RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PRDM11Q9NQV5 511 aa14.52□□□□□ -0.09
CPSF4-213ENST00000484112 DLC1Q96QB1 1528 aa14.51□□□□□ -0.09
CPSF4-213ENST00000484112 WASLO00401 505 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-213ENST00000484112 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
CPSF4-213ENST00000484112 SPATA31A5Q5VU36 1347 aa14.5□□□□□ -0.09
CPSF4-213ENST00000484112 SPATA31A7Q8IWB4 1347 aa14.5□□□□□ -0.09
CPSF4-213ENST00000484112 R3HDM1Q15032 1099 aaKnown RBP14.5□□□□□ -0.09
CPSF4-213ENST00000484112 STRN4Q9NRL3 753 aa14.5□□□□□ -0.09
CPSF4-213ENST00000484112 EIF3AQ14152 1382 aaKnown RBP14.49□□□□□ -0.09
CPSF4-213ENST00000484112 COL14A1Q05707 1796 aaKnown RBP14.48□□□□□ -0.09
CPSF4-213ENST00000484112 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
CPSF4-213ENST00000484112 EZH2Q15910 746 aaKnown RBP14.48□□□□□ -0.09
CPSF4-213ENST00000484112 NUTM2GQ5VZR2 741 aa14.48□□□□□ -0.09
CPSF4-213ENST00000484112 NRAPQ86VF7 1730 aa14.48□□□□□ -0.09
CPSF4-213ENST00000484112 TRPM3Q9HCF6 1732 aaPredicted RBP14.48□□□□□ -0.09
CPSF4-213ENST00000484112 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
CPSF4-213ENST00000484112 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
CPSF4-213ENST00000484112 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
CPSF4-213ENST00000484112 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
CPSF4-213ENST00000484112 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.09
CPSF4-213ENST00000484112 LRP5O75197 1615 aa14.46□□□□□ -0.09
CPSF4-213ENST00000484112 TRIM37O94972 964 aa14.46□□□□□ -0.09
CPSF4-213ENST00000484112 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
CPSF4-213ENST00000484112 KIAA0232Q92628 1395 aa14.46□□□□□ -0.1
CPSF4-213ENST00000484112 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
CPSF4-213ENST00000484112 EVA1CP58658 441 aa14.45□□□□□ -0.1
CPSF4-213ENST00000484112 SPATA31A1Q5TZJ5 1347 aa14.44□□□□□ -0.1
CPSF4-213ENST00000484112 FAM196AQ6ZSG2 479 aa14.44□□□□□ -0.1
CPSF4-213ENST00000484112 APBA3O96018 575 aa14.43□□□□□ -0.1
CPSF4-213ENST00000484112 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
CPSF4-213ENST00000484112 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
CPSF4-213ENST00000484112 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
CPSF4-213ENST00000484112 CAMKK2Q96RR4 588 aa14.42□□□□□ -0.1
CPSF4-213ENST00000484112 THSD7AQ9UPZ6 1657 aa14.4□□□□□ -0.1
CPSF4-213ENST00000484112 NBPF8Q3BBV2 869 aa14.4□□□□□ -0.1
CPSF4-213ENST00000484112 DISP2A7MBM2 1401 aa14.4□□□□□ -0.1
CPSF4-213ENST00000484112 ACEP12821 1306 aa14.4□□□□□ -0.1
CPSF4-213ENST00000484112 ABTB2Q8N961 1025 aa14.39□□□□□ -0.11
CPSF4-213ENST00000484112 ATP7BP35670 1465 aa14.38□□□□□ -0.11
CPSF4-213ENST00000484112 CRYBG1Q9Y4K1 1723 aa14.38□□□□□ -0.11
CPSF4-213ENST00000484112 LARP1Q6PKG0 1096 aaKnown RBP14.38□□□□□ -0.11
CPSF4-213ENST00000484112 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
CPSF4-213ENST00000484112 ZBTB7CA1YPR0 619 aa14.37□□□□□ -0.11
CPSF4-213ENST00000484112 NBPF14Q5TI25 921 aa14.37□□□□□ -0.11
CPSF4-213ENST00000484112 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
CPSF4-213ENST00000484112 TNS1Q9HBL0 1735 aaKnown RBP14.37□□□□□ -0.11
CPSF4-213ENST00000484112 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
CPSF4-213ENST00000484112 TCP11L2Q8N4U5 519 aa14.36□□□□□ -0.11
CPSF4-213ENST00000484112 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
CPSF4-213ENST00000484112 PHRF1Q9P1Y6 1649 aaKnown RBP14.35□□□□□ -0.11
CPSF4-213ENST00000484112 PLEKHG3A1L390 1219 aa14.35□□□□□ -0.11
CPSF4-213ENST00000484112 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
CPSF4-213ENST00000484112 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
CPSF4-213ENST00000484112 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-213ENST00000484112 NLRP13Q86W25 1043 aa14.34□□□□□ -0.11
CPSF4-213ENST00000484112 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
CPSF4-213ENST00000484112 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
CPSF4-213ENST00000484112 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
CPSF4-213ENST00000484112 GCP02774 474 aa14.33□□□□□ -0.12
CPSF4-213ENST00000484112 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
CPSF4-213ENST00000484112 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
CPSF4-213ENST00000484112 PCGF6Q9BYE7 350 aa14.32□□□□□ -0.12
CPSF4-213ENST00000484112 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
CPSF4-213ENST00000484112 PPP1R1BQ9UD71 204 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-213ENST00000484112 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
CPSF4-213ENST00000484112 THRAP3Q9Y2W1 955 aaKnown RBP14.31□□□□□ -0.12
CPSF4-213ENST00000484112 YY1P25490 414 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 USP19O94966 1318 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 CPDO75976 1380 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 PPIP5K1Q6PFW1 1433 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
CPSF4-213ENST00000484112 NLRP6P59044 892 aa14.29□□□□□ -0.12
CPSF4-213ENST00000484112 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
CPSF4-213ENST00000484112 NEUROD1Q13562 356 aa14.28□□□□□ -0.12
CPSF4-213ENST00000484112 TOM1L2Q6ZVM7 507 aa14.28□□□□□ -0.12
CPSF4-213ENST00000484112 CABP1Q9NZU7 370 aa14.28□□□□□ -0.12
CPSF4-213ENST00000484112 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
CPSF4-213ENST00000484112 TONSLQ96HA7 1378 aa14.27□□□□□ -0.12
CPSF4-213ENST00000484112 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.12
CPSF4-213ENST00000484112 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
CPSF4-213ENST00000484112 KCNQ2O43526 872 aa14.27□□□□□ -0.13
CPSF4-213ENST00000484112 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
CPSF4-213ENST00000484112 COL5A2P05997 1499 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-213ENST00000484112 CRB1P82279 1406 aa14.26□□□□□ -0.13
CPSF4-213ENST00000484112 DDB1Q16531 1140 aa14.26□□□□□ -0.13
CPSF4-213ENST00000484112 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
CPSF4-213ENST00000484112 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
CPSF4-213ENST00000484112 C11orf95C9JLR9 678 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-213ENST00000484112 RREB1Q92766 1687 aa14.25□□□□□ -0.13
CPSF4-213ENST00000484112 SOX12O15370 315 aa14.24□□□□□ -0.13
CPSF4-213ENST00000484112 OVOS2A0A0G2JMS6 1433 aa14.24□□□□□ -0.13
CPSF4-213ENST00000484112 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
CPSF4-213ENST00000484112 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
CPSF4-213ENST00000484112 PTF1AQ7RTS3 328 aa14.23□□□□□ -0.13
CPSF4-213ENST00000484112 BCL11BQ9C0K0 894 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-213ENST00000484112 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
CPSF4-213ENST00000484112 PLSCR1O15162 318 aa14.22□□□□□ -0.13
CPSF4-213ENST00000484112 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
CPSF4-213ENST00000484112 AXIN2Q9Y2T1 843 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms