RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
COL16A1-213ENST00000482910 CRYBG1Q9Y4K1 1723 aa21.35■■□□□ 1.01
COL16A1-213ENST00000482910 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
COL16A1-213ENST00000482910 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
COL16A1-213ENST00000482910 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
COL16A1-213ENST00000482910 TESK2Q96S53 571 aa21.33■■□□□ 1.01
COL16A1-213ENST00000482910 USP47Q96K76 1375 aa21.33■■□□□ 1
COL16A1-213ENST00000482910 CDK12Q9NYV4 1490 aaPredicted RBP21.32■■□□□ 1
COL16A1-213ENST00000482910 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
COL16A1-213ENST00000482910 USP6P35125 1406 aa21.32■■□□□ 1
COL16A1-213ENST00000482910 ST20-MTHFSA0A0A6YYL1 179 aa21.32■■□□□ 1
COL16A1-213ENST00000482910 USP21Q9UK80 565 aa21.32■■□□□ 1
COL16A1-213ENST00000482910 SLIT2O94813 1529 aa21.32■■□□□ 1
COL16A1-213ENST00000482910 AKAP12Q02952 1782 aa21.31■■□□□ 1
COL16A1-213ENST00000482910 RXRBP28702 533 aa21.31■■□□□ 1
COL16A1-213ENST00000482910 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
COL16A1-213ENST00000482910 QTRT2Q9H974 415 aaKnown RBP21.31■■□□□ 1
COL16A1-213ENST00000482910 BCL9LQ86UU0 1499 aa21.31■■□□□ 1
COL16A1-213ENST00000482910 TRPC5Q9UL62 973 aaPredicted RBP21.3■■□□□ 1
COL16A1-213ENST00000482910 ATRNO75882 1429 aa21.29■■□□□ 1
COL16A1-213ENST00000482910 SSH2Q76I76 1423 aa21.29■■□□□ 1
COL16A1-213ENST00000482910 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
COL16A1-213ENST00000482910 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
COL16A1-213ENST00000482910 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
COL16A1-213ENST00000482910 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
COL16A1-213ENST00000482910 ABTB2Q8N961 1025 aa21.27■■□□□ 1
COL16A1-213ENST00000482910 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
COL16A1-213ENST00000482910 UNC5CLQ8IV45 518 aa21.26■□□□□ 0.99
COL16A1-213ENST00000482910 USP19O94966 1318 aa21.26■□□□□ 0.99
COL16A1-213ENST00000482910 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
COL16A1-213ENST00000482910 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
COL16A1-213ENST00000482910 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
COL16A1-213ENST00000482910 NRKQ7Z2Y5 1582 aa21.24■□□□□ 0.99
COL16A1-213ENST00000482910 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
COL16A1-213ENST00000482910 FAM83GA6ND36 823 aa21.23■□□□□ 0.99
COL16A1-213ENST00000482910 PLEKHG5O94827 1062 aa21.23■□□□□ 0.99
COL16A1-213ENST00000482910 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
COL16A1-213ENST00000482910 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
COL16A1-213ENST00000482910 TMF1P82094 1093 aa21.22■□□□□ 0.99
COL16A1-213ENST00000482910 KTN1Q86UP2 1357 aaKnown RBP21.22■□□□□ 0.99
COL16A1-213ENST00000482910 PIK3C2AO00443 1686 aa21.21■□□□□ 0.99
COL16A1-213ENST00000482910 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
COL16A1-213ENST00000482910 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
COL16A1-213ENST00000482910 NUTM2GQ5VZR2 741 aa21.2■□□□□ 0.98
COL16A1-213ENST00000482910 CPDO75976 1380 aa21.2■□□□□ 0.98
COL16A1-213ENST00000482910 SLIT3O75094 1523 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
COL16A1-213ENST00000482910 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
COL16A1-213ENST00000482910 SLC12A5Q9H2X9 1139 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 PRDM11Q9NQV5 511 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 TERF2IPQ9NYB0 399 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 RGS12O14924 1447 aa21.19■□□□□ 0.98
COL16A1-213ENST00000482910 NLRP6P59044 892 aa21.18■□□□□ 0.98
COL16A1-213ENST00000482910 VPS72Q15906 364 aa21.18■□□□□ 0.98
COL16A1-213ENST00000482910 KIAA0232Q92628 1395 aa21.18■□□□□ 0.98
COL16A1-213ENST00000482910 GCP02774 474 aa21.17■□□□□ 0.98
COL16A1-213ENST00000482910 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
COL16A1-213ENST00000482910 USP54Q70EL1 1684 aa21.16■□□□□ 0.98
COL16A1-213ENST00000482910 BTG4Q9NY30 223 aa21.16■□□□□ 0.98
COL16A1-213ENST00000482910 GLI3P10071 1580 aa21.15■□□□□ 0.98
COL16A1-213ENST00000482910 A0A1W2PP64 1363 aa21.15■□□□□ 0.98
COL16A1-213ENST00000482910 USP31Q70CQ4 1352 aa21.14■□□□□ 0.98
COL16A1-213ENST00000482910 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
COL16A1-213ENST00000482910 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
COL16A1-213ENST00000482910 ANKRD36BQ8N2N9 1353 aa21.12■□□□□ 0.97
COL16A1-213ENST00000482910 LMO7Q8WWI1 1683 aa21.12■□□□□ 0.97
COL16A1-213ENST00000482910 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
COL16A1-213ENST00000482910 CHRNA2Q15822 529 aa21.1■□□□□ 0.97
COL16A1-213ENST00000482910 ONECUT3O60422 494 aaPredicted RBP21.09■□□□□ 0.97
COL16A1-213ENST00000482910 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
COL16A1-213ENST00000482910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL16A1-213ENST00000482910 AATKQ6ZMQ8 1374 aa21.08■□□□□ 0.96
COL16A1-213ENST00000482910 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
COL16A1-213ENST00000482910 CCDC9Q9Y3X0 531 aaKnown RBP21.07■□□□□ 0.96
COL16A1-213ENST00000482910 NFAT5O94916 1531 aa21.07■□□□□ 0.96
COL16A1-213ENST00000482910 SPATA31A5Q5VU36 1347 aa21.06■□□□□ 0.96
COL16A1-213ENST00000482910 SPATA31A7Q8IWB4 1347 aa21.06■□□□□ 0.96
COL16A1-213ENST00000482910 MYOM1P52179 1685 aa21.06■□□□□ 0.96
COL16A1-213ENST00000482910 ABCC6O95255 1503 aa21.06■□□□□ 0.96
COL16A1-213ENST00000482910 COL18A1P39060 1754 aa21.05■□□□□ 0.96
COL16A1-213ENST00000482910 OVOS2A0A0J9YW53 1432 aa21.05■□□□□ 0.96
COL16A1-213ENST00000482910 OVOS2Q6IE36 1432 aa21.05■□□□□ 0.96
COL16A1-213ENST00000482910 ARHGEF25Q86VW2 580 aa21.05■□□□□ 0.96
COL16A1-213ENST00000482910 NME9Q86XW9 330 aa21.05■□□□□ 0.96
COL16A1-213ENST00000482910 COL5A2P05997 1499 aaPredicted RBP21.03■□□□□ 0.96
COL16A1-213ENST00000482910 SPATA31A1Q5TZJ5 1347 aa21.03■□□□□ 0.96
COL16A1-213ENST00000482910 EVA1CP58658 441 aa21.02■□□□□ 0.96
COL16A1-213ENST00000482910 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
COL16A1-213ENST00000482910 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
COL16A1-213ENST00000482910 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
COL16A1-213ENST00000482910 SEPT12Q8IYM1 358 aa21.01■□□□□ 0.95
COL16A1-213ENST00000482910 STRN4Q9NRL3 753 aa21.01■□□□□ 0.95
COL16A1-213ENST00000482910 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
COL16A1-213ENST00000482910 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
COL16A1-213ENST00000482910 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
COL16A1-213ENST00000482910 CRB1P82279 1406 aa20.97■□□□□ 0.95
COL16A1-213ENST00000482910 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
COL16A1-213ENST00000482910 COG3Q96JB2 828 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms