RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 FAM98CQ17RN3 349 aaKnown RBP22.76■■□□□ 1.23
PCOLCE-206ENST00000482863 NWD2Q9ULI1 1742 aa22.76■■□□□ 1.23
PCOLCE-206ENST00000482863 A0A0G2JS52 829 aa22.75■■□□□ 1.23
PCOLCE-206ENST00000482863 MYT1Q01538 1121 aa22.75■■□□□ 1.23
PCOLCE-206ENST00000482863 CCDC125Q86Z20 511 aa22.75■■□□□ 1.23
PCOLCE-206ENST00000482863 NRAPQ86VF7 1730 aa22.74■■□□□ 1.23
PCOLCE-206ENST00000482863 CHRNA2Q15822 529 aa22.73■■□□□ 1.23
PCOLCE-206ENST00000482863 KRT27Q7Z3Y8 459 aa22.73■■□□□ 1.23
PCOLCE-206ENST00000482863 ZRANB1Q9UGI0 708 aa22.73■■□□□ 1.23
PCOLCE-206ENST00000482863 ACEP12821 1306 aa22.73■■□□□ 1.23
PCOLCE-206ENST00000482863 FAM182BQ5T319 152 aa22.72■■□□□ 1.23
PCOLCE-206ENST00000482863 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
PCOLCE-206ENST00000482863 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
PCOLCE-206ENST00000482863 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
PCOLCE-206ENST00000482863 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
PCOLCE-206ENST00000482863 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
PCOLCE-206ENST00000482863 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
PCOLCE-206ENST00000482863 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.22
PCOLCE-206ENST00000482863 COL14A1Q05707 1796 aaKnown RBP22.69■■□□□ 1.22
PCOLCE-206ENST00000482863 KIAA0232Q92628 1395 aa22.69■■□□□ 1.22
PCOLCE-206ENST00000482863 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
PCOLCE-206ENST00000482863 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
PCOLCE-206ENST00000482863 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
PCOLCE-206ENST00000482863 L3MBTL2Q969R5 705 aa22.68■■□□□ 1.22
PCOLCE-206ENST00000482863 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
PCOLCE-206ENST00000482863 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
PCOLCE-206ENST00000482863 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
PCOLCE-206ENST00000482863 ITSN1Q15811 1721 aa22.66■■□□□ 1.22
PCOLCE-206ENST00000482863 KIAA1210Q9ULL0 1709 aa22.66■■□□□ 1.22
PCOLCE-206ENST00000482863 STRN4Q9NRL3 753 aa22.66■■□□□ 1.22
PCOLCE-206ENST00000482863 TOPAZ1Q8N9V7 1692 aa22.65■■□□□ 1.22
PCOLCE-206ENST00000482863 CENPJQ9HC77 1338 aaPredicted RBP22.65■■□□□ 1.22
PCOLCE-206ENST00000482863 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
PCOLCE-206ENST00000482863 SF3B2Q13435 895 aaKnown RBP22.64■■□□□ 1.21
PCOLCE-206ENST00000482863 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
PCOLCE-206ENST00000482863 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
PCOLCE-206ENST00000482863 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
PCOLCE-206ENST00000482863 PPIP5K1Q6PFW1 1433 aa22.61■■□□□ 1.21
PCOLCE-206ENST00000482863 SPATA31A1Q5TZJ5 1347 aa22.6■■□□□ 1.21
PCOLCE-206ENST00000482863 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
PCOLCE-206ENST00000482863 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
PCOLCE-206ENST00000482863 EN1Q05925 392 aaPredicted RBP22.57■■□□□ 1.2
PCOLCE-206ENST00000482863 THSD7AQ9UPZ6 1657 aa22.56■■□□□ 1.2
PCOLCE-206ENST00000482863 EVA1CP58658 441 aa22.56■■□□□ 1.2
PCOLCE-206ENST00000482863 LARP1Q6PKG0 1096 aaKnown RBP22.56■■□□□ 1.2
PCOLCE-206ENST00000482863 USP19O94966 1318 aa22.56■■□□□ 1.2
PCOLCE-206ENST00000482863 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
PCOLCE-206ENST00000482863 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
PCOLCE-206ENST00000482863 ZBTB7CA1YPR0 619 aa22.55■■□□□ 1.2
PCOLCE-206ENST00000482863 PSDA5PKW4 1024 aaPredicted RBP22.55■■□□□ 1.2
PCOLCE-206ENST00000482863 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
PCOLCE-206ENST00000482863 GCP02774 474 aa22.54■■□□□ 1.2
PCOLCE-206ENST00000482863 BAG6P46379 1132 aa22.54■■□□□ 1.2
PCOLCE-206ENST00000482863 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
PCOLCE-206ENST00000482863 NLRP13Q86W25 1043 aa22.52■■□□□ 1.2
PCOLCE-206ENST00000482863 TRPM1Q7Z4N2 1603 aa22.5■■□□□ 1.19
PCOLCE-206ENST00000482863 TRIM37O94972 964 aa22.5■■□□□ 1.19
PCOLCE-206ENST00000482863 NLRP6P59044 892 aa22.5■■□□□ 1.19
PCOLCE-206ENST00000482863 CPDO75976 1380 aa22.5■■□□□ 1.19
PCOLCE-206ENST00000482863 USP6P35125 1406 aa22.49■■□□□ 1.19
PCOLCE-206ENST00000482863 EZH2Q15910 746 aaKnown RBP22.49■■□□□ 1.19
PCOLCE-206ENST00000482863 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
PCOLCE-206ENST00000482863 LMO7Q8WWI1 1683 aa22.49■■□□□ 1.19
PCOLCE-206ENST00000482863 EVC2Q86UK5 1308 aa22.47■■□□□ 1.19
PCOLCE-206ENST00000482863 BARGINQ6ZT62 677 aa22.46■■□□□ 1.19
PCOLCE-206ENST00000482863 TCP11L2Q8N4U5 519 aa22.45■■□□□ 1.18
PCOLCE-206ENST00000482863 RGPD1P0DJD0 1748 aa22.44■■□□□ 1.18
PCOLCE-206ENST00000482863 FAM196AQ6ZSG2 479 aa22.44■■□□□ 1.18
PCOLCE-206ENST00000482863 TNS1Q9HBL0 1735 aaKnown RBP22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 SOX12O15370 315 aa22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 R3HDM1Q15032 1099 aaKnown RBP22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
PCOLCE-206ENST00000482863 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
PCOLCE-206ENST00000482863 APBA3O96018 575 aa22.42■■□□□ 1.18
PCOLCE-206ENST00000482863 CAMKK2Q96RR4 588 aa22.42■■□□□ 1.18
PCOLCE-206ENST00000482863 PIK3C2AO00443 1686 aa22.41■■□□□ 1.18
PCOLCE-206ENST00000482863 SLIT3O75094 1523 aa22.41■■□□□ 1.18
PCOLCE-206ENST00000482863 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
PCOLCE-206ENST00000482863 DISP2A7MBM2 1401 aa22.39■■□□□ 1.17
PCOLCE-206ENST00000482863 AATKQ6ZMQ8 1374 aa22.38■■□□□ 1.17
PCOLCE-206ENST00000482863 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
PCOLCE-206ENST00000482863 CRB1P82279 1406 aa22.37■■□□□ 1.17
PCOLCE-206ENST00000482863 ZNF692Q9BU19 519 aaPredicted RBP22.36■■□□□ 1.17
PCOLCE-206ENST00000482863 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
PCOLCE-206ENST00000482863 TOM1L2Q6ZVM7 507 aa22.35■■□□□ 1.17
PCOLCE-206ENST00000482863 ARHGEF25Q86VW2 580 aa22.35■■□□□ 1.17
PCOLCE-206ENST00000482863 COL18A1P39060 1754 aa22.35■■□□□ 1.17
PCOLCE-206ENST00000482863 CPSF1Q10570 1443 aaKnown RBP22.34■■□□□ 1.17
PCOLCE-206ENST00000482863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
PCOLCE-206ENST00000482863 KTN1Q86UP2 1357 aaKnown RBP22.34■■□□□ 1.17
PCOLCE-206ENST00000482863 PTF1AQ7RTS3 328 aa22.33■■□□□ 1.17
PCOLCE-206ENST00000482863 AKAP12Q02952 1782 aa22.32■■□□□ 1.16
PCOLCE-206ENST00000482863 LRP5O75197 1615 aa22.31■■□□□ 1.16
PCOLCE-206ENST00000482863 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
PCOLCE-206ENST00000482863 NME9Q86XW9 330 aa22.3■■□□□ 1.16
PCOLCE-206ENST00000482863 TMC1Q8TDI8 760 aa22.3■■□□□ 1.16
PCOLCE-206ENST00000482863 PARP4Q9UKK3 1724 aaKnown RBP22.3■■□□□ 1.16
PCOLCE-206ENST00000482863 TTC21AQ8NDW8 1320 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms