RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 SSH2Q76I76 1423 aa25.83■■□□□ 1.73
PCCB-216ENST00000483687 ANKRD26Q9UPS8 1709 aa25.82■■□□□ 1.72
PCCB-216ENST00000483687 BRINP3Q76B58 766 aa25.82■■□□□ 1.72
PCCB-216ENST00000483687 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
PCCB-216ENST00000483687 BRD4O60885 1362 aaPredicted RBP25.8■■□□□ 1.72
PCCB-216ENST00000483687 TTC21AQ8NDW8 1320 aa25.8■■□□□ 1.72
PCCB-216ENST00000483687 NME9Q86XW9 330 aa25.8■■□□□ 1.72
PCCB-216ENST00000483687 MORC1Q86VD1 984 aa25.79■■□□□ 1.72
PCCB-216ENST00000483687 NPHP3Q7Z494 1330 aa25.78■■□□□ 1.72
PCCB-216ENST00000483687 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
PCCB-216ENST00000483687 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
PCCB-216ENST00000483687 MYBBP1AQ9BQG0 1328 aaKnown RBP25.77■■□□□ 1.72
PCCB-216ENST00000483687 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
PCCB-216ENST00000483687 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
PCCB-216ENST00000483687 DDX17Q92841 729 aaKnown RBP25.75■■□□□ 1.71
PCCB-216ENST00000483687 PIK3C2AO00443 1686 aa25.75■■□□□ 1.71
PCCB-216ENST00000483687 TRPM3Q9HCF6 1732 aaPredicted RBP25.74■■□□□ 1.71
PCCB-216ENST00000483687 TOM1O60784 492 aa25.74■■□□□ 1.71
PCCB-216ENST00000483687 COG3Q96JB2 828 aa25.74■■□□□ 1.71
PCCB-216ENST00000483687 ZRANB1Q9UGI0 708 aa25.74■■□□□ 1.71
PCCB-216ENST00000483687 ROBO1Q9Y6N7 1651 aa25.73■■□□□ 1.71
PCCB-216ENST00000483687 CCER2I3L3R5 266 aa25.73■■□□□ 1.71
PCCB-216ENST00000483687 CERKQ8TCT0 537 aa25.73■■□□□ 1.71
PCCB-216ENST00000483687 TNNT2P45379 298 aaPredicted RBP25.72■■□□□ 1.71
PCCB-216ENST00000483687 ABTB2Q8N961 1025 aa25.72■■□□□ 1.71
PCCB-216ENST00000483687 PXDNQ92626 1479 aa25.7■■□□□ 1.71
PCCB-216ENST00000483687 NHSL1Q5SYE7 1610 aa25.7■■□□□ 1.71
PCCB-216ENST00000483687 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
PCCB-216ENST00000483687 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
PCCB-216ENST00000483687 PPP2R1AP30153 589 aa25.69■■□□□ 1.7
PCCB-216ENST00000483687 NLRP6P59044 892 aa25.68■■□□□ 1.7
PCCB-216ENST00000483687 NLRP13Q86W25 1043 aa25.68■■□□□ 1.7
PCCB-216ENST00000483687 USP31Q70CQ4 1352 aa25.68■■□□□ 1.7
PCCB-216ENST00000483687 UBAP1LF5GYI3 381 aa25.68■■□□□ 1.7
PCCB-216ENST00000483687 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
PCCB-216ENST00000483687 LMOD2Q6P5Q4 547 aa25.67■■□□□ 1.7
PCCB-216ENST00000483687 SBNO1A3KN83 1393 aa25.67■■□□□ 1.7
PCCB-216ENST00000483687 USP54Q70EL1 1684 aa25.67■■□□□ 1.7
PCCB-216ENST00000483687 ALS2Q96Q42 1657 aa25.66■■□□□ 1.7
PCCB-216ENST00000483687 MARF1Q9Y4F3 1742 aaKnown RBP25.65■■□□□ 1.7
PCCB-216ENST00000483687 SOS2Q07890 1332 aaPredicted RBP25.65■■□□□ 1.7
PCCB-216ENST00000483687 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
PCCB-216ENST00000483687 PIP4K2BP78356 416 aa25.64■■□□□ 1.7
PCCB-216ENST00000483687 CCDC184Q52MB2 194 aa25.64■■□□□ 1.7
PCCB-216ENST00000483687 MRS2Q9HD23 443 aa25.64■■□□□ 1.7
PCCB-216ENST00000483687 TNS3Q68CZ2 1445 aa25.64■■□□□ 1.7
PCCB-216ENST00000483687 MAP2P11137 1827 aaKnown RBP25.62■■□□□ 1.69
PCCB-216ENST00000483687 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
PCCB-216ENST00000483687 SPATA31A3Q5VYP0 1347 aa25.61■■□□□ 1.69
PCCB-216ENST00000483687 FBLN1P23142 703 aa25.6■■□□□ 1.69
PCCB-216ENST00000483687 AATKQ6ZMQ8 1374 aa25.59■■□□□ 1.69
PCCB-216ENST00000483687 SOX12O15370 315 aa25.59■■□□□ 1.69
PCCB-216ENST00000483687 ARHGEF10O15013 1369 aa25.59■■□□□ 1.69
PCCB-216ENST00000483687 MTHFSP49914 203 aa25.58■■□□□ 1.69
PCCB-216ENST00000483687 PHLPP1O60346 1717 aa25.56■■□□□ 1.68
PCCB-216ENST00000483687 PLEKHG5O94827 1062 aa25.55■■□□□ 1.68
PCCB-216ENST00000483687 RRS1Q15050 365 aaKnown RBP25.55■■□□□ 1.68
PCCB-216ENST00000483687 POLKQ9UBT6 870 aa25.55■■□□□ 1.68
PCCB-216ENST00000483687 USP19O94966 1318 aa25.54■■□□□ 1.68
PCCB-216ENST00000483687 SLIT3O75094 1523 aa25.53■■□□□ 1.68
PCCB-216ENST00000483687 PPM1GO15355 546 aaPredicted RBP25.53■■□□□ 1.68
PCCB-216ENST00000483687 KCNH5Q8NCM2 988 aa25.53■■□□□ 1.68
PCCB-216ENST00000483687 EMILIN1Q9Y6C2 1016 aa25.53■■□□□ 1.68
PCCB-216ENST00000483687 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
PCCB-216ENST00000483687 LRRC59Q96AG4 307 aaKnown RBP25.51■■□□□ 1.68
PCCB-216ENST00000483687 CFAP53Q96M91 514 aa25.51■■□□□ 1.68
PCCB-216ENST00000483687 SMG6Q86US8 1419 aaKnown RBP25.51■■□□□ 1.67
PCCB-216ENST00000483687 NFAT5O94916 1531 aa25.5■■□□□ 1.67
PCCB-216ENST00000483687 GCP02774 474 aa25.5■■□□□ 1.67
PCCB-216ENST00000483687 COL16A1Q07092 1604 aaPredicted RBP25.5■■□□□ 1.67
PCCB-216ENST00000483687 PHRF1Q9P1Y6 1649 aaKnown RBP25.5■■□□□ 1.67
PCCB-216ENST00000483687 CRYBG1Q9Y4K1 1723 aa25.49■■□□□ 1.67
PCCB-216ENST00000483687 LTN1O94822 1766 aa25.49■■□□□ 1.67
PCCB-216ENST00000483687 MAP3K19Q56UN5 1328 aa25.48■■□□□ 1.67
PCCB-216ENST00000483687 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
PCCB-216ENST00000483687 FAM9BQ8IZU0 186 aa25.47■■□□□ 1.67
PCCB-216ENST00000483687 CABLES1Q8TDN4 633 aa25.47■■□□□ 1.67
PCCB-216ENST00000483687 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
PCCB-216ENST00000483687 PEAK1Q9H792 1746 aa25.46■■□□□ 1.67
PCCB-216ENST00000483687 PNPLA6Q8IY17 1366 aa25.45■■□□□ 1.67
PCCB-216ENST00000483687 AMPHP49418 695 aa25.44■■□□□ 1.66
PCCB-216ENST00000483687 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
PCCB-216ENST00000483687 ABCA3Q99758 1704 aa25.43■■□□□ 1.66
PCCB-216ENST00000483687 INSRP06213 1382 aa25.43■■□□□ 1.66
PCCB-216ENST00000483687 FLT4P35916 1363 aa25.43■■□□□ 1.66
PCCB-216ENST00000483687 SHPRHQ149N8 1683 aa25.42■■□□□ 1.66
PCCB-216ENST00000483687 ZBTB7CA1YPR0 619 aa25.42■■□□□ 1.66
PCCB-216ENST00000483687 WDR43Q15061 677 aaKnown RBP eCLIP25.42■■□□□ 1.66
PCCB-216ENST00000483687 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
PCCB-216ENST00000483687 HAP1P54257 671 aaPredicted RBP25.41■■□□□ 1.66
PCCB-216ENST00000483687 ZC3H6P61129 1189 aaKnown RBP25.4■■□□□ 1.66
PCCB-216ENST00000483687 COL22A1Q8NFW1 1626 aaPredicted RBP25.4■■□□□ 1.66
PCCB-216ENST00000483687 DIAPH1O60610 1272 aaKnown RBP25.4■■□□□ 1.66
PCCB-216ENST00000483687 ARHGEF25Q86VW2 580 aa25.4■■□□□ 1.66
PCCB-216ENST00000483687 RTL1A6NKG5 1358 aa25.39■■□□□ 1.66
PCCB-216ENST00000483687 HSP90AB2PQ58FF8 381 aa25.39■■□□□ 1.65
PCCB-216ENST00000483687 HOXC9P31274 260 aa25.38■■□□□ 1.65
PCCB-216ENST00000483687 NUDCQ9Y266 331 aa25.37■■□□□ 1.65
PCCB-216ENST00000483687 IP6K1Q92551 441 aa25.35■■□□□ 1.65
PCCB-216ENST00000483687 YTHDC1Q96MU7 727 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms