2 988 aa40.18■■■■■ 4.02
HLA-C-207ENST00000484378 TNS1Q9HBL0 1735 aaKnown RBP40.18■■■■■ 4.02
HLA-C-207ENST00000484378 SOX12O15370 315 aa40.17■■■■■ 4.02
HLA-C-207ENST00000484378 PDE3BQ13370 1112 aa40.17■■■■■ 4.02
HLA-C-207ENST00000484378 FAM196AQ6ZSG2 479 aa40.17■■■■■ 4.02
HLA-C-207ENST00000484378 TMC1Q8TDI8 760 aa40.17■■■■■ 4.02
HLA-C-207ENST00000484378 COL18A1P39060 1754 aa40.17■■■■■ 4.02
HLA-C-207ENST00000484378 CD163L1Q9NR16 1453 aa40.14■■■■■ 4.02
HLA-C-207ENST00000484378 PARP4Q9UKK3 1724 aaKnown RBP40.13■■■■■ 4.01
HLA-C-207ENST00000484378 ARHGEF25Q86VW2 580 aa40.12■■■■■ 4.01
HLA-C-207ENST00000484378 NFAT5O94916 1531 aa40.11■■■■■ 4.01
HLA-C-207ENST00000484378 DISP2A7MBM2 1401 aa40.11■■■■■ 4.01
HLA-C-207ENST00000484378 EN1Q05925 392 aaPredicted RBP40.11■■■■■ 4.01
HLA-C-207ENST00000484378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.11■■■■■ 4.01
HLA-C-207ENST00000484378 HDGFL2Q7Z4V5 671 aaPredicted RBP40.1■■■■■ 4.01
HLA-C-207ENST00000484378 TRIM37O94972 964 aa40.09■■■■■ 4.01
HLA-C-207ENST00000484378 TOM1L2Q6ZVM7 507 aa40.09■■■■■ 4.01
HLA-C-207ENST00000484378 SLC12A5Q9H2X9 1139 aa40.08■■■■■ 4.01
HLA-C-207ENST00000484378 AXIN2Q9Y2T1 843 aa40.08■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms