RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-210	ENST00000480956	PIK3R5	Q8WYR1	880 aa		11.26	□□□□□ -0.61
LSM5-210	ENST00000480956	TRIM34	Q9BYJ4	488 aa		11.26	□□□□□ -0.61
LSM5-210	ENST00000480956	MOXD2P	A6NHM9	499 aa		11.25	□□□□□ -0.61
LSM5-210	ENST00000480956	POTEE	Q6S8J3	1075 aa		11.25	□□□□□ -0.61
LSM5-210	ENST00000480956	EXOC8	Q8IYI6	725 aa		11.25	□□□□□ -0.61
LSM5-210	ENST00000480956	HMX1	Q9NP08	348 aa	Predicted RBP	11.25	□□□□□ -0.61
LSM5-210	ENST00000480956	PCDHGA10	Q9Y5H3	936 aa		11.25	□□□□□ -0.61
LSM5-210	ENST00000480956	FAM205C	A6NFA0	338 aa		11.24	□□□□□ -0.61
LSM5-210	ENST00000480956	GJA5	P36382	358 aa		11.24	□□□□□ -0.61
LSM5-210	ENST00000480956	NUTM1	Q86Y26	1132 aa		11.24	□□□□□ -0.61
LSM5-210	ENST00000480956	HS3ST6	Q96QI5	342 aa		11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	BACH2	Q9BYV9	841 aa		11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	PCDHB15	Q9Y5E8	787 aa		11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	SCAMP3	O14828	347 aa	Known RBP	11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	HDLBP	Q00341	1268 aa	Known RBP	11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	VARS2	Q5ST30	1063 aa	Known RBP	11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	LARGE2	Q8N3Y3	721 aa		11.23	□□□□□ -0.61
LSM5-210	ENST00000480956	IGBP1	P78318	339 aa		11.22	□□□□□ -0.61
LSM5-210	ENST00000480956	CCDC181	Q5TID7	509 aa		11.22	□□□□□ -0.61
LSM5-210	ENST00000480956	GPATCH3	Q96I76	525 aa		11.22	□□□□□ -0.61
LSM5-210	ENST00000480956	hCG_2014768	A0A024R1R8	64 aa		11.21	□□□□□ -0.61
LSM5-210	ENST00000480956	C9orf131	Q5VYM1	1079 aa		11.21	□□□□□ -0.61
LSM5-210	ENST00000480956	SLAIN2	Q9P270	581 aa		11.21	□□□□□ -0.61
LSM5-210	ENST00000480956	IRX6	P78412	446 aa	Predicted RBP	11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	EGFLAM	Q63HQ2	1017 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	SDE2	Q6IQ49	451 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	POTEG	Q6S5H5	508 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	CABLES1	Q8TDN4	633 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	JPH4	Q96JJ6	628 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	SLC52A1	Q9NWF4	448 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	ADGRG1	Q9Y653	693 aa		11.21	□□□□□ -0.62
LSM5-210	ENST00000480956	ERBB3	P21860	1342 aa		11.2	□□□□□ -0.62
LSM5-210	ENST00000480956	POTEM	A6NI47	508 aa		11.2	□□□□□ -0.62
LSM5-210	ENST00000480956	PRPF38B	Q5VTL8	546 aa	Known RBP	11.2	□□□□□ -0.62
LSM5-210	ENST00000480956	CLP1	Q92989	425 aa	Known RBP	11.2	□□□□□ -0.62
LSM5-210	ENST00000480956	NDUFV2	P19404	249 aa		11.19	□□□□□ -0.62
LSM5-210	ENST00000480956	CCDC144B	Q3MJ40	725 aa		11.19	□□□□□ -0.62
LSM5-210	ENST00000480956	PRKAG2	Q9UGJ0	569 aa		11.19	□□□□□ -0.62
LSM5-210	ENST00000480956	PHF14	O94880	888 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	ATP2B4	P23634	1241 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	PTPRO	Q16827	1216 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	ZNF454	Q8N9F8	522 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	DHX38	Q92620	1227 aa	Known RBP	11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	KLHL42	Q9P2K6	505 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	LZTS3	O60299	673 aa	Predicted RBP	11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	ATP2B1	P20020	1258 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	ADAM33	Q9BZ11	813 aa		11.18	□□□□□ -0.62
LSM5-210	ENST00000480956	CD46	P15529	392 aa		11.17	□□□□□ -0.62
LSM5-210	ENST00000480956	MAPK1	P28482	360 aa		11.17	□□□□□ -0.62
LSM5-210	ENST00000480956	SPACA7	Q96KW9	195 aa		11.17	□□□□□ -0.62
LSM5-210	ENST00000480956	FAM196B	A6NMK8	535 aa		11.16	□□□□□ -0.62
LSM5-210	ENST00000480956	IBSP	P21815	317 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM5-210	ENST00000480956	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
LSM5-210	ENST00000480956	CTDSPL2	Q05D32	466 aa		11.16	□□□□□ -0.62
LSM5-210	ENST00000480956	EPAS1	Q99814	870 aa		11.16	□□□□□ -0.62
LSM5-210	ENST00000480956	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	RAD51AP2	Q09MP3	1159 aa		11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	KCNB2	Q92953	911 aa		11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	RBM33	Q96EV2	1170 aa	Known RBP	11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	ASB16	Q96NS5	453 aa		11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	ZBTB3	Q9H5J0	574 aa		11.15	□□□□□ -0.62
LSM5-210	ENST00000480956	USP17L15	C9J2P7	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L10	C9JJH3	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L13	C9JLJ4	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L12	C9JPN9	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L11	C9JVI0	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L21	D6R901	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L18	D6R9N7	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L22	D6RA61	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L17	D6RBQ6	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L19	D6RCP7	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L20	D6RJB6	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L24	Q0WX57	530 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	TINF2	Q9BSI4	451 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	TBX22	Q9Y458	520 aa		11.15	□□□□□ -0.63
LSM5-210	ENST00000480956	FAM69C	Q0P6D2	419 aa		11.14	□□□□□ -0.63
LSM5-210	ENST00000480956	COL19A1	Q14993	1142 aa		11.14	□□□□□ -0.63
LSM5-210	ENST00000480956	EAPP	Q56P03	285 aa	Predicted RBP	11.14	□□□□□ -0.63
LSM5-210	ENST00000480956	PADI6	Q6TGC4	694 aa		11.14	□□□□□ -0.63
LSM5-210	ENST00000480956	ZNF687	Q8N1G0	1237 aa		11.14	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L3	A6NCW0	530 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L4	A6NCW7	530 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	MRPL58	Q14197	206 aa	Known RBP	11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L2	Q6R6M4	530 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	USP17L1	Q7RTZ2	530 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	PNMA1	Q8ND90	353 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	FAM200A	Q8TCP9	573 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	ARMC5	Q96C12	935 aa		11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.13	□□□□□ -0.63
LSM5-210	ENST00000480956	ANAPC15	P60006	121 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	SLC43A3	Q8NBI5	491 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	ZDHHC16	Q969W1	377 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	VTI1A	Q96AJ9	217 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956		H3BRB1	525 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	SCNN1A	P37088	669 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	CRTC2	Q53ET0	693 aa	Predicted RBP	11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	NT5DC4	Q86YG4	428 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	MORC4	Q8TE76	937 aa		11.12	□□□□□ -0.63
LSM5-210	ENST00000480956	TUT1	Q9H6E5	874 aa	Known RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms