RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
PBRM1-220ENST00000480064 PRM3Q9NNZ6 103 aa10.22□□□□□ -0.77
PBRM1-220ENST00000480064 TRIM32Q13049 653 aa10.21□□□□□ -0.77
PBRM1-220ENST00000480064 RGS22Q8NE09 1264 aa10.21□□□□□ -0.77
PBRM1-220ENST00000480064 AAASQ9NRG9 546 aa10.21□□□□□ -0.77
PBRM1-220ENST00000480064 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
PBRM1-220ENST00000480064 ST8SIA5O15466 376 aa10.2□□□□□ -0.78
PBRM1-220ENST00000480064 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
PBRM1-220ENST00000480064 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
PBRM1-220ENST00000480064 POTECB2RU33 542 aa10.19□□□□□ -0.78
PBRM1-220ENST00000480064 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
PBRM1-220ENST00000480064 CALR3Q96L12 384 aaKnown RBP10.19□□□□□ -0.78
PBRM1-220ENST00000480064 TTC24A2A3L6 582 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-220ENST00000480064 WNT7AO00755 349 aa10.18□□□□□ -0.78
PBRM1-220ENST00000480064 RFC5P40937 340 aa10.18□□□□□ -0.78
PBRM1-220ENST00000480064 RBM25P49756 843 aaKnown RBP10.18□□□□□ -0.78
PBRM1-220ENST00000480064 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
PBRM1-220ENST00000480064 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
PBRM1-220ENST00000480064 ZNF775Q96BV0 537 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-220ENST00000480064 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
PBRM1-220ENST00000480064 AVPP01185 164 aa10.17□□□□□ -0.78
PBRM1-220ENST00000480064 FDX1P10109 184 aa10.17□□□□□ -0.78
PBRM1-220ENST00000480064 JUNDP17535 347 aa10.17□□□□□ -0.78
PBRM1-220ENST00000480064 IRF5Q13568 498 aa10.16□□□□□ -0.78
PBRM1-220ENST00000480064 RETREG3Q86VR2 466 aa10.16□□□□□ -0.78
PBRM1-220ENST00000480064 CRIPAKQ8N1N5 446 aa10.16□□□□□ -0.78
PBRM1-220ENST00000480064 SNRKQ9NRH2 765 aa10.16□□□□□ -0.78
PBRM1-220ENST00000480064 SNIP1Q8TAD8 396 aaKnown RBP10.15□□□□□ -0.78
PBRM1-220ENST00000480064 SPIRE2Q8WWL2 714 aa10.15□□□□□ -0.78
PBRM1-220ENST00000480064 PCDHGC3Q9UN70 934 aa10.15□□□□□ -0.78
PBRM1-220ENST00000480064 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
PBRM1-220ENST00000480064 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
PBRM1-220ENST00000480064 AXIN1O15169 862 aa10.13□□□□□ -0.79
PBRM1-220ENST00000480064 ABL2P42684 1182 aa10.13□□□□□ -0.79
PBRM1-220ENST00000480064 CTC1Q2NKJ3 1217 aa10.13□□□□□ -0.79
PBRM1-220ENST00000480064 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-220ENST00000480064 FOXD4L4Q8WXT5 416 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-220ENST00000480064 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
PBRM1-220ENST00000480064 GLMNQ92990 594 aa10.12□□□□□ -0.79
PBRM1-220ENST00000480064 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
PBRM1-220ENST00000480064 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 SMPD1P17405 629 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 NDUFV2P19404 249 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 SMCPP49901 116 aaPredicted RBP10.11□□□□□ -0.79
PBRM1-220ENST00000480064 WNT7BP56706 349 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 SKOR1P84550 965 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 RC3H1Q5TC82 1133 aaKnown RBP10.11□□□□□ -0.79
PBRM1-220ENST00000480064 NUDT12Q9BQG2 462 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
PBRM1-220ENST00000480064 KCNA1Q09470 495 aa10.1□□□□□ -0.79
PBRM1-220ENST00000480064 J3QL48 77 aa10.09□□□□□ -0.79
PBRM1-220ENST00000480064 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-220ENST00000480064 CSB-PGBD3P0DP91 1061 aa10.08□□□□□ -0.8
PBRM1-220ENST00000480064 PBXIP1Q96AQ6 731 aa10.08□□□□□ -0.8
PBRM1-220ENST00000480064 USTQ9Y2C2 406 aa10.08□□□□□ -0.8
PBRM1-220ENST00000480064 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
PBRM1-220ENST00000480064 E9PSI1 815 aa10.06□□□□□ -0.8
PBRM1-220ENST00000480064 BRD1O95696 1058 aa10.06□□□□□ -0.8
PBRM1-220ENST00000480064 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
PBRM1-220ENST00000480064 GMPR2Q9P2T1 348 aaKnown RBP10.06□□□□□ -0.8
PBRM1-220ENST00000480064 SOCS7O14512 581 aa10.05□□□□□ -0.8
PBRM1-220ENST00000480064 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
PBRM1-220ENST00000480064 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
PBRM1-220ENST00000480064 MTMR2Q13614 643 aa10.04□□□□□ -0.8
PBRM1-220ENST00000480064 PTPRNQ16849 979 aa10.04□□□□□ -0.8
PBRM1-220ENST00000480064 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
PBRM1-220ENST00000480064 LIMD1Q9UGP4 676 aa10.04□□□□□ -0.8
PBRM1-220ENST00000480064 POM121CA8CG34 1229 aa10.03□□□□□ -0.8
PBRM1-220ENST00000480064 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
PBRM1-220ENST00000480064 HPS1Q92902 700 aa10.03□□□□□ -0.8
PBRM1-220ENST00000480064 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
PBRM1-220ENST00000480064 GJA5P36382 358 aa10.02□□□□□ -0.81
PBRM1-220ENST00000480064 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
PBRM1-220ENST00000480064 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
PBRM1-220ENST00000480064 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
PBRM1-220ENST00000480064 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
PBRM1-220ENST00000480064 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
PBRM1-220ENST00000480064 ZNF428Q96B54 188 aa10.01□□□□□ -0.81
PBRM1-220ENST00000480064 SIAH2O43255 324 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 AP1G2O75843 785 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 SH3BP2P78314 561 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 KCNH2Q12809 1159 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 ATP13A2Q9NQ11 1180 aa10□□□□□ -0.81
PBRM1-220ENST00000480064 RFX1P22670 979 aa9.99□□□□□ -0.81
PBRM1-220ENST00000480064 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
PBRM1-220ENST00000480064 TUSC1Q2TAM9 212 aa9.99□□□□□ -0.81
PBRM1-220ENST00000480064 PCDHB15Q9Y5E8 787 aa9.99□□□□□ -0.81
PBRM1-220ENST00000480064 SPTLC1O15269 473 aa9.98□□□□□ -0.81
PBRM1-220ENST00000480064 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
PBRM1-220ENST00000480064 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
PBRM1-220ENST00000480064 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
PBRM1-220ENST00000480064 BAP1Q92560 729 aa9.97□□□□□ -0.81
PBRM1-220ENST00000480064 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
PBRM1-220ENST00000480064 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
PBRM1-220ENST00000480064 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
PBRM1-220ENST00000480064 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.82
PBRM1-220ENST00000480064 NUTM2BA6NNL0 878 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-220ENST00000480064 NUTM2EB1AL46 878 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms