RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 CALR3Q96L12 384 aaKnown RBP16.69■□□□□ 0.26
CUL3-209ENST00000481135 PRDM9Q9NQV7 894 aa16.69■□□□□ 0.26
CUL3-209ENST00000481135 GPR37L1O60883 481 aa16.68■□□□□ 0.26
CUL3-209ENST00000481135 MAP10Q9P2G4 905 aa16.68■□□□□ 0.26
CUL3-209ENST00000481135 KCNH2Q12809 1159 aa16.67■□□□□ 0.26
CUL3-209ENST00000481135 POM121CA8CG34 1229 aa16.65■□□□□ 0.26
CUL3-209ENST00000481135 VAC14Q08AM6 782 aa16.65■□□□□ 0.26
CUL3-209ENST00000481135 SOX11P35716 441 aa16.64■□□□□ 0.25
CUL3-209ENST00000481135 GLMNQ92990 594 aa16.64■□□□□ 0.25
CUL3-209ENST00000481135 SPNS2Q8IVW8 549 aa16.63■□□□□ 0.25
CUL3-209ENST00000481135 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
CUL3-209ENST00000481135 GPKOWQ92917 476 aaPredicted RBP eCLIP16.63■□□□□ 0.25
CUL3-209ENST00000481135 KCNC4Q03721 635 aa16.62■□□□□ 0.25
CUL3-209ENST00000481135 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
CUL3-209ENST00000481135 NR1H3Q13133 447 aa16.6■□□□□ 0.25
CUL3-209ENST00000481135 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
CUL3-209ENST00000481135 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
CUL3-209ENST00000481135 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
CUL3-209ENST00000481135 NKX2-3Q8TAU0 364 aa16.58■□□□□ 0.24
CUL3-209ENST00000481135 S1PR4O95977 384 aa16.57■□□□□ 0.24
CUL3-209ENST00000481135 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
CUL3-209ENST00000481135 GPSM3Q9Y4H4 160 aa16.57■□□□□ 0.24
CUL3-209ENST00000481135 PTK2Q05397 1052 aa16.56■□□□□ 0.24
CUL3-209ENST00000481135 PDXDC2PQ6P474 469 aa16.56■□□□□ 0.24
CUL3-209ENST00000481135 ITGBL1O95965 494 aaPredicted RBP16.55■□□□□ 0.24
CUL3-209ENST00000481135 ZNF592Q92610 1267 aa16.55■□□□□ 0.24
CUL3-209ENST00000481135 UNC93B1Q9H1C4 597 aa16.55■□□□□ 0.24
CUL3-209ENST00000481135 GGCXP38435 758 aa16.54■□□□□ 0.24
CUL3-209ENST00000481135 ALG2Q9H553 416 aa16.53■□□□□ 0.24
CUL3-209ENST00000481135 FBXO45P0C2W1 286 aa16.52■□□□□ 0.24
CUL3-209ENST00000481135 FCF1Q9Y324 198 aaKnown RBP16.52■□□□□ 0.24
CUL3-209ENST00000481135 PTCRAQ6ISU1 281 aaPredicted RBP16.49■□□□□ 0.23
CUL3-209ENST00000481135 ADAMTS19Q8TE59 1207 aa16.49■□□□□ 0.23
CUL3-209ENST00000481135 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
CUL3-209ENST00000481135 ARHGAP9Q9BRR9 750 aa16.46■□□□□ 0.23
CUL3-209ENST00000481135 ZBTB24O43167 697 aaPredicted RBP16.45■□□□□ 0.22
CUL3-209ENST00000481135 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
CUL3-209ENST00000481135 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
CUL3-209ENST00000481135 BPHLQ86WA6 291 aaPredicted RBP16.41■□□□□ 0.22
CUL3-209ENST00000481135 BAP1Q92560 729 aa16.41■□□□□ 0.22
CUL3-209ENST00000481135 AGERQ15109 404 aa16.4■□□□□ 0.22
CUL3-209ENST00000481135 SH3BP5LQ7L8J4 393 aa16.4■□□□□ 0.22
CUL3-209ENST00000481135 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
CUL3-209ENST00000481135 RNF223E7ERA6 249 aa16.39■□□□□ 0.21
CUL3-209ENST00000481135 PPEF1O14829 653 aaPredicted RBP16.39■□□□□ 0.21
CUL3-209ENST00000481135 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
CUL3-209ENST00000481135 ZNF511Q8NB15 262 aa16.38■□□□□ 0.21
CUL3-209ENST00000481135 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
CUL3-209ENST00000481135 PCDHB9Q9Y5E1 797 aa16.38■□□□□ 0.21
CUL3-209ENST00000481135 LINC01559Q495D7 138 aa16.37■□□□□ 0.21
CUL3-209ENST00000481135 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.37■□□□□ 0.21
CUL3-209ENST00000481135 MMRN1Q13201 1228 aa16.36■□□□□ 0.21
CUL3-209ENST00000481135 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
CUL3-209ENST00000481135 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
CUL3-209ENST00000481135 OCSTAMPQ9BR26 566 aa16.35■□□□□ 0.21
CUL3-209ENST00000481135 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
CUL3-209ENST00000481135 PPP1R18Q6NYC8 613 aa16.34■□□□□ 0.21
CUL3-209ENST00000481135 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CUL3-209ENST00000481135 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
CUL3-209ENST00000481135 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
CUL3-209ENST00000481135 SH3RF1Q7Z6J0 888 aa16.33■□□□□ 0.2
CUL3-209ENST00000481135 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
CUL3-209ENST00000481135 UCN2Q96RP3 112 aa16.33■□□□□ 0.2
CUL3-209ENST00000481135 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
CUL3-209ENST00000481135 RFX1P22670 979 aa16.31■□□□□ 0.2
CUL3-209ENST00000481135 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
CUL3-209ENST00000481135 FOXJ1Q92949 421 aa16.31■□□□□ 0.2
CUL3-209ENST00000481135 PBXIP1Q96AQ6 731 aa16.31■□□□□ 0.2
CUL3-209ENST00000481135 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
CUL3-209ENST00000481135 ATP9BO43861 1147 aa16.3■□□□□ 0.2
CUL3-209ENST00000481135 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
CUL3-209ENST00000481135 RPIAP49247 311 aa16.3■□□□□ 0.2
CUL3-209ENST00000481135 TRIM32Q13049 653 aa16.3■□□□□ 0.2
CUL3-209ENST00000481135 SH3BP2P78314 561 aa16.29■□□□□ 0.2
CUL3-209ENST00000481135 WNT7BP56706 349 aa16.28■□□□□ 0.2
CUL3-209ENST00000481135 TBC1D9Q6ZT07 1266 aa16.28■□□□□ 0.2
CUL3-209ENST00000481135 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
CUL3-209ENST00000481135 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
CUL3-209ENST00000481135 SLC10A4Q96EP9 437 aa16.27■□□□□ 0.2
CUL3-209ENST00000481135 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
CUL3-209ENST00000481135 CDV3Q9UKY7 258 aaKnown RBP16.26■□□□□ 0.19
CUL3-209ENST00000481135 MAFBQ9Y5Q3 323 aaPredicted RBP16.26■□□□□ 0.19
CUL3-209ENST00000481135 SKIP12755 728 aa16.25■□□□□ 0.19
CUL3-209ENST00000481135 PLA2G2CQ5R387 149 aa16.25■□□□□ 0.19
CUL3-209ENST00000481135 RNF135Q8IUD6 432 aa16.25■□□□□ 0.19
CUL3-209ENST00000481135 VARSP26640 1264 aaKnown RBP16.22■□□□□ 0.19
CUL3-209ENST00000481135 NBPF20Q3BBV1 942 aa16.22■□□□□ 0.19
CUL3-209ENST00000481135 C4orf48Q5BLP8 95 aa16.22■□□□□ 0.19
CUL3-209ENST00000481135 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
CUL3-209ENST00000481135 C1QTNF2Q9BXJ5 285 aa16.22■□□□□ 0.19
CUL3-209ENST00000481135 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.21■□□□□ 0.19
CUL3-209ENST00000481135 PIK3CDO00329 1044 aa16.21■□□□□ 0.19
CUL3-209ENST00000481135 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
CUL3-209ENST00000481135 PDE4CQ08493 712 aa16.21■□□□□ 0.19
CUL3-209ENST00000481135 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
CUL3-209ENST00000481135 FAM174AQ8TBP5 190 aa16.21■□□□□ 0.19
CUL3-209ENST00000481135 LZTS3O60299 673 aaPredicted RBP16.2■□□□□ 0.18
CUL3-209ENST00000481135 MAP7D1Q3KQU3 841 aa16.2■□□□□ 0.18
CUL3-209ENST00000481135 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
CUL3-209ENST00000481135 USP17L5A8MUK1 530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms