RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 HAP1P54257 671 aaPredicted RBP5.8□□□□□ -1.48
USH2A-204ENST00000481786 RNFT1Q5M7Z0 435 aa5.8□□□□□ -1.48
USH2A-204ENST00000481786 RETREG3Q86VR2 466 aa5.8□□□□□ -1.48
USH2A-204ENST00000481786 ITPKCQ96DU7 683 aa5.8□□□□□ -1.48
USH2A-204ENST00000481786 ZIC2O95409 532 aaPredicted RBP5.79□□□□□ -1.48
USH2A-204ENST00000481786 USP46P62068 366 aa5.79□□□□□ -1.48
USH2A-204ENST00000481786 ZNF511Q8NB15 262 aa5.79□□□□□ -1.48
USH2A-204ENST00000481786 EVA1BQ9NVM1 165 aa5.79□□□□□ -1.48
USH2A-204ENST00000481786 MS4A1P11836 297 aa5.78□□□□□ -1.48
USH2A-204ENST00000481786 VARSP26640 1264 aaKnown RBP5.78□□□□□ -1.48
USH2A-204ENST00000481786 COL25A1Q9BXS0 654 aaPredicted RBP5.78□□□□□ -1.48
USH2A-204ENST00000481786 PLEKHG3A1L390 1219 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 C6orf229H3BNL8 230 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 BMP2P12643 396 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 KCNH2Q12809 1159 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 MPNDQ8N594 471 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
USH2A-204ENST00000481786 SOS2Q07890 1332 aaPredicted RBP5.76□□□□□ -1.49
USH2A-204ENST00000481786 ARID5BQ14865 1188 aa5.76□□□□□ -1.49
USH2A-204ENST00000481786 P3H3Q8IVL6 736 aa5.76□□□□□ -1.49
USH2A-204ENST00000481786 SVOPQ8N4V2 548 aa5.76□□□□□ -1.49
USH2A-204ENST00000481786 FOXJ1Q92949 421 aa5.76□□□□□ -1.49
USH2A-204ENST00000481786 KDM2AQ9Y2K7 1162 aa5.76□□□□□ -1.49
USH2A-204ENST00000481786 DNMT3AQ9Y6K1 912 aaPredicted RBP5.76□□□□□ -1.49
USH2A-204ENST00000481786 RNF225M0QZC1 329 aaPredicted RBP5.75□□□□□ -1.49
USH2A-204ENST00000481786 ARHGEF15O94989 841 aa5.75□□□□□ -1.49
USH2A-204ENST00000481786 FDX1P10109 184 aa5.75□□□□□ -1.49
USH2A-204ENST00000481786 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
USH2A-204ENST00000481786 NDUFV2P19404 249 aa5.74□□□□□ -1.49
USH2A-204ENST00000481786 PTPRNQ16849 979 aa5.74□□□□□ -1.49
USH2A-204ENST00000481786 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
USH2A-204ENST00000481786 SMYD5Q6GMV2 418 aa5.74□□□□□ -1.49
USH2A-204ENST00000481786 GPIHBP1Q8IV16 184 aa5.74□□□□□ -1.49
USH2A-204ENST00000481786 FIGNL2A6NMB9 653 aa5.73□□□□□ -1.49
USH2A-204ENST00000481786 GRM5P41594 1212 aa5.73□□□□□ -1.49
USH2A-204ENST00000481786 PTSQ03393 145 aa5.73□□□□□ -1.49
USH2A-204ENST00000481786 VSIG10Q8N0Z9 540 aa5.73□□□□□ -1.49
USH2A-204ENST00000481786 CDK15Q96Q40 435 aa5.73□□□□□ -1.49
USH2A-204ENST00000481786 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
USH2A-204ENST00000481786 IRF6O14896 467 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 ADAM23O75077 832 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 ITGB2P05107 769 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 NUTM1Q86Y26 1132 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 MEIOBQ8N635 442 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 PRR7Q8TB68 274 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 FAM174AQ8TBP5 190 aa5.72□□□□□ -1.49
USH2A-204ENST00000481786 FAM217BQ9NTX9 383 aaPredicted RBP5.72□□□□□ -1.49
USH2A-204ENST00000481786 IGHA1P01876 353 aa5.71□□□□□ -1.5
USH2A-204ENST00000481786 MAP2K5Q13163 448 aa5.71□□□□□ -1.5
USH2A-204ENST00000481786 SLURP2P0DP57 97 aa5.7□□□□□ -1.5
USH2A-204ENST00000481786 CTHP32929 405 aa5.7□□□□□ -1.5
USH2A-204ENST00000481786 VWA5B2Q8N398 1253 aa5.7□□□□□ -1.5
USH2A-204ENST00000481786 CCDC155Q8N6L0 562 aa5.7□□□□□ -1.5
USH2A-204ENST00000481786 MAP10Q9P2G4 905 aa5.7□□□□□ -1.5
USH2A-204ENST00000481786 MOXD2PA6NHM9 499 aa5.69□□□□□ -1.5
USH2A-204ENST00000481786 MARSP56192 900 aaKnown RBP5.69□□□□□ -1.5
USH2A-204ENST00000481786 LYPD4Q6UWN0 246 aa5.69□□□□□ -1.5
USH2A-204ENST00000481786 NANOS1Q8WY41 292 aaKnown RBP5.69□□□□□ -1.5
USH2A-204ENST00000481786 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
USH2A-204ENST00000481786 TTLL8A6PVC2 850 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 UPP2O95045 317 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 NR5A1Q13285 461 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.68□□□□□ -1.5
USH2A-204ENST00000481786 PLA2G4EQ3MJ16 856 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 SPIRE2Q8WWL2 714 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 GPCPD1Q9NPB8 672 aa5.68□□□□□ -1.5
USH2A-204ENST00000481786 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
USH2A-204ENST00000481786 CDC14CA4D256 554 aa5.67□□□□□ -1.5
USH2A-204ENST00000481786 FOXK2Q01167 660 aa5.67□□□□□ -1.5
USH2A-204ENST00000481786 KANK3Q6NY19 840 aa5.67□□□□□ -1.5
USH2A-204ENST00000481786 CCDC102AQ96A19 550 aa5.67□□□□□ -1.5
USH2A-204ENST00000481786 SLC35F4A4IF30 521 aa5.66□□□□□ -1.5
USH2A-204ENST00000481786 CBLBQ13191 982 aa5.66□□□□□ -1.5
USH2A-204ENST00000481786 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
USH2A-204ENST00000481786 MSTNO14793 375 aa5.65□□□□□ -1.5
USH2A-204ENST00000481786 ADAMTS2O95450 1211 aa5.65□□□□□ -1.5
USH2A-204ENST00000481786 FSHRP23945 695 aa5.65□□□□□ -1.5
USH2A-204ENST00000481786 AGERQ15109 404 aa5.65□□□□□ -1.5
USH2A-204ENST00000481786 LYPD8Q6UX82 237 aa5.65□□□□□ -1.5
USH2A-204ENST00000481786 TSEN34Q9BSV6 310 aaKnown RBP5.65□□□□□ -1.5
USH2A-204ENST00000481786 CNTNAP5Q8WYK1 1306 aa5.65□□□□□ -1.51
USH2A-204ENST00000481786 CFAP99D6REC4 459 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 SPTLC1O15269 473 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 F12P00748 615 aaPredicted RBP5.64□□□□□ -1.51
USH2A-204ENST00000481786 PROCP04070 461 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 ITGA6P23229 1130 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 MTMR2Q13614 643 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 SCARF2Q96GP6 870 aaPredicted RBP5.64□□□□□ -1.51
USH2A-204ENST00000481786 DCAF5Q96JK2 942 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 PSMG3-AS1Q96PY0 264 aa5.64□□□□□ -1.51
USH2A-204ENST00000481786 PER1O15534 1290 aaPredicted RBP5.63□□□□□ -1.51
USH2A-204ENST00000481786 CELA2BP08218 269 aaPredicted RBP5.63□□□□□ -1.51
USH2A-204ENST00000481786 CLCN1P35523 988 aa5.63□□□□□ -1.51
USH2A-204ENST00000481786 DESI1Q6ICB0 168 aa5.63□□□□□ -1.51
USH2A-204ENST00000481786 SV2AQ7L0J3 742 aa5.63□□□□□ -1.51
USH2A-204ENST00000481786 SH3RF1Q7Z6J0 888 aa5.63□□□□□ -1.51
USH2A-204ENST00000481786 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
USH2A-204ENST00000481786 MINK1Q8N4C8 1332 aaPredicted RBP5.63□□□□□ -1.51
USH2A-204ENST00000481786 SSTR3P32745 418 aaPredicted RBP5.62□□□□□ -1.51
USH2A-204ENST00000481786 CTSOP43234 321 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms