RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
HMGN1-212ENST00000479586 CAMKK2Q96RR4 588 aa25.93■■□□□ 1.74
HMGN1-212ENST00000479586 MPHOSPH9Q99550 1183 aa25.93■■□□□ 1.74
HMGN1-212ENST00000479586 TRIM37O94972 964 aa25.92■■□□□ 1.74
HMGN1-212ENST00000479586 POGKQ9P215 609 aa25.92■■□□□ 1.74
HMGN1-212ENST00000479586 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
HMGN1-212ENST00000479586 GPRASP1Q5JY77 1395 aa25.92■■□□□ 1.74
HMGN1-212ENST00000479586 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
HMGN1-212ENST00000479586 PRR36Q9H6K5 1346 aa25.89■■□□□ 1.74
HMGN1-212ENST00000479586 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
HMGN1-212ENST00000479586 PRDM11Q9NQV5 511 aa25.89■■□□□ 1.74
HMGN1-212ENST00000479586 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
HMGN1-212ENST00000479586 YY1P25490 414 aa25.87■■□□□ 1.73
HMGN1-212ENST00000479586 APBA3O96018 575 aa25.86■■□□□ 1.73
HMGN1-212ENST00000479586 FAM196AQ6ZSG2 479 aa25.86■■□□□ 1.73
HMGN1-212ENST00000479586 TULP4Q9NRJ4 1543 aa25.85■■□□□ 1.73
HMGN1-212ENST00000479586 RREB1Q92766 1687 aa25.85■■□□□ 1.73
HMGN1-212ENST00000479586 PARD3Q8TEW0 1356 aa25.84■■□□□ 1.73
HMGN1-212ENST00000479586 PAK3O75914 559 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-212ENST00000479586 MINK1Q8N4C8 1332 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-212ENST00000479586 KIAA0232Q92628 1395 aa25.83■■□□□ 1.73
HMGN1-212ENST00000479586 NUP188Q5SRE5 1749 aa25.83■■□□□ 1.73
HMGN1-212ENST00000479586 ADGRB1O14514 1584 aa25.83■■□□□ 1.73
HMGN1-212ENST00000479586 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
HMGN1-212ENST00000479586 STRN4Q9NRL3 753 aa25.82■■□□□ 1.72
HMGN1-212ENST00000479586 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
HMGN1-212ENST00000479586 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
HMGN1-212ENST00000479586 TRAK1Q9UPV9 953 aa25.81■■□□□ 1.72
HMGN1-212ENST00000479586 PHRF1Q9P1Y6 1649 aaKnown RBP25.79■■□□□ 1.72
HMGN1-212ENST00000479586 USP35Q9P2H5 1018 aa25.78■■□□□ 1.72
HMGN1-212ENST00000479586 WASLO00401 505 aaPredicted RBP25.77■■□□□ 1.72
HMGN1-212ENST00000479586 ZC3H6P61129 1189 aaKnown RBP25.75■■□□□ 1.71
HMGN1-212ENST00000479586 SSH2Q76I76 1423 aa25.73■■□□□ 1.71
HMGN1-212ENST00000479586 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
HMGN1-212ENST00000479586 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
HMGN1-212ENST00000479586 NBPF14Q5TI25 921 aa25.73■■□□□ 1.71
HMGN1-212ENST00000479586 NUTM2GQ5VZR2 741 aa25.72■■□□□ 1.71
HMGN1-212ENST00000479586 BARGINQ6ZT62 677 aa25.72■■□□□ 1.71
HMGN1-212ENST00000479586 PPP1R1BQ9UD71 204 aaPredicted RBP25.71■■□□□ 1.71
HMGN1-212ENST00000479586 ATP7BP35670 1465 aa25.71■■□□□ 1.71
HMGN1-212ENST00000479586 ITSN1Q15811 1721 aa25.71■■□□□ 1.71
HMGN1-212ENST00000479586 SPON1Q9HCB6 807 aa25.7■■□□□ 1.7
HMGN1-212ENST00000479586 EVA1CP58658 441 aa25.69■■□□□ 1.7
HMGN1-212ENST00000479586 CAMTA1Q9Y6Y1 1673 aa25.68■■□□□ 1.7
HMGN1-212ENST00000479586 LARP1Q6PKG0 1096 aaKnown RBP25.68■■□□□ 1.7
HMGN1-212ENST00000479586 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
HMGN1-212ENST00000479586 KCNQ2O43526 872 aa25.67■■□□□ 1.7
HMGN1-212ENST00000479586 NRKQ7Z2Y5 1582 aa25.66■■□□□ 1.7
HMGN1-212ENST00000479586 NUDT16Q96DE0 195 aaKnown RBP25.66■■□□□ 1.7
HMGN1-212ENST00000479586 TCP11L2Q8N4U5 519 aa25.65■■□□□ 1.7
HMGN1-212ENST00000479586 LMO7Q8WWI1 1683 aa25.64■■□□□ 1.7
HMGN1-212ENST00000479586 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
HMGN1-212ENST00000479586 DCAF8L1A6NGE4 600 aa25.62■■□□□ 1.69
HMGN1-212ENST00000479586 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
HMGN1-212ENST00000479586 PARP4Q9UKK3 1724 aaKnown RBP25.6■■□□□ 1.69
HMGN1-212ENST00000479586 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
HMGN1-212ENST00000479586 TOPAZ1Q8N9V7 1692 aa25.6■■□□□ 1.69
HMGN1-212ENST00000479586 CPDO75976 1380 aa25.59■■□□□ 1.69
HMGN1-212ENST00000479586 ACEP12821 1306 aa25.59■■□□□ 1.69
HMGN1-212ENST00000479586 DCAF11Q8TEB1 546 aa25.58■■□□□ 1.69
HMGN1-212ENST00000479586 PEAK1Q9H792 1746 aa25.57■■□□□ 1.68
HMGN1-212ENST00000479586 ANO8Q9HCE9 1232 aaPredicted RBP25.57■■□□□ 1.68
HMGN1-212ENST00000479586 THRAP3Q9Y2W1 955 aaKnown RBP25.57■■□□□ 1.68
HMGN1-212ENST00000479586 ABTB2Q8N961 1025 aa25.56■■□□□ 1.68
HMGN1-212ENST00000479586 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
HMGN1-212ENST00000479586 USP19O94966 1318 aa25.56■■□□□ 1.68
HMGN1-212ENST00000479586 RGPD3A6NKT7 1758 aaPredicted RBP25.56■■□□□ 1.68
HMGN1-212ENST00000479586 RGPD4Q7Z3J3 1758 aa25.56■■□□□ 1.68
HMGN1-212ENST00000479586 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
HMGN1-212ENST00000479586 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
HMGN1-212ENST00000479586 OVOS2A0A0G2JMS6 1433 aa25.54■■□□□ 1.68
HMGN1-212ENST00000479586 OVOS2A0A0J9YW53 1432 aa25.54■■□□□ 1.68
HMGN1-212ENST00000479586 OVOS2Q6IE36 1432 aa25.54■■□□□ 1.68
HMGN1-212ENST00000479586 UTRNP46939 3433 aa25.54■■□□□ 1.68
HMGN1-212ENST00000479586 PDGFDQ9GZP0 370 aaPredicted RBP25.53■■□□□ 1.68
HMGN1-212ENST00000479586 SBF2Q86WG5 1849 aa25.53■■□□□ 1.68
HMGN1-212ENST00000479586 LRRC37A3O60309 1634 aa25.52■■□□□ 1.68
HMGN1-212ENST00000479586 PLEKHG3A1L390 1219 aa25.51■■□□□ 1.67
HMGN1-212ENST00000479586 C11orf95C9JLR9 678 aaPredicted RBP25.51■■□□□ 1.67
HMGN1-212ENST00000479586 CCDC61Q9Y6R9 512 aa25.51■■□□□ 1.67
HMGN1-212ENST00000479586 PLSCR1O15162 318 aa25.5■■□□□ 1.67
HMGN1-212ENST00000479586 GCP02774 474 aa25.5■■□□□ 1.67
HMGN1-212ENST00000479586 MYOM1P52179 1685 aa25.5■■□□□ 1.67
HMGN1-212ENST00000479586 CRB1P82279 1406 aa25.5■■□□□ 1.67
HMGN1-212ENST00000479586 PTF1AQ7RTS3 328 aa25.5■■□□□ 1.67
HMGN1-212ENST00000479586 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
HMGN1-212ENST00000479586 ZNF784Q8NCA9 323 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-212ENST00000479586 NLRP13Q86W25 1043 aa25.46■■□□□ 1.67
HMGN1-212ENST00000479586 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
HMGN1-212ENST00000479586 BCL11BQ9C0K0 894 aaPredicted RBP25.45■■□□□ 1.66
HMGN1-212ENST00000479586 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
HMGN1-212ENST00000479586 PTGER2P43116 358 aa25.44■■□□□ 1.66
HMGN1-212ENST00000479586 DDB1Q16531 1140 aa25.44■■□□□ 1.66
HMGN1-212ENST00000479586 PROM2Q8N271 834 aa25.44■■□□□ 1.66
HMGN1-212ENST00000479586 STAC3Q96MF2 364 aa25.44■■□□□ 1.66
HMGN1-212ENST00000479586 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
HMGN1-212ENST00000479586 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
HMGN1-212ENST00000479586 WNK3Q9BYP7 1800 aa25.41■■□□□ 1.66
HMGN1-212ENST00000479586 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
HMGN1-212ENST00000479586 TOM1L2Q6ZVM7 507 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms