RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 GJD4Q96KN9 370 aaPredicted RBP11.49□□□□□ -0.57
PMS1-219ENST00000483293 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
PMS1-219ENST00000483293 MMP16P51512 607 aa11.48□□□□□ -0.57
PMS1-219ENST00000483293 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
PMS1-219ENST00000483293 PTPRNQ16849 979 aa11.47□□□□□ -0.57
PMS1-219ENST00000483293 CCNYL3P0C7X3 344 aa11.45□□□□□ -0.58
PMS1-219ENST00000483293 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
PMS1-219ENST00000483293 LOC100996750A0A140TA64 210 aa11.44□□□□□ -0.58
PMS1-219ENST00000483293 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
PMS1-219ENST00000483293 KRTAP4-6Q9BYQ5 205 aa11.44□□□□□ -0.58
PMS1-219ENST00000483293 PRM3Q9NNZ6 103 aa11.44□□□□□ -0.58
PMS1-219ENST00000483293 APBB1O00213 710 aa11.43□□□□□ -0.58
PMS1-219ENST00000483293 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
PMS1-219ENST00000483293 PKDCCQ504Y2 493 aa11.43□□□□□ -0.58
PMS1-219ENST00000483293 EVA1BQ9NVM1 165 aa11.43□□□□□ -0.58
PMS1-219ENST00000483293 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
PMS1-219ENST00000483293 DGAT1O75907 488 aa11.42□□□□□ -0.58
PMS1-219ENST00000483293 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
PMS1-219ENST00000483293 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
PMS1-219ENST00000483293 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
PMS1-219ENST00000483293 A6NJR5 290 aa11.39□□□□□ -0.59
PMS1-219ENST00000483293 ARID3CA6NKF2 412 aa11.39□□□□□ -0.59
PMS1-219ENST00000483293 GGCXP38435 758 aa11.39□□□□□ -0.59
PMS1-219ENST00000483293 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
PMS1-219ENST00000483293 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
PMS1-219ENST00000483293 TRAK2O60296 914 aa11.38□□□□□ -0.59
PMS1-219ENST00000483293 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
PMS1-219ENST00000483293 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
PMS1-219ENST00000483293 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
PMS1-219ENST00000483293 FKBPLQ9UIM3 349 aa11.37□□□□□ -0.59
PMS1-219ENST00000483293 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
PMS1-219ENST00000483293 IRF5Q13568 498 aa11.36□□□□□ -0.59
PMS1-219ENST00000483293 STK17AQ9UEE5 414 aa11.36□□□□□ -0.59
PMS1-219ENST00000483293 SOCS7O14512 581 aa11.35□□□□□ -0.59
PMS1-219ENST00000483293 GPR37L1O60883 481 aa11.35□□□□□ -0.59
PMS1-219ENST00000483293 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
PMS1-219ENST00000483293 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
PMS1-219ENST00000483293 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
PMS1-219ENST00000483293 BAP1Q92560 729 aa11.34□□□□□ -0.59
PMS1-219ENST00000483293 ZBTB24O43167 697 aaPredicted RBP11.33□□□□□ -0.6
PMS1-219ENST00000483293 PRR20EP86478 221 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 PRR20CP86479 221 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 PRR20DP86480 221 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 PRR20BP86481 221 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 PRR20AP86496 221 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 WWC1Q8IX03 1113 aa11.33□□□□□ -0.6
PMS1-219ENST00000483293 POM121CA8CG34 1229 aa11.32□□□□□ -0.6
PMS1-219ENST00000483293 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
PMS1-219ENST00000483293 SLC19A1P41440 591 aa11.31□□□□□ -0.6
PMS1-219ENST00000483293 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
PMS1-219ENST00000483293 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
PMS1-219ENST00000483293 AGERQ15109 404 aa11.29□□□□□ -0.6
PMS1-219ENST00000483293 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
PMS1-219ENST00000483293 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
PMS1-219ENST00000483293 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
PMS1-219ENST00000483293 WFS1O76024 890 aa11.28□□□□□ -0.6
PMS1-219ENST00000483293 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
PMS1-219ENST00000483293 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
PMS1-219ENST00000483293 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
PMS1-219ENST00000483293 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
PMS1-219ENST00000483293 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
PMS1-219ENST00000483293 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.61
PMS1-219ENST00000483293 ARID3AQ99856 593 aa11.27□□□□□ -0.61
PMS1-219ENST00000483293 CARD14Q9BXL6 1004 aa11.27□□□□□ -0.61
PMS1-219ENST00000483293 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
PMS1-219ENST00000483293 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 PTK2Q05397 1052 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 TRIM32Q13049 653 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 ARHGAP9Q9BRR9 750 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
PMS1-219ENST00000483293 WIPF1O43516 503 aa11.24□□□□□ -0.61
PMS1-219ENST00000483293 SH3BP2P78314 561 aa11.24□□□□□ -0.61
PMS1-219ENST00000483293 NR1H3Q13133 447 aa11.24□□□□□ -0.61
PMS1-219ENST00000483293 ZNF511Q8NB15 262 aa11.24□□□□□ -0.61
PMS1-219ENST00000483293 GDF9O60383 454 aa11.23□□□□□ -0.61
PMS1-219ENST00000483293 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
PMS1-219ENST00000483293 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
PMS1-219ENST00000483293 OCSTAMPQ9BR26 566 aa11.23□□□□□ -0.61
PMS1-219ENST00000483293 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
PMS1-219ENST00000483293 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
PMS1-219ENST00000483293 SKOR1P84550 965 aa11.21□□□□□ -0.61
PMS1-219ENST00000483293 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
PMS1-219ENST00000483293 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
PMS1-219ENST00000483293 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
PMS1-219ENST00000483293 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
PMS1-219ENST00000483293 PCDHB9Q9Y5E1 797 aa11.21□□□□□ -0.61
PMS1-219ENST00000483293 TNFRSF10AO00220 468 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 RPIAP49247 311 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
PMS1-219ENST00000483293 SEMA3FQ13275 785 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 GLMNQ92990 594 aa11.2□□□□□ -0.62
PMS1-219ENST00000483293 ZNF697Q5TEC3 545 aa11.19□□□□□ -0.62
PMS1-219ENST00000483293 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
PMS1-219ENST00000483293 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
PMS1-219ENST00000483293 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
PMS1-219ENST00000483293 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
PMS1-219ENST00000483293 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms