RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
C9orf78-205ENST00000480023 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
C9orf78-205ENST00000480023 K7ELQ4 463 aaPredicted RBP16.91■□□□□ 0.3
C9orf78-205ENST00000480023 MTHFSP49914 203 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 REREQ9P2R6 1566 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 KIF1BO60333 1816 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 ANP32BQ92688 251 aaKnown RBP16.91■□□□□ 0.3
C9orf78-205ENST00000480023 NSD2O96028 1365 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
C9orf78-205ENST00000480023 SSH1Q8WYL5 1049 aa16.9■□□□□ 0.3
C9orf78-205ENST00000480023 ZNF445P59923 1031 aa16.9■□□□□ 0.3
C9orf78-205ENST00000480023 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
C9orf78-205ENST00000480023 IL16Q14005 1332 aa16.89■□□□□ 0.29
C9orf78-205ENST00000480023 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
C9orf78-205ENST00000480023 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
C9orf78-205ENST00000480023 MSNP26038 577 aaKnown RBP16.88■□□□□ 0.29
C9orf78-205ENST00000480023 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
C9orf78-205ENST00000480023 MED14O60244 1454 aa16.88■□□□□ 0.29
C9orf78-205ENST00000480023 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
C9orf78-205ENST00000480023 RIPK4P57078 832 aa16.88■□□□□ 0.29
C9orf78-205ENST00000480023 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
C9orf78-205ENST00000480023 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
C9orf78-205ENST00000480023 TMEM57Q8N5G2 664 aa16.87■□□□□ 0.29
C9orf78-205ENST00000480023 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
C9orf78-205ENST00000480023 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
C9orf78-205ENST00000480023 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
C9orf78-205ENST00000480023 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
C9orf78-205ENST00000480023 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
C9orf78-205ENST00000480023 SSFA2P28290 1259 aa16.86■□□□□ 0.29
C9orf78-205ENST00000480023 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
C9orf78-205ENST00000480023 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
C9orf78-205ENST00000480023 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
C9orf78-205ENST00000480023 PDLIM2Q96JY6 352 aa16.85■□□□□ 0.29
C9orf78-205ENST00000480023 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
C9orf78-205ENST00000480023 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 SPAG9O60271 1321 aaKnown RBP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
C9orf78-205ENST00000480023 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 U2AF1L5P0DN76 240 aaPredicted RBP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 U2AF1Q01081 240 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
C9orf78-205ENST00000480023 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
C9orf78-205ENST00000480023 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
C9orf78-205ENST00000480023 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
C9orf78-205ENST00000480023 PLEKHF1Q96S99 279 aa16.84■□□□□ 0.29
C9orf78-205ENST00000480023 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
C9orf78-205ENST00000480023 ADGRB1O14514 1584 aa16.83■□□□□ 0.29
C9orf78-205ENST00000480023 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.29
C9orf78-205ENST00000480023 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
C9orf78-205ENST00000480023 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
C9orf78-205ENST00000480023 BRPF1P55201 1214 aaPredicted RBP16.82■□□□□ 0.28
C9orf78-205ENST00000480023 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 FANCAO15360 1455 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
C9orf78-205ENST00000480023 ANKRD36BQ8N2N9 1353 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
C9orf78-205ENST00000480023 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
C9orf78-205ENST00000480023 MTERF4Q7Z6M4 381 aaKnown RBP16.81■□□□□ 0.28
C9orf78-205ENST00000480023 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
C9orf78-205ENST00000480023 PPIP5K1Q6PFW1 1433 aa16.8■□□□□ 0.28
C9orf78-205ENST00000480023 MCM5P33992 734 aa16.8■□□□□ 0.28
C9orf78-205ENST00000480023 NUCB2P80303 420 aa16.8■□□□□ 0.28
C9orf78-205ENST00000480023 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
C9orf78-205ENST00000480023 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
C9orf78-205ENST00000480023 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
C9orf78-205ENST00000480023 ATP7AQ04656 1500 aa16.79■□□□□ 0.28
C9orf78-205ENST00000480023 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
C9orf78-205ENST00000480023 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
C9orf78-205ENST00000480023 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
C9orf78-205ENST00000480023 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
C9orf78-205ENST00000480023 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
C9orf78-205ENST00000480023 RABEP1Q15276 862 aa16.78■□□□□ 0.28
C9orf78-205ENST00000480023 PPLO60437 1756 aa16.77■□□□□ 0.28
C9orf78-205ENST00000480023 CSPP1Q1MSJ5 1256 aa16.77■□□□□ 0.28
C9orf78-205ENST00000480023 CFAP44Q96MT7 982 aa16.77■□□□□ 0.28
C9orf78-205ENST00000480023 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.28
C9orf78-205ENST00000480023 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.28
C9orf78-205ENST00000480023 CDC45O75419 566 aa16.76■□□□□ 0.27
C9orf78-205ENST00000480023 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
C9orf78-205ENST00000480023 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
C9orf78-205ENST00000480023 ZCCHC11Q5TAX3 1644 aaKnown RBP16.76■□□□□ 0.27
C9orf78-205ENST00000480023 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
C9orf78-205ENST00000480023 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-205ENST00000480023 ANKRD45Q5TZF3 282 aa16.76■□□□□ 0.27
C9orf78-205ENST00000480023 RBSNQ9H1K0 784 aa16.76■□□□□ 0.27
C9orf78-205ENST00000480023 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
C9orf78-205ENST00000480023 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
C9orf78-205ENST00000480023 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
C9orf78-205ENST00000480023 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
C9orf78-205ENST00000480023 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
C9orf78-205ENST00000480023 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 UQCRHLA0A096LP55 91 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 UQCRHP07919 91 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms