RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
NUDCD3-208ENST00000480209 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-208ENST00000480209 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
NUDCD3-208ENST00000480209 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.43
NUDCD3-208ENST00000480209 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
NUDCD3-208ENST00000480209 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-208ENST00000480209 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
NUDCD3-208ENST00000480209 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
NUDCD3-208ENST00000480209 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
NUDCD3-208ENST00000480209 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
NUDCD3-208ENST00000480209 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
NUDCD3-208ENST00000480209 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
NUDCD3-208ENST00000480209 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-208ENST00000480209 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
NUDCD3-208ENST00000480209 FOXO3O43524 673 aa12.31□□□□□ -0.44
NUDCD3-208ENST00000480209 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
NUDCD3-208ENST00000480209 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 NME9Q86XW9 330 aa12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 LTN1O94822 1766 aa12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-208ENST00000480209 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 SLIT3O75094 1523 aa12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 KNSTRNQ9Y448 316 aa12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 NSD2O96028 1365 aa12.29□□□□□ -0.44
NUDCD3-208ENST00000480209 FYB1O15117 783 aa12.28□□□□□ -0.44
NUDCD3-208ENST00000480209 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-208ENST00000480209 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-208ENST00000480209 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
NUDCD3-208ENST00000480209 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-208ENST00000480209 NFAT5O94916 1531 aa12.27□□□□□ -0.44
NUDCD3-208ENST00000480209 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
NUDCD3-208ENST00000480209 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-208ENST00000480209 NPHP3Q7Z494 1330 aa12.27□□□□□ -0.45
NUDCD3-208ENST00000480209 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
NUDCD3-208ENST00000480209 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
NUDCD3-208ENST00000480209 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 PSME1Q06323 249 aa12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
NUDCD3-208ENST00000480209 TOM1O60784 492 aa12.25□□□□□ -0.45
NUDCD3-208ENST00000480209 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
NUDCD3-208ENST00000480209 MIER1Q8N108 512 aa12.25□□□□□ -0.45
NUDCD3-208ENST00000480209 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-208ENST00000480209 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
NUDCD3-208ENST00000480209 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
NUDCD3-208ENST00000480209 ANP32CO43423 234 aa12.23□□□□□ -0.45
NUDCD3-208ENST00000480209 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
NUDCD3-208ENST00000480209 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-208ENST00000480209 USP19O94966 1318 aa12.22□□□□□ -0.45
NUDCD3-208ENST00000480209 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-208ENST00000480209 FBLN1P23142 703 aa12.22□□□□□ -0.45
NUDCD3-208ENST00000480209 COL18A1P39060 1754 aa12.22□□□□□ -0.45
NUDCD3-208ENST00000480209 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-208ENST00000480209 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
NUDCD3-208ENST00000480209 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
NUDCD3-208ENST00000480209 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
NUDCD3-208ENST00000480209 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 NLRP6P59044 892 aa12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 RALBP1Q15311 655 aa12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 COG3Q96JB2 828 aa12.2□□□□□ -0.46
NUDCD3-208ENST00000480209 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
NUDCD3-208ENST00000480209 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
NUDCD3-208ENST00000480209 LMO7Q8WWI1 1683 aa12.19□□□□□ -0.46
NUDCD3-208ENST00000480209 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
NUDCD3-208ENST00000480209 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
NUDCD3-208ENST00000480209 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
NUDCD3-208ENST00000480209 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
NUDCD3-208ENST00000480209 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-208ENST00000480209 PLCH1Q4KWH8 1693 aa12.17□□□□□ -0.46
NUDCD3-208ENST00000480209 SOX12O15370 315 aa12.17□□□□□ -0.46
NUDCD3-208ENST00000480209 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
NUDCD3-208ENST00000480209 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-208ENST00000480209 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
NUDCD3-208ENST00000480209 NLRP13Q86W25 1043 aa12.15□□□□□ -0.46
NUDCD3-208ENST00000480209 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.46
NUDCD3-208ENST00000480209 ABCC6O95255 1503 aa12.15□□□□□ -0.46
NUDCD3-208ENST00000480209 NRAPQ86VF7 1730 aa12.14□□□□□ -0.47
NUDCD3-208ENST00000480209 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
NUDCD3-208ENST00000480209 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
NUDCD3-208ENST00000480209 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-208ENST00000480209 LRP6O75581 1613 aa12.14□□□□□ -0.47
NUDCD3-208ENST00000480209 CCER2I3L3R5 266 aa12.13□□□□□ -0.47
NUDCD3-208ENST00000480209 GCP02774 474 aa12.13□□□□□ -0.47
NUDCD3-208ENST00000480209 HSPA1LP34931 641 aa12.13□□□□□ -0.47
NUDCD3-208ENST00000480209 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-208ENST00000480209 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-208ENST00000480209 MTHFSP49914 203 aa12.12□□□□□ -0.47
NUDCD3-208ENST00000480209 RTL1A6NKG5 1358 aa12.12□□□□□ -0.47
NUDCD3-208ENST00000480209 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms