RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 WNT7BP56706 349 aa11.17□□□□□ -0.62
PTPN12-211ENST00000481154 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
PTPN12-211ENST00000481154 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
PTPN12-211ENST00000481154 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
PTPN12-211ENST00000481154 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
PTPN12-211ENST00000481154 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
PTPN12-211ENST00000481154 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
PTPN12-211ENST00000481154 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
PTPN12-211ENST00000481154 SKIV2LQ15477 1246 aaKnown RBP11.15□□□□□ -0.62
PTPN12-211ENST00000481154 BAP1Q92560 729 aa11.15□□□□□ -0.62
PTPN12-211ENST00000481154 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
PTPN12-211ENST00000481154 SH3BP2P78314 561 aa11.14□□□□□ -0.63
PTPN12-211ENST00000481154 LCE2AQ5TA79 106 aaPredicted RBP11.14□□□□□ -0.63
PTPN12-211ENST00000481154 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
PTPN12-211ENST00000481154 J3QL48 77 aa11.12□□□□□ -0.63
PTPN12-211ENST00000481154 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-211ENST00000481154 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
PTPN12-211ENST00000481154 HELBQ8NG08 1087 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-211ENST00000481154 SMPD1P17405 629 aa11.11□□□□□ -0.63
PTPN12-211ENST00000481154 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
PTPN12-211ENST00000481154 AVPP01185 164 aa11.1□□□□□ -0.63
PTPN12-211ENST00000481154 ZNF511Q8NB15 262 aa11.1□□□□□ -0.63
PTPN12-211ENST00000481154 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
PTPN12-211ENST00000481154 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTPN12-211ENST00000481154 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
PTPN12-211ENST00000481154 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
PTPN12-211ENST00000481154 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
PTPN12-211ENST00000481154 SIAH2O43255 324 aa11.06□□□□□ -0.64
PTPN12-211ENST00000481154 FOXJ1Q92949 421 aa11.06□□□□□ -0.64
PTPN12-211ENST00000481154 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
PTPN12-211ENST00000481154 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
PTPN12-211ENST00000481154 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
PTPN12-211ENST00000481154 HPS1Q92902 700 aa11.04□□□□□ -0.64
PTPN12-211ENST00000481154 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
PTPN12-211ENST00000481154 AXIN1O15169 862 aa11.02□□□□□ -0.65
PTPN12-211ENST00000481154 AP1G2O75843 785 aa11.02□□□□□ -0.65
PTPN12-211ENST00000481154 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
PTPN12-211ENST00000481154 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
PTPN12-211ENST00000481154 AGERQ15109 404 aa11□□□□□ -0.65
PTPN12-211ENST00000481154 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
PTPN12-211ENST00000481154 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
PTPN12-211ENST00000481154 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
PTPN12-211ENST00000481154 WASF2Q9Y6W5 498 aa10.99□□□□□ -0.65
PTPN12-211ENST00000481154 RFC5P40937 340 aa10.98□□□□□ -0.65
PTPN12-211ENST00000481154 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
PTPN12-211ENST00000481154 NR6A1Q15406 480 aa10.97□□□□□ -0.65
PTPN12-211ENST00000481154 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
PTPN12-211ENST00000481154 ARMC2Q8NEN0 867 aa10.96□□□□□ -0.65
PTPN12-211ENST00000481154 FAM174AQ8TBP5 190 aa10.96□□□□□ -0.65
PTPN12-211ENST00000481154 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
PTPN12-211ENST00000481154 ARID5BQ14865 1188 aa10.95□□□□□ -0.66
PTPN12-211ENST00000481154 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
PTPN12-211ENST00000481154 BPHLQ86WA6 291 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-211ENST00000481154 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
PTPN12-211ENST00000481154 HMX1Q9NP08 348 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-211ENST00000481154 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
PTPN12-211ENST00000481154 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
PTPN12-211ENST00000481154 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
PTPN12-211ENST00000481154 WFS1O76024 890 aa10.93□□□□□ -0.66
PTPN12-211ENST00000481154 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
PTPN12-211ENST00000481154 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
PTPN12-211ENST00000481154 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
PTPN12-211ENST00000481154 FKBPLQ9UIM3 349 aa10.92□□□□□ -0.66
PTPN12-211ENST00000481154 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
PTPN12-211ENST00000481154 NNTQ13423 1086 aa10.91□□□□□ -0.66
PTPN12-211ENST00000481154 ATP13A2Q9NQ11 1180 aa10.91□□□□□ -0.66
PTPN12-211ENST00000481154 ADH1CP00326 375 aa10.9□□□□□ -0.66
PTPN12-211ENST00000481154 MPNDQ8N594 471 aa10.9□□□□□ -0.66
PTPN12-211ENST00000481154 CDK15Q96Q40 435 aa10.89□□□□□ -0.67
PTPN12-211ENST00000481154 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
PTPN12-211ENST00000481154 CAPN5O15484 640 aaPredicted RBP10.88□□□□□ -0.67
PTPN12-211ENST00000481154 BMP1P13497 986 aa10.88□□□□□ -0.67
PTPN12-211ENST00000481154 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
PTPN12-211ENST00000481154 ARHGAP9Q9BRR9 750 aa10.87□□□□□ -0.67
PTPN12-211ENST00000481154 NR3C2P08235 984 aa10.86□□□□□ -0.67
PTPN12-211ENST00000481154 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
PTPN12-211ENST00000481154 PDXDC2PQ6P474 469 aa10.86□□□□□ -0.67
PTPN12-211ENST00000481154 FSHRP23945 695 aa10.85□□□□□ -0.67
PTPN12-211ENST00000481154 GRM5P41594 1212 aa10.85□□□□□ -0.67
PTPN12-211ENST00000481154 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
PTPN12-211ENST00000481154 TMEM259Q4ZIN3 620 aa10.85□□□□□ -0.67
PTPN12-211ENST00000481154 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
PTPN12-211ENST00000481154 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
PTPN12-211ENST00000481154 WIPF1O43516 503 aa10.84□□□□□ -0.67
PTPN12-211ENST00000481154 TIMP2P16035 220 aa10.84□□□□□ -0.67
PTPN12-211ENST00000481154 VASH1Q7L8A9 365 aaPredicted RBP10.84□□□□□ -0.67
PTPN12-211ENST00000481154 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
PTPN12-211ENST00000481154 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
PTPN12-211ENST00000481154 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
PTPN12-211ENST00000481154 ZC3H4Q9UPT8 1303 aaKnown RBP10.83□□□□□ -0.68
PTPN12-211ENST00000481154 ZBTB33Q86T24 672 aa10.82□□□□□ -0.68
PTPN12-211ENST00000481154 KLF16Q9BXK1 252 aaPredicted RBP10.82□□□□□ -0.68
PTPN12-211ENST00000481154 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
PTPN12-211ENST00000481154 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
PTPN12-211ENST00000481154 NR5A1Q13285 461 aa10.81□□□□□ -0.68
PTPN12-211ENST00000481154 ITPKCQ96DU7 683 aa10.81□□□□□ -0.68
PTPN12-211ENST00000481154 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
PTPN12-211ENST00000481154 TERTO14746 1132 aaKnown RBP10.8□□□□□ -0.68
PTPN12-211ENST00000481154 PTK2Q05397 1052 aa10.8□□□□□ -0.68
PTPN12-211ENST00000481154 SLC10A4Q96EP9 437 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms