RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 MAP3K7O43318 606 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 ATP9BO43861 1147 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 LILRB3O75022 631 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 NFX1Q12986 1120 aaKnown RBP7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 PPP4R3BQ5MIZ7 849 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 RSBN1LQ6PCB5 846 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 PHOX2BQ99453 314 aa7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 METTL14Q9HCE5 456 aaKnown RBP7.21□□□□□ -1.26
R3HDM1-216ENST00000483065 FAM181BA6NEQ2 426 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 EVI5O60447 810 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 ERCC5P28715 1186 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 EIF4G2P78344 907 aaKnown RBP eCLIP7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 EN1Q05925 392 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 VAC14Q08AM6 782 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 TAF7LQ5H9L4 462 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 SULF1Q8IWU6 871 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 SPIRE2Q8WWL2 714 aa7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 UPF1Q92900 1129 aaKnown RBP eCLIP7.2□□□□□ -1.26
R3HDM1-216ENST00000483065 LZTS3O60299 673 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-216ENST00000483065 COL19A1Q14993 1142 aa7.19□□□□□ -1.26
R3HDM1-216ENST00000483065 CCDC181Q5TID7 509 aa7.19□□□□□ -1.26
R3HDM1-216ENST00000483065 MYH16Q9H6N6 1097 aa7.19□□□□□ -1.26
R3HDM1-216ENST00000483065 CUEDC1Q9NWM3 386 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-216ENST00000483065 MARCH6O60337 910 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 KDM4AO75164 1064 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 SSFA2P28290 1259 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 CSPP1Q1MSJ5 1256 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 NYAP1Q6ZVC0 841 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 DPH6Q7L8W6 267 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 PXYLP1Q8TE99 480 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 NOVA2Q9UNW9 492 aaKnown RBP7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.18□□□□□ -1.26
R3HDM1-216ENST00000483065 HMGB1P1B2RPK0 211 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 FGD1P98174 961 aa7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 ZSCAN29Q8IWY8 852 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 HELBQ8NG08 1087 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 GJD4Q96KN9 370 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 ZBTB3Q9H5J0 574 aa7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-216ENST00000483065 KIF3CO14782 793 aa7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 SCAMP3O14828 347 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 PHF14O94880 888 aa7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 TICAM2Q86XR7 235 aa7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 NFATC2IPQ8NCF5 419 aa7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 ARMC5Q96C12 935 aa7.16□□□□□ -1.26
R3HDM1-216ENST00000483065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 GORABQ5T7V8 394 aa7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 TANGO6Q9C0B7 1094 aa7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 RBM27Q9P2N5 1060 aaKnown RBP7.15□□□□□ -1.26
R3HDM1-216ENST00000483065 PRIM1P49642 420 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 GNL2Q13823 731 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 FBXO31Q5XUX0 539 aaPredicted RBP7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 GIMAP6Q6P9H5 292 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 PRR7Q8TB68 274 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 MICAL1Q8TDZ2 1067 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 CLP1Q92989 425 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 NLRP2Q9NX02 1062 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 EGFL7Q9UHF1 273 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 ADGRG1Q9Y653 693 aa7.14□□□□□ -1.27
R3HDM1-216ENST00000483065 C2orf72A6NCS6 295 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 DGAT1O75907 488 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 RECKO95980 971 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 IGBP1P78318 339 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 PKDCCQ504Y2 493 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 PHLDB3Q6NSJ2 640 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 LARP1Q6PKG0 1096 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 TBC1D9Q6ZT07 1266 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 ZCRB1Q8TBF4 217 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 FAM200AQ8TCP9 573 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 PSMG3-AS1Q96PY0 264 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 PCGF6Q9BYE7 350 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 CDHR5Q9HBB8 845 aa7.13□□□□□ -1.27
R3HDM1-216ENST00000483065 TLDC2A0PJX2 215 aa7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 ATP2B1P20020 1258 aa7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 QPCTQ16769 361 aa7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 RTL5Q5HYW3 569 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 PPARGC1BQ86YN6 1023 aaKnown RBP7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 CDCA7Q9BWT1 371 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 ZMIZ1Q9ULJ6 1067 aa7.12□□□□□ -1.27
R3HDM1-216ENST00000483065 CD46P15529 392 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 ATP2B4P23634 1241 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 EAPPQ56P03 285 aaPredicted RBP7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 RNF135Q8IUD6 432 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 C1orf216Q8TAB5 229 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 STK32AQ8WU08 396 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 RIPOR2Q9Y4F9 1068 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms