RNA–Protein interactions for RNA: ENST00000479960.1

ATP1A1-207, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 611 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-207ENST00000479960 COG3Q96JB2 828 aa16.56■□□□□ 0.24
ATP1A1-207ENST00000479960 POLR3AO14802 1390 aaPredicted RBP16.55■□□□□ 0.24
ATP1A1-207ENST00000479960 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
ATP1A1-207ENST00000479960 TTC21AQ8NDW8 1320 aa16.55■□□□□ 0.24
ATP1A1-207ENST00000479960 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
ATP1A1-207ENST00000479960 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
ATP1A1-207ENST00000479960 USP6P35125 1406 aa16.54■□□□□ 0.24
ATP1A1-207ENST00000479960 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
ATP1A1-207ENST00000479960 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
ATP1A1-207ENST00000479960 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
ATP1A1-207ENST00000479960 XIRP1Q702N8 1843 aaKnown RBP16.53■□□□□ 0.24
ATP1A1-207ENST00000479960 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
ATP1A1-207ENST00000479960 C1orf167Q5SNV9 1468 aa16.52■□□□□ 0.23
ATP1A1-207ENST00000479960 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATP1A1-207ENST00000479960 NME9Q86XW9 330 aa16.51■□□□□ 0.23
ATP1A1-207ENST00000479960 ORAI2Q96SN7 254 aa16.51■□□□□ 0.23
ATP1A1-207ENST00000479960 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
ATP1A1-207ENST00000479960 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 NRKQ7Z2Y5 1582 aa16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 MST1RQ04912 1400 aa16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 FOXO3O43524 673 aa16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 MTHFSP49914 203 aa16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
ATP1A1-207ENST00000479960 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
ATP1A1-207ENST00000479960 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
ATP1A1-207ENST00000479960 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
ATP1A1-207ENST00000479960 NLRP6P59044 892 aa16.46■□□□□ 0.23
ATP1A1-207ENST00000479960 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
ATP1A1-207ENST00000479960 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
ATP1A1-207ENST00000479960 NPHP3Q7Z494 1330 aa16.45■□□□□ 0.22
ATP1A1-207ENST00000479960 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
ATP1A1-207ENST00000479960 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATP1A1-207ENST00000479960 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
ATP1A1-207ENST00000479960 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
ATP1A1-207ENST00000479960 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
ATP1A1-207ENST00000479960 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
ATP1A1-207ENST00000479960 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
ATP1A1-207ENST00000479960 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
ATP1A1-207ENST00000479960 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
ATP1A1-207ENST00000479960 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
ATP1A1-207ENST00000479960 OVOS2A0A0J9YW53 1432 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 OVOS2Q6IE36 1432 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 SOX12O15370 315 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 BRINP3Q76B58 766 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
ATP1A1-207ENST00000479960 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
ATP1A1-207ENST00000479960 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
ATP1A1-207ENST00000479960 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
ATP1A1-207ENST00000479960 INSRP06213 1382 aa16.38■□□□□ 0.21
ATP1A1-207ENST00000479960 AMPHP49418 695 aa16.37■□□□□ 0.21
ATP1A1-207ENST00000479960 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
ATP1A1-207ENST00000479960 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
ATP1A1-207ENST00000479960 TOM1O60784 492 aa16.36■□□□□ 0.21
ATP1A1-207ENST00000479960 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
ATP1A1-207ENST00000479960 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
ATP1A1-207ENST00000479960 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
ATP1A1-207ENST00000479960 FBLN1P23142 703 aa16.35■□□□□ 0.21
ATP1A1-207ENST00000479960 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATP1A1-207ENST00000479960 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
ATP1A1-207ENST00000479960 NEFMP07197 916 aa16.34■□□□□ 0.21
ATP1A1-207ENST00000479960 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
ATP1A1-207ENST00000479960 FBXO41Q8TF61 875 aa16.33■□□□□ 0.2
ATP1A1-207ENST00000479960 DDX17Q92841 729 aaKnown RBP16.33■□□□□ 0.2
ATP1A1-207ENST00000479960 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
ATP1A1-207ENST00000479960 SOCS7O14512 581 aa16.32■□□□□ 0.2
ATP1A1-207ENST00000479960 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
ATP1A1-207ENST00000479960 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
ATP1A1-207ENST00000479960 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
ATP1A1-207ENST00000479960 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
ATP1A1-207ENST00000479960 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
ATP1A1-207ENST00000479960 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
ATP1A1-207ENST00000479960 SPATA31A3Q5VYP0 1347 aa16.31■□□□□ 0.2
ATP1A1-207ENST00000479960 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 PXDNQ92626 1479 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 FLT4P35916 1363 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 MAP3K19Q56UN5 1328 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 ZBTB7CA1YPR0 619 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 GCP02774 474 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 RUNDC1Q96C34 613 aa16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
ATP1A1-207ENST00000479960 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
ATP1A1-207ENST00000479960 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
ATP1A1-207ENST00000479960 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
ATP1A1-207ENST00000479960 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
ATP1A1-207ENST00000479960 LTN1O94822 1766 aa16.28■□□□□ 0.2
ATP1A1-207ENST00000479960 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
ATP1A1-207ENST00000479960 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
ATP1A1-207ENST00000479960 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
ATP1A1-207ENST00000479960 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.2
ATP1A1-207ENST00000479960 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
ATP1A1-207ENST00000479960 FCHSD2O94868 740 aa16.27■□□□□ 0.2
ATP1A1-207ENST00000479960 IL13P35225 146 aa16.27■□□□□ 0.2
ATP1A1-207ENST00000479960 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.2
ATP1A1-207ENST00000479960 RTL1A6NKG5 1358 aa16.26■□□□□ 0.19
ATP1A1-207ENST00000479960 USP19O94966 1318 aa16.26■□□□□ 0.19
ATP1A1-207ENST00000479960 SLIT3O75094 1523 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms