RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 PAK3O75914 559 aaPredicted RBP21.28■■□□□ 1
NR1H3-222ENST00000483882 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
NR1H3-222ENST00000483882 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
NR1H3-222ENST00000483882 KIAA1210Q9ULL0 1709 aa21.27■■□□□ 1
NR1H3-222ENST00000483882 TRPM1Q7Z4N2 1603 aa21.27■■□□□ 1
NR1H3-222ENST00000483882 A0A0G2JS52 829 aa21.26■□□□□ 0.99
NR1H3-222ENST00000483882 MYT1Q01538 1121 aa21.26■□□□□ 0.99
NR1H3-222ENST00000483882 BTG4Q9NY30 223 aa21.26■□□□□ 0.99
NR1H3-222ENST00000483882 ALS2Q96Q42 1657 aa21.25■□□□□ 0.99
NR1H3-222ENST00000483882 BLMP54132 1417 aaPredicted RBP21.25■□□□□ 0.99
NR1H3-222ENST00000483882 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
NR1H3-222ENST00000483882 ATP7BP35670 1465 aa21.24■□□□□ 0.99
NR1H3-222ENST00000483882 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
NR1H3-222ENST00000483882 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
NR1H3-222ENST00000483882 CDK19Q9BWU1 502 aa21.23■□□□□ 0.99
NR1H3-222ENST00000483882 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
NR1H3-222ENST00000483882 SF3B2Q13435 895 aaKnown RBP21.22■□□□□ 0.99
NR1H3-222ENST00000483882 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
NR1H3-222ENST00000483882 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
NR1H3-222ENST00000483882 COL14A1Q05707 1796 aaKnown RBP21.21■□□□□ 0.99
NR1H3-222ENST00000483882 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
NR1H3-222ENST00000483882 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
NR1H3-222ENST00000483882 DEFB132Q7Z7B7 95 aa21.2■□□□□ 0.98
NR1H3-222ENST00000483882 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.98
NR1H3-222ENST00000483882 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
NR1H3-222ENST00000483882 CRYBG1Q9Y4K1 1723 aa21.16■□□□□ 0.98
NR1H3-222ENST00000483882 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
NR1H3-222ENST00000483882 ACEP12821 1306 aa21.15■□□□□ 0.98
NR1H3-222ENST00000483882 EP400Q96L91 3159 aa21.15■□□□□ 0.98
NR1H3-222ENST00000483882 KIAA0232Q92628 1395 aa21.14■□□□□ 0.98
NR1H3-222ENST00000483882 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
NR1H3-222ENST00000483882 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
NR1H3-222ENST00000483882 CHRNA2Q15822 529 aa21.14■□□□□ 0.97
NR1H3-222ENST00000483882 CARD11Q9BXL7 1154 aa21.14■□□□□ 0.97
NR1H3-222ENST00000483882 POLR3AO14802 1390 aaPredicted RBP21.13■□□□□ 0.97
NR1H3-222ENST00000483882 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
NR1H3-222ENST00000483882 ZC3H6P61129 1189 aaKnown RBP21.12■□□□□ 0.97
NR1H3-222ENST00000483882 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
NR1H3-222ENST00000483882 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
NR1H3-222ENST00000483882 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
NR1H3-222ENST00000483882 CENPJQ9HC77 1338 aaPredicted RBP21.11■□□□□ 0.97
NR1H3-222ENST00000483882 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
NR1H3-222ENST00000483882 BAG6P46379 1132 aa21.1■□□□□ 0.97
NR1H3-222ENST00000483882 FAM182BQ5T319 152 aa21.09■□□□□ 0.97
NR1H3-222ENST00000483882 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
NR1H3-222ENST00000483882 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.97
NR1H3-222ENST00000483882 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
NR1H3-222ENST00000483882 SPATA31A1Q5TZJ5 1347 aa21.07■□□□□ 0.96
NR1H3-222ENST00000483882 EVA1CP58658 441 aa21.06■□□□□ 0.96
NR1H3-222ENST00000483882 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
NR1H3-222ENST00000483882 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
NR1H3-222ENST00000483882 NRKQ7Z2Y5 1582 aa21.04■□□□□ 0.96
NR1H3-222ENST00000483882 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
NR1H3-222ENST00000483882 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
NR1H3-222ENST00000483882 USP47Q96K76 1375 aa21.02■□□□□ 0.96
NR1H3-222ENST00000483882 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.96
NR1H3-222ENST00000483882 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
NR1H3-222ENST00000483882 USP19O94966 1318 aa21.02■□□□□ 0.95
NR1H3-222ENST00000483882 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
NR1H3-222ENST00000483882 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
NR1H3-222ENST00000483882 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
NR1H3-222ENST00000483882 CPDO75976 1380 aa21■□□□□ 0.95
NR1H3-222ENST00000483882 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
NR1H3-222ENST00000483882 TESK2Q96S53 571 aa21■□□□□ 0.95
NR1H3-222ENST00000483882 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
NR1H3-222ENST00000483882 GCP02774 474 aa20.99■□□□□ 0.95
NR1H3-222ENST00000483882 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
NR1H3-222ENST00000483882 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
NR1H3-222ENST00000483882 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
NR1H3-222ENST00000483882 TRIM37O94972 964 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 EVC2Q86UK5 1308 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
NR1H3-222ENST00000483882 USP6P35125 1406 aa20.96■□□□□ 0.95
NR1H3-222ENST00000483882 NLRP6P59044 892 aa20.96■□□□□ 0.95
NR1H3-222ENST00000483882 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
NR1H3-222ENST00000483882 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
NR1H3-222ENST00000483882 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
NR1H3-222ENST00000483882 EZH2Q15910 746 aaKnown RBP20.94■□□□□ 0.94
NR1H3-222ENST00000483882 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
NR1H3-222ENST00000483882 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
NR1H3-222ENST00000483882 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
NR1H3-222ENST00000483882 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
NR1H3-222ENST00000483882 APBA3O96018 575 aa20.91■□□□□ 0.94
NR1H3-222ENST00000483882 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
NR1H3-222ENST00000483882 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
NR1H3-222ENST00000483882 LRP5O75197 1615 aa20.9■□□□□ 0.94
NR1H3-222ENST00000483882 SRCAPQ6ZRS2 3230 aa20.9■□□□□ 0.94
NR1H3-222ENST00000483882 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
NR1H3-222ENST00000483882 SLIT3O75094 1523 aa20.89■□□□□ 0.94
NR1H3-222ENST00000483882 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
NR1H3-222ENST00000483882 CRB1P82279 1406 aa20.88■□□□□ 0.93
NR1H3-222ENST00000483882 AATKQ6ZMQ8 1374 aa20.87■□□□□ 0.93
NR1H3-222ENST00000483882 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
NR1H3-222ENST00000483882 TTC21BQ7Z4L5 1316 aa20.86■□□□□ 0.93
NR1H3-222ENST00000483882 SOX12O15370 315 aa20.86■□□□□ 0.93
NR1H3-222ENST00000483882 TOM1L2Q6ZVM7 507 aa20.86■□□□□ 0.93
NR1H3-222ENST00000483882 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms