RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-205ENST00000482968 XPCQ01831 940 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-205ENST00000482968 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.86
PHGDH-205ENST00000482968 BRINP3Q76B58 766 aa20.39■□□□□ 0.86
PHGDH-205ENST00000482968 SSH2Q76I76 1423 aa20.39■□□□□ 0.86
PHGDH-205ENST00000482968 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.86
PHGDH-205ENST00000482968 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.86
PHGDH-205ENST00000482968 NSD2O96028 1365 aa20.39■□□□□ 0.85
PHGDH-205ENST00000482968 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
PHGDH-205ENST00000482968 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
PHGDH-205ENST00000482968 MYBBP1AQ9BQG0 1328 aaKnown RBP20.38■□□□□ 0.85
PHGDH-205ENST00000482968 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
PHGDH-205ENST00000482968 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
PHGDH-205ENST00000482968 TTC21AQ8NDW8 1320 aa20.37■□□□□ 0.85
PHGDH-205ENST00000482968 NRKQ7Z2Y5 1582 aa20.37■□□□□ 0.85
PHGDH-205ENST00000482968 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
PHGDH-205ENST00000482968 PPP2R1AP30153 589 aa20.35■□□□□ 0.85
PHGDH-205ENST00000482968 ABTB2Q8N961 1025 aa20.35■□□□□ 0.85
PHGDH-205ENST00000482968 COG3Q96JB2 828 aa20.35■□□□□ 0.85
PHGDH-205ENST00000482968 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
PHGDH-205ENST00000482968 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
PHGDH-205ENST00000482968 BRD4O60885 1362 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-205ENST00000482968 NLRP6P59044 892 aa20.32■□□□□ 0.84
PHGDH-205ENST00000482968 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
PHGDH-205ENST00000482968 TOM1O60784 492 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 LMOD2Q6P5Q4 547 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 NLRP13Q86W25 1043 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 CERKQ8TCT0 537 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 FBLN1P23142 703 aa20.31■□□□□ 0.84
PHGDH-205ENST00000482968 PIK3C2AO00443 1686 aa20.29■□□□□ 0.84
PHGDH-205ENST00000482968 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
PHGDH-205ENST00000482968 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
PHGDH-205ENST00000482968 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-205ENST00000482968 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
PHGDH-205ENST00000482968 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 SOX12O15370 315 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 MTHFSP49914 203 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 PXDNQ92626 1479 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
PHGDH-205ENST00000482968 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
PHGDH-205ENST00000482968 SOS2Q07890 1332 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-205ENST00000482968 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
PHGDH-205ENST00000482968 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
PHGDH-205ENST00000482968 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
PHGDH-205ENST00000482968 PPM1GO15355 546 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-205ENST00000482968 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
PHGDH-205ENST00000482968 RRS1Q15050 365 aaKnown RBP20.22■□□□□ 0.83
PHGDH-205ENST00000482968 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
PHGDH-205ENST00000482968 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
PHGDH-205ENST00000482968 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
PHGDH-205ENST00000482968 TNS3Q68CZ2 1445 aa20.21■□□□□ 0.83
PHGDH-205ENST00000482968 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
PHGDH-205ENST00000482968 ALS2Q96Q42 1657 aa20.2■□□□□ 0.82
PHGDH-205ENST00000482968 AATKQ6ZMQ8 1374 aa20.2■□□□□ 0.82
PHGDH-205ENST00000482968 EMILIN1Q9Y6C2 1016 aa20.2■□□□□ 0.82
PHGDH-205ENST00000482968 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
PHGDH-205ENST00000482968 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
PHGDH-205ENST00000482968 USP54Q70EL1 1684 aa20.18■□□□□ 0.82
PHGDH-205ENST00000482968 GCP02774 474 aa20.17■□□□□ 0.82
PHGDH-205ENST00000482968 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
PHGDH-205ENST00000482968 ARHGEF10O15013 1369 aa20.17■□□□□ 0.82
PHGDH-205ENST00000482968 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
PHGDH-205ENST00000482968 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
PHGDH-205ENST00000482968 USP19O94966 1318 aa20.15■□□□□ 0.82
PHGDH-205ENST00000482968 MAP3K19Q56UN5 1328 aa20.15■□□□□ 0.82
PHGDH-205ENST00000482968 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-205ENST00000482968 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
PHGDH-205ENST00000482968 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
PHGDH-205ENST00000482968 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-205ENST00000482968 AMPHP49418 695 aa20.13■□□□□ 0.81
PHGDH-205ENST00000482968 PHLPP1O60346 1717 aa20.12■□□□□ 0.81
PHGDH-205ENST00000482968 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-205ENST00000482968 WDR43Q15061 677 aaKnown RBP eCLIP20.11■□□□□ 0.81
PHGDH-205ENST00000482968 SLIT3O75094 1523 aa20.11■□□□□ 0.81
PHGDH-205ENST00000482968 PNPLA6Q8IY17 1366 aa20.11■□□□□ 0.81
PHGDH-205ENST00000482968 ZC3H6P61129 1189 aaKnown RBP20.11■□□□□ 0.81
PHGDH-205ENST00000482968 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
PHGDH-205ENST00000482968 NFAT5O94916 1531 aa20.1■□□□□ 0.81
PHGDH-205ENST00000482968 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
PHGDH-205ENST00000482968 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
PHGDH-205ENST00000482968 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
PHGDH-205ENST00000482968 HAP1P54257 671 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-205ENST00000482968 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.81
PHGDH-205ENST00000482968 INSRP06213 1382 aa20.08■□□□□ 0.81
PHGDH-205ENST00000482968 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-205ENST00000482968 PEAK1Q9H792 1746 aa20.08■□□□□ 0.8
PHGDH-205ENST00000482968 NUDCQ9Y266 331 aa20.08■□□□□ 0.8
PHGDH-205ENST00000482968 LTN1O94822 1766 aa20.08■□□□□ 0.8
PHGDH-205ENST00000482968 HOXC9P31274 260 aa20.07■□□□□ 0.8
PHGDH-205ENST00000482968 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-205ENST00000482968 COL16A1Q07092 1604 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-205ENST00000482968 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
PHGDH-205ENST00000482968 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
PHGDH-205ENST00000482968 FLT4P35916 1363 aa20.06■□□□□ 0.8
PHGDH-205ENST00000482968 CRYBG1Q9Y4K1 1723 aa20.05■□□□□ 0.8
PHGDH-205ENST00000482968 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
PHGDH-205ENST00000482968 IL13P35225 146 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms