RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SLIT2O94813 1529 aa24.25■■□□□ 1.47
HSPG2-209ENST00000480900 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
HSPG2-209ENST00000480900 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
HSPG2-209ENST00000480900 ACEP12821 1306 aa24.24■■□□□ 1.47
HSPG2-209ENST00000480900 EVC2Q86UK5 1308 aa24.24■■□□□ 1.47
HSPG2-209ENST00000480900 RGS12O14924 1447 aa24.22■■□□□ 1.47
HSPG2-209ENST00000480900 SBNO2Q9Y2G9 1366 aa24.22■■□□□ 1.47
HSPG2-209ENST00000480900 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
HSPG2-209ENST00000480900 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
HSPG2-209ENST00000480900 PLEKHG5O94827 1062 aa24.21■■□□□ 1.47
HSPG2-209ENST00000480900 UNC5CLQ8IV45 518 aa24.19■■□□□ 1.46
HSPG2-209ENST00000480900 PHRF1Q9P1Y6 1649 aaKnown RBP24.19■■□□□ 1.46
HSPG2-209ENST00000480900 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
HSPG2-209ENST00000480900 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
HSPG2-209ENST00000480900 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
HSPG2-209ENST00000480900 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
HSPG2-209ENST00000480900 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
HSPG2-209ENST00000480900 NRAPQ86VF7 1730 aa24.15■■□□□ 1.46
HSPG2-209ENST00000480900 GLI3P10071 1580 aa24.14■■□□□ 1.45
HSPG2-209ENST00000480900 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
HSPG2-209ENST00000480900 CABP1Q9NZU7 370 aa24.14■■□□□ 1.45
HSPG2-209ENST00000480900 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.45
HSPG2-209ENST00000480900 USP6P35125 1406 aa24.13■■□□□ 1.45
HSPG2-209ENST00000480900 FAM83GA6ND36 823 aa24.13■■□□□ 1.45
HSPG2-209ENST00000480900 ABTB2Q8N961 1025 aa24.1■■□□□ 1.45
HSPG2-209ENST00000480900 NRKQ7Z2Y5 1582 aa24.1■■□□□ 1.45
HSPG2-209ENST00000480900 VPS72Q15906 364 aa24.09■■□□□ 1.45
HSPG2-209ENST00000480900 TIMELESSQ9UNS1 1208 aa24.09■■□□□ 1.45
HSPG2-209ENST00000480900 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
HSPG2-209ENST00000480900 USP19O94966 1318 aa24.08■■□□□ 1.44
HSPG2-209ENST00000480900 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.44
HSPG2-209ENST00000480900 PRDM11Q9NQV5 511 aa24.07■■□□□ 1.44
HSPG2-209ENST00000480900 SSH2Q76I76 1423 aa24.07■■□□□ 1.44
HSPG2-209ENST00000480900 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
HSPG2-209ENST00000480900 PIK3C2AO00443 1686 aa24.06■■□□□ 1.44
HSPG2-209ENST00000480900 NLRP13Q86W25 1043 aa24.06■■□□□ 1.44
HSPG2-209ENST00000480900 BTG4Q9NY30 223 aa24.06■■□□□ 1.44
HSPG2-209ENST00000480900 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
HSPG2-209ENST00000480900 KIAA0232Q92628 1395 aa24.05■■□□□ 1.44
HSPG2-209ENST00000480900 ZNF692Q9BU19 519 aaPredicted RBP24.05■■□□□ 1.44
HSPG2-209ENST00000480900 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
HSPG2-209ENST00000480900 PUS7Q96PZ0 661 aaKnown RBP24.02■■□□□ 1.44
HSPG2-209ENST00000480900 CPDO75976 1380 aa24.02■■□□□ 1.44
HSPG2-209ENST00000480900 SLIT3O75094 1523 aa24.01■■□□□ 1.43
HSPG2-209ENST00000480900 ZC3H6P61129 1189 aaKnown RBP24.01■■□□□ 1.43
HSPG2-209ENST00000480900 TESK2Q96S53 571 aa24.01■■□□□ 1.43
HSPG2-209ENST00000480900 CCDC9Q9Y3X0 531 aaKnown RBP24.01■■□□□ 1.43
HSPG2-209ENST00000480900 EP400Q96L91 3159 aa24.01■■□□□ 1.43
HSPG2-209ENST00000480900 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
HSPG2-209ENST00000480900 ST20-MTHFSA0A0A6YYL1 179 aa24■■□□□ 1.43
HSPG2-209ENST00000480900 SLC24A1O60721 1099 aa24■■□□□ 1.43
HSPG2-209ENST00000480900 KTN1Q86UP2 1357 aaKnown RBP23.99■■□□□ 1.43
HSPG2-209ENST00000480900 ONECUT3O60422 494 aaPredicted RBP23.98■■□□□ 1.43
HSPG2-209ENST00000480900 GCP02774 474 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 NLRP6P59044 892 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 CHRNA2Q15822 529 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 TTC21BQ7Z4L5 1316 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 TTC21AQ8NDW8 1320 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 USP47Q96K76 1375 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 CD163L1Q9NR16 1453 aa23.98■■□□□ 1.43
HSPG2-209ENST00000480900 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
HSPG2-209ENST00000480900 SPATA31A5Q5VU36 1347 aa23.95■■□□□ 1.42
HSPG2-209ENST00000480900 SPATA31A7Q8IWB4 1347 aa23.95■■□□□ 1.42
HSPG2-209ENST00000480900 SEPT12Q8IYM1 358 aa23.95■■□□□ 1.42
HSPG2-209ENST00000480900 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
HSPG2-209ENST00000480900 NINLQ9Y2I6 1382 aa23.94■■□□□ 1.42
HSPG2-209ENST00000480900 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-209ENST00000480900 TMC1Q8TDI8 760 aa23.94■■□□□ 1.42
HSPG2-209ENST00000480900 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
HSPG2-209ENST00000480900 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
HSPG2-209ENST00000480900 COL18A1P39060 1754 aa23.91■■□□□ 1.42
HSPG2-209ENST00000480900 HDGFL2Q7Z4V5 671 aaPredicted RBP23.91■■□□□ 1.42
HSPG2-209ENST00000480900 FAM98CQ17RN3 349 aaKnown RBP23.9■■□□□ 1.42
HSPG2-209ENST00000480900 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
HSPG2-209ENST00000480900 TERF2IPQ9NYB0 399 aa23.9■■□□□ 1.42
HSPG2-209ENST00000480900 EDC4Q6P2E9 1401 aaKnown RBP23.9■■□□□ 1.42
HSPG2-209ENST00000480900 A0A1W2PP64 1363 aa23.9■■□□□ 1.42
HSPG2-209ENST00000480900 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.42
HSPG2-209ENST00000480900 AATKQ6ZMQ8 1374 aa23.89■■□□□ 1.41
HSPG2-209ENST00000480900 KCNH5Q8NCM2 988 aa23.88■■□□□ 1.41
HSPG2-209ENST00000480900 NFAT5O94916 1531 aa23.88■■□□□ 1.41
HSPG2-209ENST00000480900 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
HSPG2-209ENST00000480900 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
HSPG2-209ENST00000480900 A0A0G2JS52 829 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 EVA1CP58658 441 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 TMF1P82094 1093 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 MYT1Q01538 1121 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 KRT27Q7Z3Y8 459 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 RGPD5Q99666 1765 aa23.87■■□□□ 1.41
HSPG2-209ENST00000480900 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
HSPG2-209ENST00000480900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
HSPG2-209ENST00000480900 ABCC6O95255 1503 aa23.84■■□□□ 1.41
HSPG2-209ENST00000480900 LARP1Q6PKG0 1096 aaKnown RBP23.83■■□□□ 1.41
HSPG2-209ENST00000480900 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
HSPG2-209ENST00000480900 LTN1O94822 1766 aa23.83■■□□□ 1.4
HSPG2-209ENST00000480900 ZBTB7CA1YPR0 619 aa23.82■■□□□ 1.4
HSPG2-209ENST00000480900 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
HSPG2-209ENST00000480900 NME9Q86XW9 330 aa23.82■■□□□ 1.4
HSPG2-209ENST00000480900 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
HSPG2-209ENST00000480900 BARGINQ6ZT62 677 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms